TCONS_00063933-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063933-protein
Unique NameTCONS_00063933-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1129

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063933-protein ID=TCONS_00063933-protein|Name=TCONS_00063933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1129bp
MDPLQVPETLVLSQSGGDASAMDDTHGALQGSLNSNDHNLADNNIMLHVP
PSSDLDHETLDLFDSHNEIHNEILLPNGPISATDDQNFDMINNANELTLE
EHETSQTTENSFHENNQFLFDGTPRNEDEIKKEPGGEITCEFCGALGHED
EFYQKSKKFCTLECSKRFAALHPQKKHPPKPVQLNSTNNRSNKRKIHRPG
VKLKKLKIDTNEATPSIESGLQQVSLDDINAENKYDEISLIDNHYNEDSY
TGSWSDKDFDWNNYLAQYQEKPASERLFKHTFKAPSLNEAHKGMKIEVNN
DRSDLNKETDVYYWLSTVIDVDNNMMLLRYSAFDDDSNDFWIDIRSKHIH
PVGWCYKNRKPLVPPTEIKSKDVKDWQQTIFTELSGSRTLSADFLDRVQK
GHYNKFECGSKVEVCDKRQNFSMCVATIVKIVGDRLCLRYDGLEQGVDVD
HWSHFLSSDIHPVGWSQLVGLALSPPFGWEKSETDWNEFIAENLHESNDA
PQECFVPESMGSAPSDAGTFEVGMKLEALNPLNPLSLTVASVVRTLEYNN
IVVNIDMTETFFICHASSGNIFPVGYAKQHKCFLTPPREQKQFDWNKYLT
QTESIAAPSSLFLHLKKRVTPFEVGTKVEAVDLREPSLICPATVVSIHGS
LLRIHFDGWDSTYDQFVSHDTLDIFPVHWCEKNSHPFQPPGSLNPDTVLD
TLRLKKLGYAIPRNRNTTTHGRPGRPPGSLNKTTPRPAAGRGSASGKGAK
GGKAGGKAGGKAGGKAGKLKKQQSSLISNVPFERQRFGNLREMRKGGEVQ
FSFNQKCACGPFLNPDDIRKFPNSISGYLNGPPHQNCIRKSLHEIVNAAN
DPNELLELFSREFYQSKKHKDLKLDNTICLEITGKNGKRFLRRVKGPSRS
GILSKYLSRICEMLQCCPQLIVDERNLSGHCGKSCHQQYADGDRVSSGPG
LSAATATTTMLDDDAMMNDDMLEDEEFLDDEMMEDKDDVIRDDGEDDEDH
NKTSNPTVSSSSTKQTVPLDSPCDPTSSSTDRGIDPLNLLDQEFLSSKDP
REWSVQEVMDFMTAIGCPAHAPSFQKQEIDGKALFLLSFDELESLTENKL
GPITKLKDALQSLKKMWQIPLTKSSTKAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040072XLOC_040072Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063933TCONS_00063933Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004092Mbt
IPR001660SAM
IPR021987SLED
IPR012313Znf_FCS
IPR013761SAM/pointed
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004092Mbt repeatSMARTSM00561l3mbt_4coord: 484..587
e-value: 2.8E-15
score: 66.8
coord: 593..690
e-value: 4.5E-37
score: 139.2
coord: 259..365
e-value: 4.0E-16
score: 69.6
coord: 374..476
e-value: 6.4E-25
score: 98.8
IPR004092Mbt repeatPFAMPF02820MBTcoord: 294..368
e-value: 3.5E-15
score: 56.0
coord: 524..589
e-value: 2.2E-14
score: 53.5
coord: 411..479
e-value: 8.2E-20
score: 70.8
coord: 627..691
e-value: 9.5E-22
score: 77.0
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 374..476
score: 27.8
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 484..587
score: 22.986
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 259..365
score: 28.134
IPR004092Mbt repeatPROSITEPS51079MBTcoord: 593..690
score: 32.898
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 1050..1116
e-value: 4.5E-10
score: 49.5
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 1052..1114
e-value: 2.2E-12
score: 47.1
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 1053..1116
score: 11.651
NoneNo IPR availableGENE3D2.30.30.140coord: 41..267
e-value: 0.031
score: 14.0
NoneNo IPR availableGENE3D2.30.30.140coord: 399..517
e-value: 5.6E-29
score: 100.2
NoneNo IPR availableGENE3D2.30.30.140coord: 268..398
e-value: 1.2E-34
score: 118.7
coord: 601..774
e-value: 7.3E-35
score: 119.5
NoneNo IPR availableGENE3D2.30.30.140coord: 518..600
e-value: 9.8E-21
