TCONS_00068031-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068031-protein
Unique Name	TCONS_00068031-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1274

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068031-protein ID=TCONS_00068031-protein|Name=TCONS_00068031-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1274bp
MFEKNLNDLVRGLRNNKGNESKYVTECLDEIKQELKQENMGLKANAVLKL
SYIQMLGYNISWAAFNIIEVMSSAKFIHKRIAYMAASQSFHADLDVLMLA
TNLIKKDMNSQNQYDAGVAMVGLSCFISPDLARDLASDIMNMMVSSRPYI
RKRSILLMYKVFLNFPEALRPAFPRLKEKLEDVDPGVQCAAVNVICELAR
KNPRNYLALAPLFFKLMTTSSNNWMLIKIIKLFGALCPLEPRLGKKLMEP
LTSLVHRSCSDIKQLRKEREFAKAAKRILDSSSRGRAKSNGDCNEGPTII
RHSNTQNTNAQRDTNNNAQTLNKDNKFSTTGISTSAMSLLYECINTVVAG
LPDHQASIQLCVSKLRLLIEDPDQNLKYLGLLLLNKILQTQPKLVLGHRD
LIMQCLDDRDESIRYRALDLIAGMISKKTLVDIVKKLMFHMEKAEGTGYR
DELLSKIITICSQSNYQYVTNFEWYIDTLVQLSAVDGTQYGKLIANQMLD
VTIRVKAIRKYAVPTFSALLAKPSLLTSLSEKHTSCEVLFASAWVAGEFT
EFHTDVQGIIKALLNPKVSSLPGHIQCVYVQTIAKLFSKVLTDNEMNGEE
EELETAANFIMEGLASFTQSSDLEVQDRSCCVLQLIKLVIKMKKEGVKCS
NDVSALFAEELLPVAPKAQKKVPIPEGLDLDKWINEPTAESDDSEEEDNK
PFFADDKPSASSSISSAPKERYQEPDAGEIEKAREIRKMFQESNPHYLKG
DIKKREDPNKPLVDDIPVKELDAPVALHVEGKGKGKKGKKGKKGKKGRKA
SESEDEPVYTSYEIAPVIDLGEGEAPEEMDQDDPHSLLNVDLDAPLGDHE
VLPVQTHRSSELKSSASEDKPARKGSKKGKKGKKEGTKKGRTQSKDSVDA
VDVKVKKTKKTKKKSAKQTEEENKATLLAQASEFAKERKESLSKGLQPNE
TGLMDVVTPIAEEPAPELGDPGMPAKEKKSKKKTKEGKEKKEKGTKEKKK
KKKSKEPEAETIVAPDTSANEDASLFMDMDDTTTHDPYAHYDTLCEDSNI
KLLYEIRANPMHKKQVIASIIFRNVTKHHIQKLEFNVIDSLSMKLERQAG
ASAHDPVLVPFILLPEMTNEGQFAFNVDSCVMAQHLRGTLTYILKQSDSS
TSEKVDFKIQFPVGVYILPNPISNNEFTSLLASGDLKEKQALKATLSDGR
SLEDVLREICNRLRVIVIEHINQGASMYGTTIQDHPICLLVKKVNDTTVT
VDGKSTDFQLLGAVLKEIKDLIEK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042471	XLOC_042471	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068031	TCONS_00068031	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0016192	vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030117	membrane coat

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030117	membrane coat
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01354	BLVR_2	coord: 725..843 e-value: 1.0E-11 score: 54.9
None	No IPR available	PFAM	PF06375	AP3D1	coord: 728..843 e-value: 3.1E-11 score: 43.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 741..1017
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 688..727
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..322
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 20..637 e-value: 2.2E-122 score: 409.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..671 e-value: 2.0E-105 score: 352.9
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 337..696 coord: 19..259

Blast

[Close]

BLAST of TCONS_00068031-protein vs. Swiss-Prot (Human)
Match: AP3D1 (AP-3 complex subunit delta-1 OS=Homo sapiens GN=AP3D1 PE=1 SV=1)

HSP 1 Score: 538.88 bits (1387), Expect = 5.263e-171
Identity = 285/577 (49.39%), Postives = 381/577 (66.03%), Query Frame = 0

