TCONS_00063914-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063914-protein
Unique NameTCONS_00063914-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length590

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063914-protein ID=TCONS_00063914-protein|Name=TCONS_00063914-protein|organism=Clytia hemisphaerica|type=polypeptide|length=590bp
MIFVKKVMIYNFNIATKRLFSSSCLALQQGFCHYDILGVDRNASKKDIRV
AYLQKTKQYHPDSNPDDESLHEKFVKVTNAYQVLNDDHSRTLYNNSTSHS
NAVTQTHASRRARRAHSTSAANPFGSYVDEEDPYWGWSEEMKRKMYEDFY
ENQYPEYLKQQQEEWDARRRRSGLILLSITGAVIVFGIFNFTRILNYNEG
YRRRTDRITAENAAYLADRLKMWQEARKQEKKLRGIMIDFKKRAERRQAY
YAKMKTDPHQLMRFYGQKCKMHILTDSAKVTDTDGQLVPWQGDPEVMIDR
FDVRAHLDFIPEKVNKPEEKSEEDEKLARKCNYESYRTLVQIDATGASEE
QYLTQLTLEENYGKKIAQINEEKAKSKAKAKIHYQYKDSTGGKDEDSLDD
DSDNDEESDGELSDIDINVNVMELSEDQKNHLDALSMQYGIGYGQYCRQL
LLEKKEFEYVKRLEEEEEERSKMPGRKGKAARRDLRLKQKTLRGSPLSFA
MDTSKGDGSNDDDSDSSSSDGRSPRRQPHEDKIEFITEFGGGGGGDINQP
QTSSEPPIIDDDPRKREKQQQSSFFKTQIILVPSSSESVT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040061XLOC_040061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063914TCONS_00063914Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR019147SWAP_N_domain
IPR018253DnaJ_domain_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 52..67
score: 42.54
coord: 69..89
score: 34.33
coord: 34..52
score: 48.5
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 31..89
e-value: 2.0E-20
score: 83.9
IPR001623DnaJ domainGENE3D1.10.287.110coord: 29..134
e-value: 1.3E-21
score: 76.7
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 33..94
e-value: 4.0E-20
score: 71.6
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 32..97
score: 17.269
IPR001623DnaJ domainCDDcd06257DnaJcoord: 32..86
e-value: 4.87797E-17
score: 74.8893
IPR001623DnaJ domainSUPERFAMILY46565Chaperone J-domaincoord: 31..100
IPR019147Suppressor of white apricot N-terminal domainSMARTSM01141DRY_EERY_2coord: 260..390
e-value: 5.3E-46
score: 168.8
IPR019147Suppressor of white apricot N-terminal domainPFAMPF09750DRY_EERYcoord: 262..388
e-value: 4.7E-33
score: 114.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..590
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..415
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 74..93

Blast
[Close]
BLAST of TCONS_00063914-protein vs. Swiss-Prot (Human)
Match: CLASR (CLK4-associating serine/arginine rich protein OS=Homo sapiens GN=CLASRP PE=1 SV=4)

HSP 1 Score: 188.734 bits (478), Expect = 6.932e-52
Identity = 137/345 (39.71%), Postives = 198/345 (57.39%), Query Frame = 0 
Query:  222 MWQEARKQEKKLRGIMIDFKKRAERRQAYYAKMKTDPHQLMRFYGQKCKMHILTDSAKVTDTDGQLVPWQGDPEVMIDRFDVRAHLDFIPE------KVNKPEEKSEEDEKLARKCNYESYRTLVQIDATGASEEQYLTQLTLEENYGKKIAQINEEKAKSKAKAK--IHYQYKDSTGGK--------DEDSLDDDSDNDEESDGELSDIDINVNVMELSEDQKNHLDALSMQYGIGYGQYCRQLLLEKKEFEYVKRLEEEEEERSKMPGRKGKAARRDLRLKQKTLRG---SPLSFA------MDTSKGDGSNDDDSDSSSSDGRSPRRQPHEDKIEFITEFGG 541
            MW EARK E+KLRG+M+D+KKRAERR+ YY K+K DP Q ++ +G+ CK+H+ +  A   ++   ++PWQGD   MIDRFDVRAHLD IP+          PE++S+E     RKCNYE YR LVQ D  G SEEQ L Q+ ++E YG  + + +E++ K  A+ K  I Y Y+DST  K        +E+    + +++ + D  + DID+ V+V EL+++Q   L+  +  YG+  G + R L  +K+E E +K  +  EEE++   GR+ +        ++K LRG   SP S+A       D  K   S       S S   +P R   E+KI FIT FGG
Sbjct:    1 MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAAESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTTISPEQESDE-----RKCNYERYRGLVQNDFAGISEEQCLYQIYIDELYG-GLQRPSEDEKKKLAEKKASIGYTYEDSTVAKVEKAAEKPEEEESAAEEESNSDEDEVIPDIDVEVDVDELNQEQVADLNKQATTYGMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQ--RREFREKRLRGRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGR---EEKITFITSFGG 334
The following BLAST results are available for this feature:
BLAST of TCONS_00063914-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLASR6.932e-5239.71CLK4-associating serine/arginine rich protein OS=H... [more]
back to top