TCONS_00068639-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068639-protein
Unique Name	TCONS_00068639-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	531

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068639-protein ID=TCONS_00068639-protein|Name=TCONS_00068639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=531bp
MTTERLSERIQEGSSNTTTVRQRSKKTTKNMVPKHHSDNNDSGAENGIMN
PSKRSLKVLYKKRLDNEENEFSGSDFEIVDHNDFDDLQEINLLESEEADS
LIPNITADVDNNKESSFFIALQVFFPFFAAGLGTVAAGLLLDHVQHWKVY
MEIPEVYILVPALLGLKGNLEMTLASRLSTAANIGHMDSPKEKRSIVIGN
LILTQAQALVVAALASMAAVIFRWVPSDQFNIHHAFLMCASSLITASLAS
LLLGGVMCTVIILSKKYGINPDNVATPIAASLGDLVTLALLSFFSDFLHR
KIDDNVHLWIAPFICCLFTLMLPLWFYMAHHNKYTHTTLYNGWSPVIIAM
CISSGGGLILSYFVQRFKGIAVFSPVINGVGGNLVAVQASRLSTSLHLKV
PLGTLPDATNYGCIRTFCTGGGHSRTSRVLLAMSIPGHIIFLAIISSLKA
GHTSTTARFFCMYILAGFIQVAALLFICNWLVHILWKYRKDPDNYSIPYL
TALGDLLGTALLAIDFYLLFLMGDRDDDLGE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042811	XLOC_042811	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068639	TCONS_00068639	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006667	SLC41_membr_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006812	cation transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008324	cation transmembrane transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
molecular_function	GO:0008324	cation transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006667	SLC41 divalent cation transporters, integral membrane domain	PFAM	PF01769	MgtE	coord: 375..513 e-value: 1.1E-27 score: 96.8 coord: 160..291 e-value: 9.2E-24 score: 84.1
IPR006667	SLC41 divalent cation transporters, integral membrane domain	GENE3D	1.10.357.20		coord: 334..522 e-value: 7.4E-45 score: 152.2 coord: 114..302 e-value: 1.9E-52 score: 176.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	SUPERFAMILY	161093	MgtE membrane domain-like	coord: 115..295
None	No IPR available	SUPERFAMILY	161093	MgtE membrane domain-like	coord: 335..519

Blast

[Close]

BLAST of TCONS_00068639-protein vs. Swiss-Prot (Human)
Match: S41A2 (Solute carrier family 41 member 2 OS=Homo sapiens GN=SLC41A2 PE=1 SV=2)

HSP 1 Score: 454.521 bits (1168), Expect = 5.336e-155
Identity = 252/533 (47.28%), Postives = 340/533 (63.79%), Query Frame = 0

Query:   30 NMVPKHHSDNNDS--GAENGIMNPSKRSLKVLYKKRLDN--EENEFSGSDFEIVD-------HNDFDDLQEINLLESEEADSLI-----PNITADVDNN----------KESSFFIALQVFFPFFAAGLGTVAAGLLLDHVQHWKVYMEIPEVYILVPALLGLKGNLEMTLASRLSTAANIGHMDSPKEKRSIVIGNLILTQAQALVVAALASMAAVIFRWVPSDQFNIHHAFLMCASSLITASLASLLLGGVMCTVIILSKKYGINPDNVATPIAASLGDLVTLALLSFFSDFLHRKIDDNVHLWIAPFICCLFTLMLPLWFYMAHHNKYTHTTLYNGWSPVIIAMCISSGGGLILSYFVQ--RFKGIAVFSPVINGVGGNLVAVQASRLSTSLHLKVPLGTLPDATNYGC---IRTFCTGGGHSRTSRVLLAMSIPGHIIFLAIISSLKAGHTSTTARFFCMYILAGFIQVAALLFICNWLVHILWKYRKDPDNYSIPYLTALGDLLGTALLAIDFYLLFLMGDRDDDLGE 531
            +MVP  +  N +      NGI      +    +  R +   E + FS   F   +          +DD    N  +  E           +I++D D +          KESS  +ALQ+  PF  AG GTV+AG++LD VQHW+V+ ++ EV+ILVPALLGLKGNLEMTLASRLSTA NIG MDSP EK +++IGNL L Q QA VV  LA++AA+I  W+P  ++ + H+ L+C+SS+ TA +ASLL G +M  VI+ SKK GINPDNVATPIAAS GDL+TLA+L++ S  L+  ++   + +I+P +   F  + P+W  +A  +  T T L++GW PVI AM ISS GGLIL   V      GI V++PVING+GGNLVA+QASR+ST LHL    G LPD    GC    RTF   G ++++++VLL + IPGH+IFL  I  +K+GHTS T  F  +Y+    +QV  LL+I +W+VH  W+  KDPD++SIPYLTALGDLLGTALLA+ F+ L+L+GDRD D+G+
Sbjct:   44 SMVPVIYQKNQEDRHKKANGIWQDGLSTAVQTFSNRSEQHMEYHSFSEQSFHANNGHASSSCSQKYDDYANYNYCDGRETSETTAMLQDEDISSDGDEDAIVEVTPKLPKESSGIMALQILVPFLLAGFGTVSAGMVLDIVQHWEVFRKVTEVFILVPALLGLKGNLEMTLASRLSTAVNIGKMDSPIEKWNLIIGNLALKQVQATVVGFLAAVAAIILGWIPEGKYYLDHSILLCSSSVATAFIASLLQGIIMVGVIVGSKKTGINPDNVATPIAASFGDLITLAILAWISQGLYSCLE--TYYYISPLVGVFFLALTPIWIIIAAKHPATRTVLHSGWEPVITAMVISSIGGLILDTTVSDPNLVGIVVYTPVINGIGGNLVAIQASRISTYLHLHSIPGELPDEPK-GCYYPFRTFFGPGVNNKSAQVLLLLVIPGHLIFLYTIHLMKSGHTSLTIIFIVVYLFGAVLQVFTLLWIADWMVHHFWRKGKDPDSFSIPYLTALGDLLGTALLALSFHFLWLIGDRDGDVGD 573

The following BLAST results are available for this feature:

BLAST of TCONS_00068639-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S41A2	5.336e-155	47.28	Solute carrier family 41 member 2 OS=Homo sapiens ...	[more]

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TCONS_00068639-protein (polypeptide) - C. hemisphaerica