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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00069102-protein ID=TCONS_00069102-protein|Name=TCONS_00069102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=743bp
MMFSAAGKATSRCVRQSLMNHVKIRKYSISNDLDKSKIRNIGISAHIDSG
KTTLTERILYYTGRIQSMHEVRGKDQVGATMDFMELERQRGITIQSAATY
TQWKDHNINIIDTPGHIDFTVEVERALRVLDGAVLVLCSVGGVQSQTLTV
NRQMKRYNVPCLAFINKLDRTGANPLRVVSQLQNKLNHNAALLHLPIGLE
SNLKGLVDLVEEKAVYFEGDYGSEMVFDEIPKEMRSEAGERREMLIEAVA
NADEMLGEIFLEERVPTIEELTAGIRRSVIQRTFTPVLLGSALKNKGVQP
LLDAVLQYLPNPTEVDNYAINNDNDGEKFLLDSSGDSSKPFLGLAFKLEA
GRYGQLTYIRSYQGELSKGQQIVNTRTGRKVKVPRLVQMHAADMKDITKT
SAGDICALFGVDCSSGDTFVSENSSSLSMESIYVPDAVISLAVEPKNKND
VESFSKALNRFSREDPTFRVHVDKESKETIISGMGELHLEIYTERMRTEY
NCEVVTGKPKVAFRETIMKPTVKFDFQHKKQSGGSGQYGKVVGRIEKFDD
ESENTKLEFIDGTIGMNIPKNFIPSIEKGFFEACDRGFLTGHKMCGFRFI
LEDGAHHAVDSSELAFRLAAIGAVKQAFEQANPCVLEPVMAVEIVAPNET
QGAVMGGVNKRKGVVTGTEAADEYFTVYADVPLNEMFGYSNELRSLTQGK
GEFSMEFKRYSQAHPQTQAQLADAHSGGGASGGSGGKKQKGKK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
| GO:0003746 | translation elongation factor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006414 | translational elongation |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006414 |
translational elongation |
| cellular_component |
GO:0005622 |
intracellular |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
| molecular_function |
GO:0003746 |
translation elongation factor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000795 | Transcription factor, GTP-binding domain | PRINTS | PR00315 | ELONGATNFCT | coord: 89..97
score: 65.43
coord: 109..119
score: 64.3
coord: 161..170
score: 39.79
coord: 40..53
score: 60.64
coord: 125..136
score: 44.1 |
| IPR000795 | Transcription factor, GTP-binding domain | PROSITE | PS51722 | G_TR_2 | coord: 36..313
score: 70.727 |
| IPR005517 | Translation elongation factor EFG/EF2, domain IV | SMART | SM00889 | EFG_IV_2 | coord: 510..632
e-value: 4.1E-47
score: 172.5 |
| IPR005517 | Translation elongation factor EFG/EF2, domain IV | PFAM | PF03764 | EFG_IV | coord: 509..632
e-value: 1.0E-35
score: 122.0 |
| IPR005517 | Translation elongation factor EFG/EF2, domain IV | CDD | cd01434 | EFG_mtEFG1_IV | coord: 513..632
e-value: 3.17587E-53
score: 178.784 |
| IPR000640 | Translation elongation factor EFG, V domain | SMART | SM00838 | EFG_C_a | coord: 634..721
e-value: 1.7E-31
score: 120.6 |
| IPR000640 | Translation elongation factor EFG, V domain | PFAM | PF00679 | EFG_C | coord: 635..720
e-value: 1.9E-26
score: 91.8 |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 | PFAM | PF03144 | GTP_EFTU_D2 | coord: 354..419
e-value: 2.2E-9
score: 37.5 |
| None | No IPR available | GENE3D | 2.40.30.10 | | coord: 304..424
e-value: 3.9E-24
score: 84.3 |
| None | No IPR available | PFAM | PF00009 | GTP_EFTU | coord: 37..310
e-value: 9.6E-64
score: 214.4 |
| None | No IPR available | GENE3D | 3.30.70.240 | | coord: 648..725
e-value: 1.6E-27
score: 95.1 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 30..303
e-value: 2.3E-60
score: 203.5 |
| None | No IPR available | GENE3D | 3.30.70.870 | | coord: 426..521
