TCONS_00069019-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069019-protein
Unique Name	TCONS_00069019-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	462

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069019-protein ID=TCONS_00069019-protein|Name=TCONS_00069019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
MTNTTIQGAIMINTTLSPNNNVQDGPGGFPKVELMTSNMILIFSLLNIGI
FIIGLIGNILTILVIVSRKAMRRSIHYYTFNLCICDLTILLFFVPTQITT
INDDLRWTNGINLCRVSYGVIPTGLVTTIATLLCISIDRAYGLLKPFKWR
SSSRKSAKILITGTWTLSIILNLPLFFVIRLLPFGDGTFFCGEQWNPHYW
HFYYWLASFVLTFAIPLVCIFILQLVLVYTIKFKVKNRTFKKQNQRMANM
TVAIVLVFTFCSGMQHIMFFLSHFKVEMDKDTYLIVHCTGNLLVVLQAGI
NPFIYGKFRGDFSRGYKNMFKNVKPICKRLFVAEHKSGLINVVITPPSSE
SLHVSPDSEIGSSMLQIPIHRNYKYMINGKTIYPKKKGLREFRPKTQRII
NRNQENKNQRHSVNKALVENKMLPGNVKLFDDMKLFLDVSNKSRCSFTRE
LLNDTRETDILC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043007	XLOC_043007	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069019	TCONS_00069019	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000276	G protein-coupled receptor, rhodopsin-like	PRINTS	PR00237	GPCRRHODOPSN	coord: 205..228 score: 21.79 coord: 121..143 score: 23.62 coord: 42..66 score: 26.54 coord: 247..271 score: 20.39 coord: 156..177 score: 25.19 coord: 287..313 score: 22.56 coord: 75..96 score: 24.32
IPR000276	G protein-coupled receptor, rhodopsin-like	PFAM	PF00001	7tm_1	coord: 57..305 e-value: 2.8E-32 score: 111.9
None	No IPR available	GENE3D	1.20.1070.10		coord: 8..365 e-value: 2.9E-57 score: 193.5
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 36..328
IPR017452	GPCR, rhodopsin-like, 7TM	PROSITE	PS50262	G_PROTEIN_RECEP_F1_2	coord: 57..305 score: 31.726

Blast

[Close]

BLAST of TCONS_00069019-protein vs. Swiss-Prot (Human)
Match: QRFPR (Pyroglutamylated RFamide peptide receptor OS=Homo sapiens GN=QRFPR PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.914e-21
Identity = 80/299 (26.76%), Postives = 139/299 (46.49%), Query Frame = 0

Query:   41 LIFSLLNIGIFIIGLIGNILTILVIVSRKAMRRSIHYYTFNLCICDLTILLFFVP-TQITTINDDLRWTNGINLCRVSYGVIPTGLVTTIATLLCISIDRAYGLLKPF--KWRSSSRKSAKILITGTWTLSIILNLPLFFVIRL-----LPFGDGTFFCGEQWNPHYWHFYYWLASFVLTFAIPLVCIFILQLVLVYT--IKFKVKN----RT--------FKKQNQRMANMTVAIVLVFTFCSG---MQHIMFFLSHFKVEMDKDTYLIVHCTGNLLVVLQAGINPFIYGKFRGDFSR 314
            L   L  + IF + L GN L   V+   KAMR   + +  +L + DL I  F +P T +  I+D+  W  G  +C++   V  T +VT I T+ CI+++R  GL+ PF  KW+ ++R+ A  ++   W +++I+  P++ V +L       +      C E+W        Y     V+ F +PL+ + IL   + Y   IK +V +    RT          ++ +R   M V +V +F  C     + H+M   S+F+ E D  T  ++     ++    +  NP +Y     +F +
Sbjct:   46 LALVLTGVLIFALALFGNALVFYVVTRSKAMRTVTNIFICSLALSDLLITFFCIPVTMLQNISDN--WLGGAFICKMVPFVQSTAVVTEILTMTCIAVERHQGLVHPFKMKWQYTNRR-AFTMLGVVWLVAVIVGSPMWHVQQLEIKYDFLYEKEHICCLEEWTSPVHQKIYTTFILVILFLLPLMVMLILYSKIGYELWIKKRVGDGSVLRTIHGKEMSKIARKKKRAVIMMVTVVALFAVCWAPFHVVHMMIEYSNFEKEYDDVTIKMIFAIVQIIGFSNSICNPIVYAFMNENFKK 341

The following BLAST results are available for this feature:

BLAST of TCONS_00069019-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
QRFPR	2.914e-21	26.76	Pyroglutamylated RFamide peptide receptor OS=Homo ...	[more]

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TCONS_00069019-protein (polypeptide) - C. hemisphaerica