TCONS_00064157-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064157-protein
Unique Name	TCONS_00064157-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	645

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064157-protein ID=TCONS_00064157-protein|Name=TCONS_00064157-protein|organism=Clytia hemisphaerica|type=polypeptide|length=645bp
MDKSIIQKTHDTLGKAIKKPPLTEKLLNKPPFRFIHDIATEVIRTGVFKG
LYTEHELNSSNVSERDAKVAFLQKLVDCVGHVRGEPMSVRPSKCVAGHEP
EKTNELLQFIGKLCLDKADTTDAVQKTLSGEKPGGKKKSSSKKKEDTKEK
DGSAKDRKKEDKKDGEKEKDRDKRKDKEKEKSKDRSSDRKSRESSGKNKE
EKPLKEDKGRKDRDGSSKDKDKDKKRETSSSKDREGSSKHRDGSSKDRKG
SSKDRESSSKDREGSSKDRKKDRDREKDKERRSKSKEERDIESAKKDRSE
KEKEKEKSRDKERTSKEKDPSSSSRSKEKEKVEKIVDQNNNEETDGNDSN
RSIQRPTSAKGQRRRHEGEDEDKQDKENEVPKPTLQQPPQQEEPIETRKQ
SAGVRKAPARPSSARPAPPRKKKQEPAEDTKRIDSGRGGQPVAPVIIEGK
KGSSSKQDDDDDDDTFIVEEDPALQNILEMKSSESNTDLINTEEHGCLVN
KMLESKKEAETRQKQPTKTEDKPVLFDAARRKEKEMAEKEINKLRDSIQT
LVRSAHPLGKIMDYVQEDIDSMQKELQMWKDENDQHVKALKAEQSITETE
VEPLHAQLAELESEIAEMMDNISTVKSNILRNEEKIEELIVGITT

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040228	XLOC_040228	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064157	TCONS_00064157	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 277..311
None	No IPR available	COILS	Coil	Coil	coord: 601..628
None	No IPR available	COILS	Coil	Coil	coord: 562..589
None	No IPR available	COILS	Coil	Coil	coord: 534..554
None	No IPR available	PFAM	PF10243	MIP-T3	coord: 48..261 e-value: 3.4E-42 score: 144.8 coord: 194..640 e-value: 7.1E-79 score: 265.9
None	No IPR available	GENE3D	1.20.5.170		coord: 597..645 e-value: 7.9E-4 score: 19.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..467

Blast

[Close]

BLAST of TCONS_00064157-protein vs. Swiss-Prot (Human)
Match: MIPT3 (TRAF3-interacting protein 1 OS=Homo sapiens GN=TRAF3IP1 PE=1 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.931e-122
Identity = 269/701 (38.37%), Postives = 395/701 (56.35%), Query Frame = 0

Query:    1 MDKSIIQKTHDTLGKAIKKPPLTEKLLNKPPFRFIHDIATEVIR-TGVFKGLYTEHELNSSNVSERDAKVAFLQKLVDCVGHVRGEPMSVRPSKCVAGHEPEKTNELLQFIGKLCLDKADTTDAVQKTLSGEKPGGKKKSSSKKKEDTKEKDGSAKDRKKEDKKDGEKEKDRDKRKDKEKEKSKDRSS------DRKSRES---------SGKNKEEKPLKE---------DKGRKDRDGSSKDKDKDKKRET---SSSKDREGSSKHRDGSSKDRKGSSKDRESSSKDREGSSKDRKKDRDREKDKERRSKSKE-ERDIESAKKDRSEKEKEKEKSRDKERTSKEKDPSSSSR----SKEKEKVEKIVDQNNNEETDGNDSNRSIQRPTSAKGQRRRHEGEDEDKQDK------ENEVPKPTLQQ-------------PPQQ------EEPIETRKQSAGVRKAPARPSSARPAPPRKKKQEPAEDTKRIDSGRGGQPVAPVIIEGKKGSSSKQDDDDDDDTFIVEEDPALQNILEMKSSESNTDLINTEEHGCLVNKMLESKKEAETRQKQPTKTEDKPVLFDAARRKEKEMAEKEINKLRDSIQTLVRSAHPLGKIMDYVQEDIDSMQKELQMWKDENDQHVKALKAEQSITETEVEPLHAQLAELESEIAEMMDNISTVKSNILRNEEKIEELIVGI 643
            M+ +++++T + LGK I++PPLTEKLL+KPPFR++HDI TEVIR TG  KGLYT+ E+ S NV ++DAK++FLQK +D V  V GEP+  +P++ VAGHEPE+TNELLQ IGK CL+K  + DAV++ L+GEK  G+ K  +     ++E D   K+ ++E+ +  +  +DR   + KE+  S+DR        DRK RE          +G N+  +  +E         ++ +KDR    +D+D ++K+ET   S     +   + RD      KG  +DR            DR+K+R+ +K +++ + S E  + +       S+ E E E S    R SK     +S R    S E  K + I  ++ +    G ++  + +  TS  G +  +        D       EN  P PT +Q             P  Q      E P    + S+ +R+ P RP SARPAPPR K+Q+  E  + +D    G+ V+ VI E      S   D+++DD F+VE  P L  + E++   +  +L   E+HG LV K+LE+KK+ E  Q+ P   E +  LF++A +KEK++  KEI KLR SIQTL +SA PLGKIMDY+QED+D+MQ ELQMW  EN QH +AL+ EQ IT+  VEPL A+LAELE  I +  D I  VK+NIL+NEEKI++++  I
Sbjct:    1 MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKSDNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLSSDDAVRRVLAGEK--GEVKGRASLTSRSQELDN--KNVREEESRVHKNTEDRGDAEIKERSTSRDRKQKEELKEDRKPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHDKPEKKSASSGEMSKKLSDGTFKDSKAETETEIS---TRASKSLTTKTSKRRSKNSVEGRKEDNISAKSLDSIVSGINNEPNQETTTSEIGTKEANINSTSISDDNSASLRCENIQPNPTEKQKGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIRRIP-RPGSARPAPPRVKRQDSMEALQ-MDRSGSGKTVSNVITE------SHNSDNEEDDQFVVEAAPQLSEMSEIEMVTA-VELEEEEKHGGLVKKILETKKDYEKLQQSPKPGEKERSLFESAWKKEKDIVSKEIEKLRTSIQTLCKSALPLGKIMDYIQEDVDAMQNELQMWHSENRQHAEALQQEQRITDCAVEPLKAELAELEQLIKDQQDKICAVKANILKNEEKIQKMVYSI 685

The following BLAST results are available for this feature:

BLAST of TCONS_00064157-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064157-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MIPT3	1.931e-122	38.37	TRAF3-interacting protein 1 OS=Homo sapiens GN=TRA...	[more]

You are here

TCONS_00064157-protein (polypeptide) - C. hemisphaerica