TCONS_00065300-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065300-protein
Unique NameTCONS_00065300-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length239

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065300-protein ID=TCONS_00065300-protein|Name=TCONS_00065300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MVGRSRDEKNRHSSSIPPSLVPASKRRAPNGTGENSNRPSIQMRLVVSRD
MVHYCFDILISHLRRTDLPRSKHPKFTNDAYPLFVTWKTGKEYRLRGCIG
TFSALRLHDGLREYSLSSALRDSRFRPISLDEVNNLHCSVSLLTNFESEK
NYLDWEVGVHGIRIEFHNERGHRKSATYLPEVASEQGWTRNEAIDSLVKK
AGYYKTITEDFRKTIKLTRYRSEKIVLSYDEYCADNDVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040937XLOC_040937Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065300TCONS_00065300Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023473AMMECR1
IPR002733AMMECR1_domain
IPR027485AMMECR1_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1490.150coord: 157..220
e-value: 2.9E-31
score: 106.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
IPR023473AMMECR1TIGRFAMTIGR00296TIGR00296coord: 50..223
e-value: 1.1E-36
score: 124.3
IPR002733AMMECR1 domainPFAMPF01871AMMECR1coord: 52..224
e-value: 3.2E-50
score: 169.9
IPR002733AMMECR1 domainPROSITEPS51112AMMECR1coord: 40..236
score: 33.74
IPR002733AMMECR1 domainSUPERFAMILY143447AMMECR1-likecoord: 44..233
IPR027485AMMECR1, N-terminalGENE3D3.30.700.20coord: 41..156
e-value: 3.4E-43
score: 146.2

Blast
[Close]
BLAST of TCONS_00065300-protein vs. Swiss-Prot (Human)
Match: AMERL (AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 2.165e-89
Identity = 126/206 (61.17%), Postives = 156/206 (75.73%), Query Frame = 0 
Query:   29 PNGTGENSNRPSIQMRLVVSRDMVHYCFDILISHLRRTDLPRSKHPKFTNDAYPLFVTWKTGKEYRLRGCIGTFSALRLHDGLREYSLSSALRDSRFRPISLDEVNNLHCSVSLLTNFESEKNYLDWEVGVHGIRIEFHNERGHRKSATYLPEVASEQGWTRNEAIDSLVKKAGYYKTITEDFRKTIKLTRYRSEKIVLSYDEYCA 234
            PNGT   +        LVV+ +M  YCFD+L  HL     P+ + P+FTND YPLFVTWKTG++ RLRGCIGTFSA+ LH GLREY+L+SAL+DSRF P++ +E+  L CSVSLLTNFE   +YLDWEVGVHGIRIEF NE+G +++ATYLPEVA EQ W + + IDSL++K G+   IT +FRKTIKLTRYRSEK+ +SY EY A
Sbjct:   92 PNGTANTTKN------LVVTAEMCCYCFDVLYCHLY--GFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIA 289
The following BLAST results are available for this feature:
BLAST of TCONS_00065300-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AMERL2.165e-8961.17AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L P... [more]
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