TCONS_00063934-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00063934-protein
Unique Name	TCONS_00063934-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	465

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00063934-protein ID=TCONS_00063934-protein|Name=TCONS_00063934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MGIRTTMSCGTTPEIFATIDFGTEITPEEAFAQQRKYQTKGPLVNSEYYT
GWLDYWGSPHQRRGADVIAKHLKDILTTNASLNLYMLHGGTNFGFMNGVD
IGSKGSRLISPTSYDYDAPLSEAGDTTWKYFKMREVLKQFNANPLPAVPA
NTSKLVQGALRVPPLKTFVDFKGYLVYWGLNVIESDSPKPMSELGLGYGF
VCYTPQIPPKYQNKTVTLVFKEMSDEAIFVVDNVYKFSIGEAVKNYELKI
ELGVELDILVVNQGRAAYAPKGYHYLQECKGICGDVRFKDSNETLKGWKQ
YNINDTTIWEENHPNFPAENHIGKTTKGSDLMDRFFEDSENRKEDQFKIQ
PILPIENNLDRYPSQIKSTQKEYQFVWESFFALQNTTDTYLRMKGFNKGQ
VYLNMYNLGRFWQEKGPQKTLFVPKNYLQAGLNVLLVIALDDYPTLQLNP
PQYPEFEFVVQPDLG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040073	XLOC_040073	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00063934	TCONS_00063934	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001944	Glycoside_Hdrlase_35
IPR031330	Gly_Hdrlase_35_cat
IPR008979	Galactose-bd-like
IPR017853	Glycoside_hydrolase_SF

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001944	Glycoside hydrolase, family 35	PRINTS	PR00742	GLHYDRLASE35	coord: 80..95 score: 62.87 coord: 44..59 score: 43.75 coord: 398..414 score: 44.29
IPR031330	Glycoside hydrolase 35, catalytic domain	PFAM	PF01301	Glyco_hydro_35	coord: 5..139 e-value: 9.8E-36 score: 123.9
IPR008979	Galactose-binding domain-like	GENE3D	2.60.120.260		coord: 296..465 e-value: 1.5E-10 score: 40.7
IPR008979	Galactose-binding domain-like	GENE3D	2.60.120.260		coord: 166..295 e-value: 5.5E-17 score: 61.2
IPR008979	Galactose-binding domain-like	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 369..449
None	No IPR available	GENE3D	3.20.20.80		coord: 7..145 e-value: 1.3E-24 score: 86.6
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 27..140

Blast

[Close]

BLAST of TCONS_00063934-protein vs. Swiss-Prot (Human)
Match: BGAL (Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.473e-61
Identity = 149/465 (32.04%), Postives = 218/465 (46.88%), Query Frame = 0

Query:    4 RTTMSCGTTPEIFATIDFGTEITPEEAFAQQRKYQTKGPLVNSEYYTGWLDYWGSPHQRRGADVIAKHLKDILTTNASLNLYMLHGGTNFGFMNGVDIGSKGSRLISPTSYDYDAPLSEAGDTTWKYFKMREVLKQFNANPLPAVPANTSKLVQGALRVPPLKTFVDFKGYLVYWGLNVIESDSPKPMSELGLGYGFVCYTPQIPPKYQNKT-VTLVFKEMSDEAIFVVDNVYKFSIGE-AVKNYELKIELGVELDILVVNQGRAAYAPKGYHYLQECKGICGDVRFKDSNETLKGWKQYNINDTTIWEENHPNFPAENHIGKTTKGSDLMDRFFEDSENRKEDQFKIQPILPIENNLDRYPSQIKSTQKEYQFVWESFFALQNTTDTYLRMKGFNKGQVYLNMYNLGRFWQEKGPQKTLFVPKNYLQ-AGLNVLLVIALDDYPTLQLNPPQYPEFEFVVQPDLG 465
            +T + CG    ++ T+DFGT     +AF  QRK + KGPL+NSE+YTGWLD+WG PH     + +A  L DIL   AS+NLYM  GGTNF + NG +          PTSYDYDAPLSEAGD T KYF +R ++++F   P   +P +T K   G + +  LKT       L   G   I+S  P    ++   YGFV Y   +P    N   ++     + D A   VD + +  +    V    +  + G  LD+LV N GR  Y      Y+ + KG+  ++    S+  L  W  + ++              E+ +     G    D    D            P   + N     PS I    +                DT+++  G+ KGQV++N +NLGR+W  +GPQ TLFVP++ L  +  N + V+ L+  P    + P+     FV +P +G
Sbjct:  225 KTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN----SPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSG--PIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGA----YINDFKGLVSNLTL--SSNILTDWTIFPLD-------------TEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNF--SIPSGIPDLPQ----------------DTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPC-SSDDPELCAVTFVDRPVIG 645

The following BLAST results are available for this feature:

BLAST of TCONS_00063934-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00063934-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BGAL	1.473e-61	32.04	Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV...	[more]

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TCONS_00063934-protein (polypeptide) - C. hemisphaerica