TCONS_00069062-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069062-protein
Unique Name	TCONS_00069062-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	809

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069062-protein ID=TCONS_00069062-protein|Name=TCONS_00069062-protein|organism=Clytia hemisphaerica|type=polypeptide|length=809bp
MSSGDEVEAFEITDQDLESELNPGFHRKQTKEQAIYGVWANSDDEEEGNY
QKKTRKKFGLQADVPMGFVSGGKFHDEDEEKEQEAEVKAEDMGFPALKKE
PVKEQSQQEKTKNKSYTFNDPSLRKASKNFGAWEKYSNGFASKMMKKMGY
KEGKGLGKTEDGIVEPVQAHKRGGRGAIGHYGAERPKNKFSSEPVYDTDE
EEQNEIKKEIEQLHQWKKTGQEKKTPKYVYKTAEEVKKSGKTKSLAPLLS
HSNVKVVDMTGKETKVLQGYSSLSHQHAKPDTEDNVKPAEEEKDFDVPEL
IYNLNLLVDLTESDILQTDRQLRFERDNIVNYTHEVERLEKVCLEEENEI
DNLEHVLTIIERCKQGLQPDKDEPLSLEGLIQCFQTLQDSFYEEFKLYDL
DKLVVPLGFPLLTRHFSSWNPFKDPTHGIDVVKLWKEVLQDNHQTQYTQS
NNEQRSMEPYERLLWELWMPHIRTAVNLWLPKTSDALIPVMEAWTQLLPD
WINSNILDQLILPKLQAAVDAWNPLTDPTPVHSWLHPWLPIMANRLEGFY
PQIRQKFGAALLNWHPSDPSAKVILEPWIKVFSKGTMEAFLLRTIYPKLE
QCVIEFQINPHQQDLQPFNWLMAWIGVISFHHMVSLLEKHFFPKWLQVLR
QWLTNTPNYDEVTKWYLGWKTMFSEDFMSHPTLKEHFNRALQLMNQAVTG
TVQPGARENVAYLTSTERRREAEAAALKEKIQASSQGSGGMPSRFKDLVE
KAAEDNGLLFIPLPNRRHEGKAVYTFGKCVIYIDRDVVFYSTEGKWKPSS
LQELVDLAR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043045	XLOC_043045	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069062	TCONS_00069062	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000467	G_patch_dom
IPR022159	STIP/TFIP11_N
IPR022783	GCFC_dom
IPR024933	STIP

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 322..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..121
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 135..181 e-value: 5.0E-13 score: 59.3
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 138..180 e-value: 8.0E-15 score: 54.4
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 137..183 score: 14.665
IPR022159	Tuftelin interacting protein, N-terminal domain	PFAM	PF12457	TIP_N	coord: 5..90 e-value: 2.8E-17 score: 62.9
IPR022783	GC-rich sequence DNA-binding factor domain	PFAM	PF07842	GCFC	coord: 377..649 e-value: 2.1E-83 score: 280.0
IPR024933	Septin and tuftelin interacting protein	PIRSF	PIRSF017706	TFIP11	coord: 1..809 e-value: 1.1E-270 score: 898.4

Blast

[Close]

BLAST of TCONS_00069062-protein vs. Swiss-Prot (Human)
Match: TFP11 (Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1)

HSP 1 Score: 710.679 bits (1833), Expect = 0.000e+0
Identity = 373/830 (44.94%), Postives = 527/830 (63.49%), Query Frame = 0

