TCONS_00063711-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063711-protein
Unique NameTCONS_00063711-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063711-protein ID=TCONS_00063711-protein|Name=TCONS_00063711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MLATLGVVDTLQVLPQENQMSFKVQKNQRCKQKHTIMKVTGFSTQPYRNQ
NAGSKENNLSLQNVSSDEEEVCFCFHEDDVLDESFFSDLMYKSKKKQLRS
SRPKRKVRSTVKQTFRNKQDFSKGNVNNNKGVDDEVELTQVLRKLPPKIN
LNLNQIKKEISKSQTMEDNHLLHKRNIDKKLKKNNILRCSQLPKSYSLPN
QSRISQQKLEYKSVEEKMLELQYRDISYSDYELLLTLDDTVKPPTANKST
FNKLSQEMKRNNDIELCVICMGDILFQEIVITLPECGHRFHKACIENWLL
NCSKQCPVDMTYIC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039936XLOC_039936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063711TCONS_00063711Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 255..312
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 267..309
e-value: 3.6E-6
score: 36.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 267..308
e-value: 2.1E-9
score: 37.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 267..309
score: 11.235
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 267..308
e-value: 2.98763E-10
score: 53.9888
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 236..313
e-value: 3.1E-12
score: 45.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063711-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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