TCONS_00063922-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063922-protein
Unique NameTCONS_00063922-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length116

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063922-protein ID=TCONS_00063922-protein|Name=TCONS_00063922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp
MGKGKKDSGPIPGDATKGAKVFKQRCSQCHTVENGGKHKTGPNLYGLIGR
KTGQAANFSYTDANKKKGITWSKDTLWVYLENPAKYIPGTKMVFAGIKKK
NERADLIAYLEETTTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040065XLOC_040065Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063922TCONS_00063922Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002327Cyt_c_1A/1B
IPR009056Cyt_c-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0020037heme binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002327Cytochrome c, class IA/ IBPRINTSPR00604CYTCHRMECIABcoord: 54..64
score: 59.13
coord: 68..84
score: 53.27
coord: 38..53
score: 72.31
coord: 25..32
score: 72.66
coord: 104..112
score: 70.92
coord: 87..97
score: 81.31
IPR009056Cytochrome c-like domainPFAMPF00034Cytochrom_Ccoord: 15..112
e-value: 1.1E-12
score: 48.8
IPR009056Cytochrome c-like domainGENE3D1.10.760.10coord: 13..114
e-value: 6.8E-28
score: 97.4
IPR009056Cytochrome c-like domainPROSITEPS51007CYTCcoord: 13..114
score: 15.767
IPR009056Cytochrome c-like domainSUPERFAMILY46626Cytochrome ccoord: 12..112

Blast
[Close]
BLAST of TCONS_00063922-protein vs. Swiss-Prot (Human)
Match: CYC (Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 2.562e-52
Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:   13 GDATKGAKVFKQRCSQCHTVENGGKHKTGPNLYGLIGRKTGQAANFSYTDANKKKGITWSKDTLWVYLENPAKYIPGTKMVFAGIKKKNERADLIAYLEETTTK 116
            GD  KG K+F  +CSQCHTVE GGKHKTGPNL+GL GRKTGQA  +SYT ANK KGI W +DTL  YLENP KYIPGTKM+F GIKKK ERADLIAYL++ T +
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 105
The following BLAST results are available for this feature:
BLAST of TCONS_00063922-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CYC2.562e-5272.12Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2[more]
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