TCONS_00068167-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068167-protein
Unique NameTCONS_00068167-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length264

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068167-protein ID=TCONS_00068167-protein|Name=TCONS_00068167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MSRTSINDDDENLFKWLEGGKLLISIIFLGVGIFMVVLWAKRQILRLYLI
NKKGPIDQAGHAAPKGLRREIENSFNKISGLRLEPKLLSDPGQHEPLLNS
FVDERDDSSYKFRRKAFDLMSCLDELLSRVDFGLARKPSQNVREHLVSLQ
SPPYAPFEGKEYENLCEQVTRLYEHARYGAKEFGEQDYHVYSEKIDQLYD
RVHQKLLVPGSLVVHADHQHQVKTQSQCTSNVETELTSQVILPSTLVESK
TSGLRNRDGSKNIV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042547XLOC_042547Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068167TCONS_00068167Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010876NICE-3_prd
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010876NICE-3 predictedPFAMPF07406NICE-3coord: 16..199
e-value: 1.3E-36
score: 126.2
IPR010876NICE-3 predictedPRODOMPD320812coord: 20..191
e-value: 4.0E-15
score: 199.0

Blast
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BLAST of TCONS_00068167-protein vs. Swiss-Prot (Human)
Match: CA043 (Uncharacterized protein C1orf43 OS=Homo sapiens GN=C1orf43 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.514e-18
Identity = 69/239 (28.87%), Postives = 117/239 (48.95%), Query Frame = 0 
Query:   16 WLEGGKLLISIIFLGVGIFMVVLWAKRQILRLYLINKKGPIDQAGHAAPKGLRREIENSFNKISGLRLEPKLLSDPGQHEPLLNSFVDERDDSSYK--FRRKAFDLMSCLDELLSRVDF-GLARKP----SQNVREHLVSLQSPPYAPFEGKEYENLCEQVTRLYEHARYGAKEFGEQDYHVYSEKIDQLYDRVHQKLLVPGSLVVHADHQHQVK--TQSQCTSNVETELTSQVILPST 245
            WL G  +++ + +  +   ++ ++ KRQI+R  + +++GP    GH APK L+ EI+   +++  ++ EP+LL+D    +  L     + + S Y   +R KA D +       S + F    R P     +N R +L+ L++    PF+G   + L + +   YE ARYG   FG+ +Y  Y E + +L   V  ++   GS   H  HQ   K  TQS   S    ++T    LPS+
Sbjct:    7 WLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLAD---DDARLLQLETQGNQSCYNYLYRMKALDAIRT-----SEIPFHSEGRHPRSLMGKNFRSYLLDLRNTS-TPFKGVR-KALIDTLLDGYETARYGTGVFGQNEYLRYQEALSELATAVKARI---GSSQRH--HQSAAKDLTQSPEVSPTTIQVT---YLPSS 227
The following BLAST results are available for this feature:
BLAST of TCONS_00068167-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CA0433.514e-1828.87Uncharacterized protein C1orf43 OS=Homo sapiens GN... [more]
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