TCONS_00064828-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064828-protein
Unique NameTCONS_00064828-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length625

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064828-protein ID=TCONS_00064828-protein|Name=TCONS_00064828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=625bp
MNTRRGINTLAKFAQQVQKDASVITRTTPVLHNVQKRDSSSGSFAMGIFS
GHANVDQVFPYPNALNEEQMEYLESMIDPVEKFMKEKNDAAANDANETID
PETLEGYKEMGAFGLQVPEDMNGVGFNNTQYARVVEIVGKYDLGVGIALG
AHQSIGFKGILIAGNEQQKQKYLPTLATGERFAAFCLTEPTSGSDAASIR
TSATLSEDGKHWILNGGKLWISNGGIADVFTVFAQTPVKDEKTGEMKNKV
TAFIVERDFGGVTNGPPEKKMGIKCSNTAEVFFENVPIPVENVIGGVGEG
FKVAMNILNNGRFGMAAALSGTQKSLIAQATDFAANRTQFGKKIVEFGGI
QEKLANMALKHYVTESMAYVVCGMMDKGFKDFQLEAAISKIYASEAAWHV
ADETIQILGGMGYMKDTGTERVMRDLRIFRIFEGTNDILRLFIALTGLQN
AGKDLRDLQKKISNPFANMGTLVEQGILRSKRAAGLNTGPDFSSSVHADL
RSQSDSVSKCIAQFGETSEGLLIKYKKDIINQQMICSRFADAAIDIFGMV
AVLSRASNALTNGTASAEHEKQLAQIFVSEASLRTARNLKSCRDHDNITN
DKLKSKIANEIISEQGVVAQHPLGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040665XLOC_040665Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064828TCONS_00064828Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR009075AcylCo_DH/oxidase_C
IPR013786AcylCoA_DH/ox_N
IPR006089Acyl-CoA_DH_CS
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0003995acyl-CoA dehydrogenase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003995 acyl-CoA dehydrogenase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 184..286
e-value: 3.8E-25
score: 87.8
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 298..444
e-value: 4.2E-39
score: 134.0
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 297..444
NoneNo IPR availableGENE3D1.20.140.10coord: 492..616
e-value: 1.4E-8
score: 34.1
NoneNo IPR availableGENE3D2.40.110.10coord: 183..286
e-value: 1.2E-35
score: 121.4
NoneNo IPR availableGENE3D1.20.140.10coord: 287..461
e-value: 2.9E-58
score: 195.9
NoneNo IPR availableCDDcd01161VLCADcoord: 43..452
e-value: 0.0
score: 688.05
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalPFAMPF02771Acyl-CoA_dh_Ncoord: 76..180
e-value: 9.7E-22
score: 77.7
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3D1.10.540.10coord: 32..181
e-value: 6.3E-29
score: 100.2
IPR006089Acyl-CoA dehydrogenase, conserved sitePROSITEPS00073ACYL_COA_DH_2coord: 406..425
IPR006089Acyl-CoA dehydrogenase, conserved sitePROSITEPS00072ACYL_COA_DH_1coord: 186..198
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 58..311

Blast
[Close]
BLAST of TCONS_00064828-protein vs. Swiss-Prot (Human)
Match: ACADV (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1)

HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 346/604 (57.28%), Postives = 435/604 (72.02%), Query Frame = 0 
Query:   24 ITRTTPVLHNVQKRDSSSGSFAMGIFSGHANVDQVFPYPNALNEEQMEYLESMIDPVEKFMKEKNDAAANDANETIDPETLEGYKEMGAFGLQVPEDMNGVGFNNTQYARVVEIVGKYDLGVGIALGAHQSIGFKGILIAGNEQQKQKYLPTLATGERFAAFCLTEPTSGSDAASIRTSATLSEDGKHWILNGGKLWISNGGIADVFTVFAQTPVKDEKTGEMKNKVTAFIVERDFGGVTNGPPEKKMGIKCSNTAEVFFENVPIPVENVIGGVGEGFKVAMNILNNGRFGMAAALSGTQKSLIAQATDFAANRTQFGKKIVEFGGIQEKLANMALKHYVTESMAYVVCGMMDKGFKDFQLEAAISKIYASEAAWHVADETIQILGGMGYMKDTGTERVMRDLRIFRIFEGTNDILRLFIALTGLQNAGKDLRDLQKKISNPFANMGTLVEQGILRSKRAAGLNTGPDFSSSVHADLRSQSDSVSKCIAQFGETSEGLLIKYKKDIINQQMICSRFADAAIDIFGMVAVLSRASNALTNGTASAEHEKQLAQIFVSEASLRTARNLKSCRDHDNITNDKLKS--KIANEIISEQGVVAQHPLGF 625
            +TR  P         + S SFA+G+F G    DQVFPYP+ LNEEQ ++L+ +++PV +F +E ND A NDA E ++  T +G KE+GAFGLQVP ++ GVG  NTQYAR+VEIVG +DLGVGI LGAHQSIGFKGIL+ G + QK+KYLP LA+GE  AAFCLTEP+SGSDAASIRTSA  S  GK++ LNG KLWISNGG+AD+FTVFA+TPV D  TG +K K+TAF+VER FGG+T+GPPEKKMGIK SNTAEVFF+ V +P ENV+G VG GFKVAM+ILNNGRFGMAAAL+GT + +IA+A D A NRTQFG+KI  FG IQEKLA M +  YVTESMAY+V   MD+G  DFQ+EAAISKI+ SEAAW V DE IQI+GGMG+MK+ G ERV+RDLRIFRIFEGTNDILRLF+AL G  + GK+L  L   + NPF N G L+ +   + +R AGL +G   S  VH +L    +   + + QF    E  LIK+KK I+N+Q +  R AD AID++ MV VLSRAS +L+ G  +A+HEK L   +  EA+ R    + + +  D    +  ++   I+  ++   GVV  +PLGF
Sbjct:   60 LTRKKPA-------KAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQS-DPWQQELYRNFKSISKALVERGGVVTSNPLGF 655
The following BLAST results are available for this feature:
BLAST of TCONS_00064828-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACADV0.000e+057.28Very long-chain specific acyl-CoA dehydrogenase, m... [more]
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