TCONS_00063069-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063069-protein
Unique NameTCONS_00063069-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length310

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063069-protein ID=TCONS_00063069-protein|Name=TCONS_00063069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MRLSSFLRRLSHNVLVIVVLANLILYHVNGSENLQYDSHEDLIKKVKESG
TLPPYKNGDKTTPDIKSPEQAGTVDYGFIHAFVASISVIIVSELGDKTFF
IAAIMAMRHSRLTVFAGAIAALGLMTVLSVFLGYATTVIPRKYTFYISTA
LFAIFGLKMLKEGYDMDPDEGAEELEEVQAELKKKEAELEGETTTDVETG
IIRSTIRRNRCMRAIMRCCSPILLQSFTMTFLAEWGDRSQLTTIILGSRE
NPIGVTIGGTIGHALCTGLAVMGGRMIAQKISVRTVTLIGGALFLSFAFS
ALFINERGEW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039500XLOC_039500Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063069TCONS_00063069Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 172..195
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..310
e-value: 3.7E-8
score: 32.3
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 224..298
e-value: 2.6E-23
score: 82.0
coord: 84..156
e-value: 3.1E-22
score: 78.6
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 93..102

Blast
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BLAST of TCONS_00063069-protein vs. Swiss-Prot (Human)
Match: TM165 (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.437e-110
Identity = 164/241 (68.05%), Postives = 194/241 (80.50%), Query Frame = 0 
Query:   69 EQAGTVDYGFIHAFVASISVIIVSELGDKTFFIAAIMAMRHSRLTVFAGAIAALGLMTVLSVFLGYATTVIPRKYTFYISTALFAIFGLKMLKEGYDMDPDEGAEELEEVQAELKKKEAELEG----ETTTDVETGIIRSTIRRNRCMRAIMRCCSPILLQSFTMTFLAEWGDRSQLTTIILGSRENPIGVTIGGTIGHALCTGLAVMGGRMIAQKISVRTVTLIGGALFLSFAFSALFIN 305
            + A   + GFIHAFVA+ISVIIVSELGDKTFFIAAIMAMR++RLTV AGA+ ALGLMT LSV  GYATTVIPR YT+Y+ST LFAIFG++ML+EG  M PDEG EELEEVQAELKKK+ E +         DVETG    T+ + + +  I    SPI +Q+ T+TFLAEWGDRSQLTTI+L +RE+P GV +GGT+GH LCTGLAV+GGRMIAQKISVRTVT+IGG +FL+FAFSALFI+
Sbjct:   84 DPATQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGYATTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLLNGPGDVETG-TSITVPQKKWLHFI----SPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFIS 319
The following BLAST results are available for this feature:
BLAST of TCONS_00063069-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1652.437e-11068.05Transmembrane protein 165 OS=Homo sapiens GN=TMEM1... [more]
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