TCONS_00065374-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065374-protein
Unique NameTCONS_00065374-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length372

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065374-protein ID=TCONS_00065374-protein|Name=TCONS_00065374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MENSSDVDSNDNETFKEEEGTTNESEPDEVPSQAINLNNPKAMKKLLQMS
TPSPQELDPDEEYCFESSTLYEDKNAFISKLIEKIKENPCLYDHSTFGWR
YPENKKEVWERIGKELQVEHITLEKEFKKLKDNYRKCLKRRSKAEKSKNQ
NKQLATCNFFEELSFLKGHFPPASDLEVRTESIQIPQPSVRQARTKTHTK
KSLTSLSMKKFSIQELNPNDISQTDIALMSTNASENNVTANNPQSLTPTK
IDQVGVGELETTKMITSDSSLHSTSSFDIQSGQAATQNDNTQLLNVRYFP
SGKLPNGMNSTHEPPEKKHKLHNGNMIEADPNIKDTHQLFCESLVEPLRS
LSPKKSKLAKMKIMQILYELEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040985XLOC_040985Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065374TCONS_00065374Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom
IPR004210BESS_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
IPR006578MADF domainSMARTSM00595118neu2coord: 80..171
e-value: 1.9E-12
score: 57.4
IPR006578MADF domainPFAMPF10545MADF_DNA_bdgcoord: 81..166
e-value: 2.6E-13
score: 50.0
IPR006578MADF domainPROSITEPS51029MADFcoord: 80..171
score: 13.297
IPR004210BESS motifPFAMPF02944BESScoord: 338..369
e-value: 4.2E-6
score: 26.4
IPR004210BESS motifPROSITEPS51031BESScoord: 334..372
score: 13.073

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065374-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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