TCONS_00066401-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00066401-protein
Unique Name	TCONS_00066401-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	752

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00066401-protein ID=TCONS_00066401-protein|Name=TCONS_00066401-protein|organism=Clytia hemisphaerica|type=polypeptide|length=752bp
MKHQFKRRLSAIATISGDIRPLDNHHNQTERKVLRPAIVSLKLPSIGNSN
QRSNTVLKSVPIASIRTNSSGKSTRQESYQDFNNGYRKKLPPILIKSRST
LNVIESTNKLAIWKKEDSICHTPHQENCLHNMTRRSRSIDIHGLSKTTIE
SLRPLPEKAEEPSPHHSTIQQHTLPGYGSTAFGHQVPPRLRGLSVESDEE
SFISEDKLSISDASSLGTIRSSSSFGSIQSVRTLGNTSTGRSSVYSWGND
DEFDKQAANKVWDIFEDVDQCLFQNSIKEGQGDPMKEECFDWKSSFKYIR
VTGRQLTPDHEEGTQIIPTALPTSHRNSDIDEDDDILSVNDGFYGDDEIE
SDTTSLGVYGNKAGILLDSEDVLPHLNEEVFAQHGQVEEFFAFDEKTIET
SRDSCKDMKMKRRAIPPITPQALARDMALSECFDHVWSQAVKTLSDLLKL
YIKARSVDRENKYSNVRDDLLESALTLHGTHDPYKMPPQLHSQMKMKPDL
SDLKDVMTIRSVSLKQRAPSTSMYRHEDDGQSRLGTSSSTMTQKTFGGKT
SSFLYDRMMSAKTPKRTIRLQPLQPPKTAGHVDSNIGEIRGTRLSNVTVG
NGQQSWVARNGTLPPLDRLGTTEELRKSPKRNTRASSAVNAPSKHSSQRD
RGGGGISMLPDSRPNTNHSYRSDVRTPHQFNRPASRSRDFPVNKLYGQSH
PQTINENSYLRISSHFRNDPPNQQEVDDFVLWGHGPPLISHQQRRGKTAN
QR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_041559	XLOC_041559	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00066401	TCONS_00066401	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022194	DUF3719

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022194	Protein of unknown function DUF3719	PFAM	PF12516	DUF3719	coord: 274..325 e-value: 1.6E-6 score: 27.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 517..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 600..692

Blast

[Close]

BLAST of TCONS_00066401-protein vs. Swiss-Prot (Human)
Match: F149B (Protein FAM149B1 OS=Homo sapiens GN=FAM149B1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 5.647e-21
Identity = 141/564 (25.00%), Postives = 234/564 (41.49%), Query Frame = 0

Query:  170 QQHTLPGYGSTAFGHQVPP-RLRGLSVESD--EESFISEDKLSISDASSLGTIRSSSSFGSIQSVRTLGNTSTGRSSVYSWGNDDEFDKQAANKVWDIFEDVDQCLFQNSIKEGQGDPMKEECFDWKSSFKYIRVTGRQ-LTPDHEEGTQII---PTALPTSHRNSDIDEDDDILSVNDG--FYGDDEIESDTTSLGVYGNKAGILLDSEDVLPHLNEEVFAQHGQVEEFFAFDEKTIET---SRDSCKDMKMKRRAIPPITPQALARDMALSECFDHVWSQAVKTLSDLLKLYIKARSVDRENKYSNVRDDLLESALTLHGTHDPYKMP--PQ------------LHSQMKMKPDLSDLKDVMTIRSVSLKQRAPSTSMYRHEDDGQSRLGTSSSTMT------QKTFGGKTSSFLYDRMMSAK--TPKRTIRLQPLQPPKTAGHVDSNIGEI-RGTRLSNV--TVGNGQQSWVARNGTLPPLDRLGTTEELRKSPKR-------NTRASSAVNAPSKHSSQRDRGGGGISMLPD--SRPNTNHSYRSD--------VRTPHQ 679
            Q   L G    A  H  PP +L  +S  SD  E+   S+ K  I+  SS  +  + +S  +  S    G ++ G SS +SWG   E D+ A  KV  +F  +D+ L++  +       ++EEC  W +SF ++R+ GRQ +TP   EG ++    P+A+  S+  +   E D  +    G   +         +S+    +   +  D ED        +    G +EE+ AFD   IE     + S    + ++   PPI P    ++  L+  FD VW + V  +  L + + +  + D E+  +  R D  ES+  L   H P  +P  PQ            L    + +P+++DL     +  + L+ R  S      + D +  +   SST+        +     TSS  Y    + +   P RT  L P+    +      ++ EI RG R+     ++ +   + ++RN  LPP+            P+R       ++RA SAV     +   ++R      +LPD   RPNT  S+  D        V  PHQ
Sbjct:   12 QSLELKGITKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSLSAFPSYTGAGISTEG-SSDFSWGYG-ELDQNATEKVQTMFTAIDELLYEQKLSV-HTKSLQEECQQWTASFPHLRILGRQIITPS--EGYRLYPRSPSAVSASYETTLSQERDSTIFGIRGKKLHFSSSYAHKASSIAKSSSFCSMERDEED-------SIIVSEGIIEEYLAFDHIDIEEGFHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVSCMEQLTRSHWEGFASDDESNVAVTRPD-SESSCVLSELH-PLVLPRVPQSKVLYITSNPMSLCQASRHQPNVNDL----LVHGMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRT--LHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGDSSRAQSAVVDEPNYQQPQER-----LLLPDFFPRPNTTQSFLLDTQYRRSCAVEYPHQ 550

The following BLAST results are available for this feature:

BLAST of TCONS_00066401-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00066401-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F149B	5.647e-21	25.00	Protein FAM149B1 OS=Homo sapiens GN=FAM149B1 PE=2 ...	[more]

You are here

TCONS_00066401-protein (polypeptide) - C. hemisphaerica