TCONS_00064172-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064172-protein
Unique NameTCONS_00064172-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064172-protein ID=TCONS_00064172-protein|Name=TCONS_00064172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=100bp
MSALRKFIPLFDRVLVQRFVPETSTKGGILLPETSVNKIPEGTVVAVGPG
VRNENGSVTPVAVQEGDKVALPEFGGTKIELNSQEYFIFREHEILGKLEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040238XLOC_040238Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064172TCONS_00064172Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR018369Chaprnonin_Cpn10_CS
IPR011032GroES-like
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 64..76
score: 37.74
coord: 7..22
score: 46.68
coord: 29..50
score: 46.88
coord: 85..98
score: 34.97
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 6..98
e-value: 1.6E-38
score: 143.9
IPR020818GroES chaperonin familyGENE3D2.30.33.40coord: 2..99
e-value: 4.1E-35
score: 119.3
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 6..97
e-value: 5.0E-30
score: 103.3
IPR020818GroES chaperonin familyHAMAPMF_00580CH10coord: 6..99
score: 18.999
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 6..98
e-value: 1.8478E-37
score: 122.231
IPR018369Chaperonin GroES, conserved sitePROSITEPS00681CHAPERONINS_CPN10coord: 7..31
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 5..99

Blast
[Close]
BLAST of TCONS_00064172-protein vs. Swiss-Prot (Human)
Match: CH10 (10 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 6.411e-33
Identity = 56/96 (58.33%), Postives = 74/96 (77.08%), Query Frame = 0 
Query:    2 SALRKFIPLFDRVLVQRFVPETSTKGGILLPETSVNKIPEGTVVAVGPGVRNENGSVTPVAVQEGDKVALPEFGGTKIELNSQEYFIFREHEILGK 97
             A RKF+PLFDRVLV+R   ET TKGGI+LPE S  K+ + TVVAVG G + + G + PV+V+ GDKV LPE+GGTK+ L+ ++YF+FR+ +ILGK
Sbjct:    4 QAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGK 99
The following BLAST results are available for this feature:
BLAST of TCONS_00064172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CH106.411e-3358.3310 kDa heat shock protein, mitochondrial OS=Homo s... [more]
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