Query:   10 FEITDQDLESELNPGFHRK-QTKEQAIYGVWANSD-DEEEGNYQKKTRKKFGLQADVPMGFVSGGKFHDEDEEKE------QEAEVKAEDMGFPALKKEPVKEQSQQEKTKNKSYTFNDPSLRKASKNFGAWEKYSNGFASKMMKKMGYKEGKGLGKTEDGIVEPVQAHKRGGRGAIGHYGAERPKNKFSSEPVYDTDEEEQNEIKKEIEQLHQWKKT-GQEKKTPKYVYKTAEEVKKSGKT--KSLAPLLSHSNVKVVDMTGKETKVLQGYSSLSHQHAKPD------TEDNVKPAEEEK--DFDVPELIYNLNLLVDLTESDILQTDRQLRFERDNIVNYTHEVERLEKVCLEEENEIDNLEHVLTIIERCKQGLQPDKDEPLSLEGLIQCFQTLQDSFYEEFKLYDLDKLVVPLGFPLLTRHFSSWNPFKDPTHGIDVVKLWKEVLQDNHQTQYTQSNNEQRSMEPYERLLWELWMPHIRTAVNLWLPKTSDALIPVMEAWTQLLPDWINSNILDQLILPKLQAAVDAWNPLTDPTPVHSWLHPWLPIMANRLEGFYPQIRQKFGAALLNWHPSDPSAKVILEPWIKVFSKGTMEAFLLRTIYPKLEQCVIEFQINPHQQDLQPFNWLMAWIGVISFHHMVSLLEKHFFPKWLQVLRQWLTNTPNYDEVTKWYLGWKTMFSEDFMSHPTLKEHFNRALQLMNQAVTGTV----QPGARENVAYLTSTERRREAEAAALKEKIQASSQGSGGM-------PSRFKDLVEKAAEDNGLLFIPLPNRRHEGKAVYTFGKCVIYIDRDVVFYSTEGKWKPSSLQELVDLAR 809
            FEITD DL++E NP   R  QTKE+A YGVWA  D D+E  ++  K  + +      P+ F+S G      EE E      +E  VK +D  FP        +     K   K +        K+  +FG+WE+++ G   K+++KMGY  G+GLGK   GI+ P++A +R G+GA+G YG+ER        PV D++EE + E +KE   L QW+K     KK PKY YKT EE+K  G+   K  AP    S VKV+DMTG+E KV   YS +SH+H  PD      ++   +  +E K   F +PEL +NL LL+DLTE +I+Q DRQL++ERD +VN  HE+E++ +V   EE  I NL  VL ++E C++ +QPD   PL+L+   + F+TLQD +YEE+++ D   L V + +PL+  +F  W+P KD T+G +++  WK +L+++   Q      +  S + + RL+WE+WMP +R  V  W P+  D ++  +++W  ++P WI  NILDQLI PKLQ  V+ WNPLTD  P+HSW+HPWLP+M  RLE  Y  IR K  +AL  WHPSD SAK+IL+PW  VF+ G+ EAF+++ I PKL  C+ E  INPHQQ +  F W++ W G+IS   +V LLEKHFFPKWLQVL  WL+N+PNY+E+TKWYLGWK+MFS+  ++HP++K+ FN AL +MN+AV+  V    QPGAREN+AYLT TERR++ +  A++E+ +A +    G+       P  FKDL+E  AE++ ++F+P+  +RHEGK +YTFG+ VIYIDR VVF   E  W P+SLQ L+D+A+
Sbjct:   24 FEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSDDERPSFGGKRARDYS----APVNFISAGLKKGAAEEAELEDSDDEEKPVKQDD--FPKDFGPRKLKTGGNFKPSQKGFAGG----TKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTTQSMQDFPVVDSEEEAEEEFQKE---LSQWRKDPSGSKKKPKYSYKTVEELKAKGRISKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNVPDDGLPLQSQQLPQSGKEAKAPGFALPELEHNLQLLIDLTEQEIIQNDRQLQYERDMVVNLFHELEKMTEVLDHEERVISNLSKVLEMVEECERRMQPDCSNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKEWDPLKDCTYGTEIISKWKSLLEND---QLLSHGGQDLSADAFHRLIWEVWMPFVRNIVTQWQPRNCDPMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPWLPLMQARLEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETKAEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK 837

The following BLAST results are available for this feature:

BLAST of TCONS_00069062-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069062-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TFP11	0.000e+0	44.94	Tuftelin-interacting protein 11 OS=Homo sapiens GN...	[more]

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TCONS_00069062-protein (polypeptide) - C. hemisphaerica