TCONS_00064858-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064858-protein
Unique NameTCONS_00064858-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064858-protein ID=TCONS_00064858-protein|Name=TCONS_00064858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MGLMGVLSENVNVIMLSSKKSACEPKDALSWNGKTKDGTRNFSTDDGYVD
VDIPSDDEYESENELNFSLIDPNILRARIIRHLPSEVTTKYGSPIVLTCL
TTVLFPVDIEWTLNGTIIEPTIDGRIYFSDDRRQLFILYLTTDEQGTIEM
VARNRFGSEKSICQLKVQNRTRAVTEPLLSLPNTLELR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040680XLOC_040680Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064858TCONS_00064858Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR013098Ig_I-set
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 84..168
e-value: 0.0021
score: 27.3
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 81..167
e-value: 5.6E-8
score: 32.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 58..175
e-value: 9.0E-12
score: 44.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 72..175
score: 6.633
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 82..177

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064858-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top