TCONS_00064062-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064062-protein
Unique NameTCONS_00064062-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064062-protein ID=TCONS_00064062-protein|Name=TCONS_00064062-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
NDHEIFFKHNDMMSEQDKKRKEDFKKHEMDKEHERREKQKNMSEEERKKD
DEEYKQHHEQKHESMHEPGHKKQLEEVWEKEDGLDPDSFDPRTFFNLHDK
NGDGYLDTYELETFFLSDLDKVYNESDPNTDKQEREEEMERMREHVLKNM
DTDKDGLVSYDEFIAETKDTDFDKDEEWKPLTEEEQFSDEEYKEYERLLS
EQEGHHEDENHVEGGAQAEVHH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040166XLOC_040166Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064062TCONS_00064062Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..55
NoneNo IPR availableGENE3D1.10.238.10coord: 8..104
e-value: 4.8E-4
score: 19.1
NoneNo IPR availableGENE3D1.10.238.10coord: 105..155
e-value: 9.4E-13
score: 47.7
NoneNo IPR availableGENE3D1.10.238.10coord: 156..213
e-value: 0.0045
score: 16.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 93..165
e-value: 3.1E-11
score: 43.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 9.743
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 86..121
score: 10.301
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 99..111
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 151..163
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 74..165

Blast
[Close]
BLAST of TCONS_00064062-protein vs. Swiss-Prot (Human)
Match: NUCB2 (Nucleobindin-2 OS=Homo sapiens GN=NUCB2 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 5.236e-43
Identity = 90/190 (47.37%), Postives = 134/190 (70.53%), Query Frame = 0 
Query:   17 DKKRKEDFKKHEMDKEHERREKQKNMSEEERKKDDEEYKQHHE--QKHESMHEPGHKKQLEEVWEKEDGLDPDSFDPRTFFNLHDKNGDGYLDTYELETFFLSDLDKVYNESDPNTDKQEREEEMERMREHVLKNMDTDKDGLVSYDEFIAETKDTDFDKDEEWKPLTEEEQFSDEEYKEYERLLSEQEG 204
            DK R E+FKK+EM KEHERRE  K ++EE+RK+++ ++++  +  + H  ++ PG K QL+EVWE+ DGLDP+ FDP+TFF LHD N DG+LD  ELE  F  +L+KVY+  +   D  E EEE  RMREHV+  +DT+KD LV+ +EF+  T+  +F + + W+ L +++ F++EE KEYE +++ QE 
Sbjct:  170 DKTRHEEFKKYEMMKEHERREYLKTLNEEKRKEEESKFEEMKKKHENHPKVNHPGSKDQLKEVWEETDGLDPNDFDPKTFFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLRMREHVMSEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETLDQQQFFTEEELKEYENIIALQEN 359
The following BLAST results are available for this feature:
BLAST of TCONS_00064062-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUCB25.236e-4347.37Nucleobindin-2 OS=Homo sapiens GN=NUCB2 PE=1 SV=2[more]
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