TCONS_00063676-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063676-protein
Unique NameTCONS_00063676-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063676-protein ID=TCONS_00063676-protein|Name=TCONS_00063676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
KDARNSCKNYNDLMKWRERKRKSIDMYKMDGIISEFSKMDDTNRCKMWKR
FKEDEISSILIPNDMKETFMPIYCLGDGNCLYNSVSMLLVGDYQLKFELR
TKVLVELISNRDLYDDANMLNYGSFENFCFEDEVMGTMHNGAYSLIVHLI
ALTNILNLKINSIYPLIKHCGLNRDFFNRMVIPQTEDYYELTLDIMWTHT
RNVDVKNWTPNHFVPCITKNMFEKISSIEKNSSNKRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039918XLOC_039918Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063676TCONS_00063676Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003323OTU domainPFAMPF02338OTUcoord: 76..161
e-value: 7.0E-6
score: 26.5

Blast
[Close]
BLAST of TCONS_00063676-protein vs. Swiss-Prot (Human)
Match: VRTN (Vertnin OS=Homo sapiens GN=VRTN PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.463e-17
Identity = 52/170 (30.59%), Postives = 82/170 (48.24%), Query Frame = 0 
Query:   54 DEISSILIPNDMKETFMPIYCLGDGNCLYNSVSMLLVGDYQLKFELRTKVLVELISNRDLY-----DDANMLNYGSFENFC------------------FEDEVMGTMHNGAYSLIVHLIALTNILNLKINSIYPL--IKHCGLNRDFFNRMVIPQTEDYYELTLDIMWT 198
            D ++  L P D     +P+ C G+G+ L+ + SMLL GD  L  ELR + +VE++ +R  Y     D   ML    + + C                  F+ +V  +    ++S + HL AL ++L   I SIYP+  +K     R +FNR++ P+  D+   TL IMW 
Sbjct:   59 DSVALSLYPEDAPRNMLPLVCKGEGSLLFEAASMLLWGDAGLSLELRARTVVEMLLHRHYYLQGMIDSKVMLQAVRY-SLCSEESPEMTSLPPATLEAIFDADVKASCFPSSFSNVWHLYALASVLQRNIYSIYPMRNLK----IRPYFNRVIRPRRCDHVPSTLHIMWA 223
The following BLAST results are available for this feature:
BLAST of TCONS_00063676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VRTN3.463e-1730.59Vertnin OS=Homo sapiens GN=VRTN PE=1 SV=1[more]
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