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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00065040-protein ID=TCONS_00065040-protein|Name=TCONS_00065040-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1925bp
MRASSVVMTRTLLIFYLTIAIGNHVSGQSTTTNLVTSSTSTTELSTGIAE
VSTSIAEVSTSIIEASTSIVEPSTSIAGASTSIVEPSTSITEPSTSIVDP
STSIVEPSTSITEPSTSIVEPSTNIVEPSTSIVEPSTSIVEPSTSIVEPL
TSITEASTSIVEPSTSIVEPSTSIVEPSTSIVEPSTSIVEPLTSITEAST
NIVEPSTSIVEPSTSIVEPSTSIVEPSTSIVEPLTSITEASTSIVEPSTS
IVEPSTSITEASTSIVEPSTSIVEPLTSIVEPSTSIVEPSTSIVEPSTSI
VEPSTSIVEPSTSIVEPSTSIVEPSTSITEASTSIVEPSTSIVEPLTSIV
EPLTSLVEPSTSIVEPSTSIVEPSTSIVEPSTNTVEPSTSIVEPSTSITE
PSTSIVEPSTSIVEPSTSITEASTSITEPSTSIVEPSTSIVEPSTSIVEP
LTSIVEPSTSIVESSTSIVEPSTSIVEPSTSIVEPSTSITEASTSITEAS
TSIVEPSTSIGEPLTSIVEPSTSITEASTSIVEPLTSIVEPSTSIVEPST
SIVEPSTSIVEPSTNTVEPSTSIVDPSTSITEASTSIVEPSTSIVEPPTS
IVEPSTSIVEPSTSIVEPSTNTVEPSTSITEASTSITEASTSIVEPSTSI
VDPSTSVTEASTSITEASTSIVEPSTSIVEPSTNIVEPSTSIVEPSTNIV
EPSTSIVEPSTNIVEPSTSIVEPSTNIVEPSTSIVEPSTNTVEPSTSITE
ASTSITEASTSIVEPSTSIVDPSTSVTEASTSITEASTSIVEPSMSIVEP
STNIVEPSTSIVEPSTSIVEPSTSIVEPSTSIIEPSTSIVEPSTSIVEPS
TSIIEPSTSIIEPSTSIVEPSTNIVGPSTSITESSTSIVEPSKSIVEPST
SIVEPLTSIVEPSTNIEEPSTSIVEPSTSIVEPSTSIVGPSTSIVEPSTS
FTESSTSITESSTSITQPSQSLAPSSTFCLKKTVTETINNTVTQTKFQCS
ATPSVPVLMTTAVQSSAETSSSVMSSSPSMPMQSSMLSTISSISPIMTSS
DIIDQSASQMSSFPVSQLPSSNMMTSSIDSMTSLMMSSMCPTVTVTVTEY
QCPSSEVTTNVWLPTTIVSSSVSSNVQSQSSSMSTASQQISPQPSSLMMS
QSTSIPASQSSSVQSTLVPSSSVCYDGTITETVTSSYTTTTYQPCPSSSQ
VSSSMMMSSPISSSMDVSSAISSSMDMSSMISSSMDMFSMISSSMDMSSP
ISSSMDMSSMISSSMDMSSPISSSMDMSSAISSSIDMSSAISSSMDMSSA
ISSSMDMSSMISSSMDMSSPISSSMDMSSAISSSIDMSSAISSSMDMSSA
ISSSIDMSSAISSSMDMSSMISSSMDMSSPISSSMDISTSIIPSSSEIQS
SSSMVQTTTLPPTTSTAVETSSSTPVVVVETSTITPTSSTTSLVVPSSSV
TTTPPVYPWNVWCLHAINARRKCHHDTDQLVWDDALADNAQSWADELLEK
EKLAFDPENTFLGYGESHGFIRINFNNLRFVCERIVKVWYRQKKYWDCEA
ARPFGPIGSRYQDFTQLVWKDTSKVGVGVAMDDDESFAYVVAKYQPVGNI
NGQYPANVACKKPPIIIPRPPRPIYWLVTTYTFFIAFPPSLIFPGFGVVF
IYCEVWMIRVRRGRRRGPRNPWDYSVEDYRNRRYGLILVRRFYDMRILRL
PFECGRRPRLGRRKRRNTEDEVDEDDYLLSPGDEVVTFVRAAESADSYQT
TDYYDPVRMQPATGGPYCQVQKSCVCDTIPEVNTTVLMTKPYYGANNSVV
NESLAILGQWDRNTVIQLCKGANCNENTLSNSVSQIEISINDTQSDINII
KTAKVNLRKAIDCHVNNDVKSQLFDQYEALCKRLVIVKNVYEDLLRKKEV
FEQELQRCGKRSWLRSVLENMWYHG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1891..1911 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 807..829 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 472..508 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1129..1161 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 85..116 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 869..891 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 378..432 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 913..972 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1396..1422 |
| None | No IPR available | SUPERFAMILY | 141571 | Pentapeptide repeat-like | coord: 1216..1377 |
| IPR001283 | Cysteine-rich secretory protein, allergen V5/Tpx-1-related | PRINTS | PR00837 | V5TPXLIKE | coord: 1589..1602
score: 40.9
coord: 1480..1498
score: 37.62
coord: 1561..1577
score: 35.48 |
| IPR014044 | CAP domain | SMART | SM00198 | SCP_3 | coord: 1463..1602
e-value: 1.3E-8
score: 32.3 |
| IPR014044 | CAP domain | GENE3D | 3.40.33.10 | | coord: 1459..1615
e-value: 3.6E-24
score: 85.2 |
| IPR014044 | CAP domain | PFAM | PF00188 | CAP | coord: 1465..1594
e-value: 5.0E-11
score: 43.4 |
| IPR014044 | CAP domain | SUPERFAMILY | 55797 | PR-1-like | coord: 1462..1608 |
Blast
The following BLAST results are available for this feature:
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