TCONS_00065018-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065018-protein
Unique NameTCONS_00065018-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length788

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065018-protein ID=TCONS_00065018-protein|Name=TCONS_00065018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=788bp
MKMVMSYCKAVLLYIFCMSCHAVRDLYRDLDGGFGEELDFSQTSGRSNQR
IIQCDLGDDFKMFGTPSRTAFVHFSGVLTFDPSTAREISTLRCQQRPDST
LDFIAPYWRHYDHGKISIMEYNKNAVVEPPSSLLPSITTIPTVSSDILST
TVNILPITSTALLATPAMSNIASSEVISATSSVIAPSSSIKDLTSSVKST
PSTFSSIPTSIGSSISLQSESVSPSLSIAASSFMSTPIQPMPTESQAPIT
TESTQIDEQIDQPMTTAQSNDQSTNGIESINQSTESATTFEPVINIVVDE
DNHRSRRNTDTDKDTSNLLQFPVKFLPDIATDLKEAFETGKKLNRVTVKQ
RNNLTADRIERVIAFTWFDMYSDAETNSLGRRNRHSFQTLLIKVGEQWFA
QNYYAVLSSNGNFNVNKNEEGQTCGHASVGISRFLPDTPSDEVAFSRGVY
YLVNIPKIFEIFTNEYNWRDLGSWVYDLNPDVENQPTPITFNCVEDSQDD
AKCIILFASSEARSNKKRRRRETNFVEKLLVKFSETSHNGHHTTKNYREK
RVFTTFPPTVPITTSKYSHKTRQRSTTFTKAPMLQPRHTFSSISSIGTTT
ANPNKADELITISDGLFTIPTMPSSVEPNNKPLNISEAAQIIANKYCRYR
DPGLYKLPLICDVFISCSLGGKATPMVCPKGTGFNPRINVCDHASYYECN
TDNILVNALIPKSQAQLNHRNFCEYQGYGIYPDPSSCTNYYACTNARSIR
MSCPAGLQFQPDETKKNGRCEFAYKVNCKEGKRTDEIA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040763XLOC_040763Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065018TCONS_00065018Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 645..701
e-value: 1.0E-7
score: 41.7
coord: 721..780
e-value: 2.0E-10
score: 50.7
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 712..787
e-value: 3.2E-12
score: 45.6
coord: 637..707
e-value: 4.2E-11
score: 42.1
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 723..778
e-value: 3.7E-9
score: 36.5
coord: 647..699
e-value: 1.8E-8
score: 34.3
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 720..780
score: 13.266
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 644..701
score: 11.516
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 643..702
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 721..782

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065018-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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