TCONS_00065027-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065027-protein
Unique NameTCONS_00065027-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065027-protein ID=TCONS_00065027-protein|Name=TCONS_00065027-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
SLQKRLNHLQELSLQPRLTQDRCLYLIQKIPQILLIDTKSNLTEKIKNLQ
TLGFNDQQIFELVMKHPAILTYSVDNVKAKVTFISEKANGRLALLVKFPR
VFTSSLVRLEERYHYLLQEGFLTEKSRFTENKLRALVLTKDSDFVYRVTN
GRMKDYRQFQKDFQTDNKFDDFNEGEEEEINDQFDFDDKEDIEISR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040767XLOC_040767Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065027TCONS_00065027Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 24..55
e-value: 1.2
score: 18.2
coord: 92..122
e-value: 0.56
score: 19.3
coord: 60..91
e-value: 12.0
score: 14.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 10..125
e-value: 6.5E-21
score: 74.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065027-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top