score: 73.4
NoneNo IPR availableGENE3D1.10.150.50coord: 1045..1119
e-value: 2.5E-16
score: 59.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 710..776
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 990..1037
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 517..614
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 259..371
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 398..505
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 592..692
IPR021987SLED domainPFAMPF12140SLEDcoord: 802..922
e-value: 1.4E-14
score: 54.4
IPR012313Zinc finger, FCS-typePROSITEPS51024ZF_FCScoord: 131..166
score: 10.977
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 1046..1118

Blast
[Close]
BLAST of TCONS_00063933-protein vs. Swiss-Prot (Human)
Match: LMBL2 (Lethal(3)malignant brain tumor-like protein 2 OS=Homo sapiens GN=L3MBTL2 PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 5.652e-87
Identity = 201/612 (32.84%), Postives = 299/612 (48.86%), Query Frame = 0 
Query:  100 EEHETSQTTENSFHENNQFLFDGTPRNEDEIKKEPGGEITCEFCGALGHEDEFYQKSKKFCTLECSKRFAALHPQKKHPPKPVQLNSTNNRSNKRKIHRPGVKLKKLKIDTNEATPSIESGLQQVSLDDINAENKYDEISLIDNHYNEDSYTGSWSDKDFDWNNYLAQYQEKPASERLFKHTFKAPSLNEAHKGMKIEVNNDRSDLNKETDVYYWLSTVIDVDNNMMLLRYSAFDDD-SNDFWIDIRSKHIHPVGWCYKNRKPLVPPTEIKSKDVKDWQQTIFTELSGSRTLSADFLDRVQKGHYNKFECGSKVEVCDKRQNFSMCVATIVKIVGDRLCLRYDGLEQGVDVDHWSHFLSSDIHPVGWSQLVGLALSPPFGWEKSETDWNEFIAENLHESNDAPQEC----FVPESMGSAPSDAGTFEVGMKLEALNPLNPLSLTVASVVRTLEYNNIVVNIDMTET-----FFICHASSGNIFPVGYAKQHKCFLTPPR--EQKQFDWNKYLTQTESIAAPSSLFLHLKKRVTPFEVGTKVEAVDLREPSLICPATVVSIHGSLLRIHFDGWDSTYDQFVSHDTLDIFPVHWCEKNSHPFQPPGSLNPDTVL 699
            E+ E  +   +  H     L  GTPR+ D    EP     CE CG +G  + F+ K+K+FC++ CS+ +++     K      +L         + +H+     K      ++ T  +  G               D + L                  FDW  +L  +  K A    FKH        +  KGMK+EV N  + L       YW+++VI      +LLRY  F++D S+DFW ++ +  +HP+GWC  N K LVPP  I +K   DW+  +   L GSRTL  DF  ++ +     F  G ++EV DK Q     +A +  ++G RL L Y+  +   D D W H  S  IHPVGWS+ VG  +             +E  ++  H        C    ++ + + +  ++ G FE GMKLEA++PLN  ++ VA+V + L    +++ +D   +     +F  HASS  IFP  + +++   LTPP+  E + F+W  YL +T+S AAPS LF ++      F+VG K+EAVDL EP LIC ATV  +   LL IHFDGWDS YDQ+V  ++ DI+PV WCE   +  QPP +  P T L
Sbjct:   57 EDREAGELPTSPLH----LLSPGTPRSLDGSGSEPA---VCEMCGIVGTREAFFSKTKRFCSVSCSRSYSS---NSKKASILARLQGKPPTKKAKVLHKAAWSAKIGAFLHSQGTGQLADG----------TPTGQDALVL-----------------GFDWGKFLKDHSYKAAPVSCFKHVPLYDQWEDVMKGMKVEVLNSDAVLPSRV---YWIASVIQTAGYRVLLRYEGFENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIHAK-FTDWKGYLMKRLVGSRTLPVDFHIKMVESMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYE--DGDSDDDFWCHMWSPLIHPVGWSRRVGHGIK-----------MSERRSDMAHHPTFRKIYCDAVPYLFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYEAQTFNWENYLEKTKSKAAPSRLF-NMDCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDCESPDIYPVGWCELTGYQLQPPVAAEPATPL 613
The following BLAST results are available for this feature:
BLAST of TCONS_00063933-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LMBL25.652e-8732.84Lethal(3)malignant brain tumor-like protein 2 OS=H... [more]
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