TCONS_00064355-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064355-protein
Unique NameTCONS_00064355-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064355-protein ID=TCONS_00064355-protein|Name=TCONS_00064355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
LCKHQRSIHCQIKASVDESKPFVCRACGKRLKSADTLRRHIKWFHADKSP
LQNKYDDHGYGTRLITKKKLVGGNQRKFHSVQTANNAPAELELMTSTQNC
YVALQSGPARNGSESKPLTSYNCTYCEGPIVRFISSRDLLEHCLKVHNKT
L
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040354XLOC_040354Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064355TCONS_00064355Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 22..45
e-value: 0.019
score: 24.2
coord: 121..147
e-value: 4.8
score: 16.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 24..45
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 22..50
score: 12.196
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 15..52
NoneNo IPR availableGENE3D3.30.160.60coord: 1..32
e-value: 2.7E-5
score: 23.9
NoneNo IPR availableGENE3D3.30.160.60coord: 33..149
e-value: 4.0E-7
score: 29.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064355-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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