TCONS_00062791-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062791-protein
Unique NameTCONS_00062791-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length450

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062791-protein ID=TCONS_00062791-protein|Name=TCONS_00062791-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
MVSQNGFYDYSAAARESDLVTLKQCSKKEANRRDEDGMTPVHWASLYGNF
EALKILINVGGSPDKQNNEGASSLHLAAGNGHLPCLVYLTNFGGNVHALN
DNGGSPMHEAAMKGQLECVRHLEAIVTHQVSQDRSKVEKMQTKAKKDLEK
RNKGREKLLKNMDKSYDRKVDKQRKYFGVPLSANPNNPYNLDGTDKMSYS
QLTGMTNGHHRMNRGNPEEIAEYDSNVDNDSIDSFQRVEEEFLTRNSQIS
DDIVFERPEKSSIRTEQTDLSGGSSSTEISIKQPGMLASLNSLHTSRNGS
YTHSYNGGGYMNGYSQTNGYPRKPSSTSGLLENGKKANKGFGSSQHLGAS
MASSKSLPPSKRNGRPVGYREVHMGPLYTFLHSLGMDEFRDVFLREKIDL
SACLLCDENDLREIGLPLGDRKKLMDAINKRNQIMKEASETKKELFDSAV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039341XLOC_039341Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062791TCONS_00062791Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR001660SAM
IPR020683Ankyrin_rpt-contain_dom
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 424..444
NoneNo IPR availableGENE3D1.10.150.50coord: 377..439
e-value: 3.7E-13
score: 48.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..278
NoneNo IPR availableCDDcd00204ANKcoord: 1..122
e-value: 6.41552E-26
score: 100.536
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 69..98
e-value: 0.015
score: 24.5
coord: 102..132
e-value: 230.0
score: 9.7
coord: 36..65
e-value: 2.4E-4
score: 30.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 69..101
score: 10.659
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 36..68
score: 11.968
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 369..434
e-value: 3.3E-10
score: 49.9
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 378..429
e-value: 1.8E-9
score: 37.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 9..155
e-value: 7.7E-29
score: 99.8
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 48..122
e-value: 9.0E-10
score: 38.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 29..122
score: 28.088
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 13..124
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 371..436

Blast
[Close]
BLAST of TCONS_00062791-protein vs. Swiss-Prot (Human)
Match: ANS4B (Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens GN=ANKS4B PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.430e-29
Identity = 60/149 (40.27%), Postives = 93/149 (62.42%), Query Frame = 0 
Query:   10 YSAAARESDLVTLKQCSKKEANRRDEDGMTPVHWASLYGNFEALKILINVGGSPDKQNNEGASSLHLAAGNGHLPCLVYLTNFGGNVHALNDNGGSPMHEAAMKGQLECVRHLEAIVTHQVSQDRSKVEKMQTKAKKDLEKRNKGREKL 158
            Y  AA +S L  LK+ +K++ N  DEDGMTP   A+ +GN EAL+I+ + GG PD+ +  G + LH AA NGH  C+ +L NFG N+ AL+++  +P+  AA + Q ECV  L+   T Q   +  KV +++ +A+K+  ++ K  E+L
Sbjct:    5 YHQAASDSYLELLKEATKRDLNLSDEDGMTPTLLAAYHGNLEALEIICSRGGDPDRCDIWGNTPLHFAASNGHAHCVSFLVNFGANIFALDNDLQTPLDAAASREQNECVALLDKAATAQNIMNPKKVTRLKEQAQKNARRQIKECERL 153
The following BLAST results are available for this feature:
BLAST of TCONS_00062791-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANS4B8.430e-2940.27Ankyrin repeat and SAM domain-containing protein 4... [more]
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