Query:  333 STSAMSLLYECINTVVA-------GLPDHQASIQLCVSKLRLLIEDPDQNLKYLGLLLLNKILQTQPKLVLGHRDLIMQCLDDRDESIRYRALDLIAGMISKKTLVDIVKKLMFHMEKAEGTGYRDELLSKIITICSQSNYQYVTNFEWYIDTLVQLSAVDGTQYGKLIANQMLDVTIRVKAIRKYAVPTFSALLAKPSLLTSLSEKHTSCEVLFASAWVAGEFTEFHTDVQGIIKALLNPKVSSLPGHIQCVYVQTIAKLFSKVLTDNEMNGEEEELETAANFIMEGLASFTQSSDLEVQDRSCCVLQLIKLVIKMKKEGVKCSNDVSALFAEELLPVAPKAQKKVPIPEGLDLDKWINEPTAESDDSEEEDNKP--FFADDKPSASSSISSAPKERYQEPDAGEIEKAREIRKMFQESNPHYLKGDIK-KREDPNKPLVDDIPVKELDAPVALHVEGKGKGKKGKKGKKGKKGRKASESEDE------------------PVYTSYEIAPV--IDLGEGEAPE--------EMDQDDPHSLLNVDLDAPLGDHEVLPVQTHRSSELKSSASEDKP 871
            STSAMSLLYEC+NTV+A       G+P+H ASIQLCV KLR+LIED DQNLKYLGLL ++KIL+T PK V  H+DLI+QCLDD+DESIR RALDL+ GM+SKK L++IVKKLM H++KAEGT YRDELL+KII ICSQSNYQY+TNFEWYI  LV+L+ ++GT++G LIA QMLDV IRVKAIRK+AV   SALL    LL S ++++  CEVL+A+AW+ GEF+E   +    ++A+L P+V++LPGHIQ VYVQ + KL++ +L   E  GE E  +     +++ L  F QS+DLEVQ+R+ C+LQL+K + K++ + V  + +VSALFA EL PVAPKAQKKVP+PEGLDLD WINEP +   DSE ED +P   F +++          PK R  E D  E+ + RE RK  Q +NP Y+K     ++   + P V+ IPV ++D  V L V G     +  K ++ ++ R+  E +                    P  +  +IAP   +D+   E PE        + D +DP+  L++DLD PL D E LP+Q HR++E   S  +D P
Sbjct:  269 STSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHLLASSTQRNGICEVLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYVQNVVKLYASILQQKEQAGEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHIQKLQAKDVPVAEEVSALFAGELNPVAPKAQKKVPVPEGLDLDAWINEPLS---DSESEDERPRAVFHEEE-------QRRPKHRPSEADEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPMSDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVP 835

HSP 2 Score: 429.098 bits (1102), Expect = 3.735e-130
Identity = 189/260 (72.69%), Postives = 236/260 (90.77%), Query Frame = 0

Query:    1 MFEKNLNDLVRGLRNNKGNESKYVTECLDEIKQELKQENMGLKANAVLKLSYIQMLGYNISWAAFNIIEVMSSAKFIHKRIAYMAASQSFHADLDVLMLATNLIKKDMNSQNQYDAGVAMVGLSCFISPDLARDLASDIMNMMVSSRPYIRKRSILLMYKVFLNFPEALRPAFPRLKEKLEDVDPGVQCAAVNVICELARKNPRNYLALAPLFFKLMTTSSNNWMLIKIIKLFGALCPLEPRLGKKLMEPLTSLVHRSCS 260
            MF+KNL DLVRG+RN+K +E+KY+++C+DEIKQELKQ+N+ +KANAV KL+Y+QMLGY+ISWAAFNIIEVMS++KF  KRI Y+AASQSFH   DV+ML TN I+KD++S +QYD GVA+ GLSCF++PDLARDLA+DIM +M  ++PYIRK+++L+MYKVFL +PE+LRPAFPRLKEKLED DPGVQ AAVNVICELAR+NP+NYL+LAPLFFKLMT+S+NNW+LIKIIKLFGAL PLEPRLGKKL+EPLT+L+H + +
Sbjct:   13 MFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSA 272

HSP 3 Score: 173.711 bits (439), Expect = 9.079e-44
Identity = 91/240 (37.92%), Postives = 145/240 (60.42%), Query Frame = 0

Query: 1037 PYAHYDTLCEDSNIKLLYEIRANPMHKKQVIASIIFRNVTKHHIQKLEFNVIDSLSMKLERQAGASAHDPVLVPFILLPEMTNEGQFAFNVDSCVMAQHLRGTLTYILKQSDSSTSEKVDFKIQFPVGVYILPNPISNNEFTSLLASGDLKEKQALKATLSDG--RSLEDVLREICNRLRVIVIEHINQGASMYGTTIQDHPICLLVKKVNDTTVTVDGKSTDFQLLGAVLKEIKDLIEK 1274
            P + Y  L E+S +K+  +IR +     QV  +I+  N +   ++ +E +V+DSL+ ++ R  G+S HD V VPF L P ++NE Q+ F + S VMAQ L+GTL++I K  + +T EK+DF++ F    Y++  P  ++ F  LL SGDL    ++ +   DG   S +++L +IC      V+E ++  ASMY  +IQ H +CLLVKK  + +V+VDGK +D  LL  +L+E+K  + K
Sbjct:  918 PESSYSLLAENSYVKMTCDIRGSLQEDSQVTVAIVLENRSSSILKGMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQYVFTIQSIVMAQKLKGTLSFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDL----SMSSIKVDGIRMSFQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKK-GENSVSVDGKCSDSTLLSNLLEEMKATLAK 1152

The following BLAST results are available for this feature:

BLAST of TCONS_00068031-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068031-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AP3D1	5.263e-171	49.39	AP-3 complex subunit delta-1 OS=Homo sapiens GN=AP...	[more]

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TCONS_00068031-protein (polypeptide) - C. hemisphaerica