e-value: 5.9E-32
score: 109.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 712..743 |
| None | No IPR available | CDD | cd04091 | mtEFG1_II_like | coord: 341..421
e-value: 1.20559E-41
score: 145.887 |
| None | No IPR available | CDD | cd01886 | EF-G | coord: 40..312
e-value: 2.02426E-172
score: 497.785 |
| IPR009022 | Elongation factor G, III-V domain | PFAM | PF14492 | EFG_II | coord: 434..508
e-value: 1.6E-32
score: 111.3 |
| IPR009022 | Elongation factor G, III-V domain | SUPERFAMILY | 54980 | EF-G C-terminal domain-like | coord: 637..722 |
| IPR009022 | Elongation factor G, III-V domain | SUPERFAMILY | 54980 | EF-G C-terminal domain-like | coord: 432..510 |
| IPR005225 | Small GTP-binding protein domain | TIGRFAM | TIGR00231 | TIGR00231 | coord: 37..211
e-value: 1.3E-28
score: 97.8 |
| IPR004540 | Translation elongation factor EFG/EF2 | TIGRFAM | TIGR00484 | TIGR00484 | coord: 31..715
e-value: 1.4E-266
score: 884.0 |
| IPR004540 | Translation elongation factor EFG/EF2 | HAMAP | MF_00054_B | EF_G_EF_2_B | coord: 34..725
score: 101.57 |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup | GENE3D | 3.30.230.10 | | coord: 522..647
e-value: 5.3E-37
score: 126.4 |
| IPR031157 | Tr-type G domain, conserved site | PROSITE | PS00301 | G_TR_1 | coord: 82..97 |
| IPR009000 | Translation protein, beta-barrel domain | SUPERFAMILY | 50447 | Translation proteins | coord: 279..304
coord: 336..423 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 35..311 |
| IPR020568 | Ribosomal protein S5 domain 2-type fold | SUPERFAMILY | 54211 | Ribosomal protein S5 domain 2-like | coord: 509..633 |
Blast
BLAST of TCONS_00069102-protein vs. Swiss-Prot (Human)
Match: EFGM (Elongation factor G, mitochondrial OS=Homo sapiens GN=GFM1 PE=1 SV=2) HSP 1 Score: 995.727 bits (2573), Expect = 0.000e+0 Identity = 463/707 (65.49%), Postives = 572/707 (80.91%), Query Frame = 0
Query: 23 KIRKYSISNDLDKSKIRNIGISAHIDSGKTTLTERILYYTGRIQSMHEVRGKDQVGATMDFMELERQRGITIQSAATYTQWKDHNINIIDTPGHIDFTVEVERALRVLDGAVLVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRTGANPLRVVSQLQNKLNHNAALLHLPIGLESNLKGLVDLVEEKAVYFEGDYGSEMVFDEIPKEMRSEAGERREMLIEAVANADEMLGEIFLEERVPTIEELTAGIRRSVIQRTFTPVLLGSALKNKGVQPLLDAVLQYLPNPTEVDNYAINNDNDGE----KFLLDSSGDSSKPFLGLAFKLEAGRYGQLTYIRSYQGELSKGQQIVNTRTGRKVKVPRLVQMHAADMKDITKTSAGDICALFGVDCSSGDTFVSENSSSLSMESIYVPDAVISLAVEPKNKNDVESFSKALNRFSREDPTFRVHVDKESKETIISGMGELHLEIYTERMRTEYNCEVVTGKPKVAFRETIMKPTVKFDFQHKKQSGGSGQYGKVVGRIEKFDDESENTKLEFIDGTIGMNIPKNFIPSIEKGFFEACDRGFLTGHKMCGFRFILEDGAHHAVDSSELAFRLAAIGAVKQAFEQANPCVLEPVMAVEIVAPNETQGAVMGGVNKRKGVVTGTEAADEYFTVYADVPLNEMFGYSNELRSLTQGKGEFSMEFKRYSQAHPQTQAQLADAH 725
K ++S S + KIRNIGISAHIDSGKTTLTER+LYYTGRI MHEV+GKD VGA MD MELERQRGITIQSAATYT WKD NINIIDTPGH+DFT+EVERALRVLDGAVLVLC+VGGVQ QT+TVNRQMKRYNVP L FINKLDR G+NP R + Q+++KLNHNAA + +P+GLE N KG+VDL+EE+A+YF+GD+G + + EIP E+R+ A + R+ LIE VAN+DE LGE+FLEE++P+I +L IRR+ ++R+FTPV LGSALKNKGVQPLLDAVL+YLPNP+EV NYAI N D K L++SS D+S PF+GLAFKLE GR+GQLTY+RSYQGEL KG I NTRT +KV++ RL +MHA M+D+ + AGDICALFG+DC+SGDTF + +S LSMESI+VPD VIS+A++P NKND+E FSK + RF+REDPTF+V+ D E+KET+ISGMGELHLEIY +R+ EY C +TGKPKVAFRETI P V FDF HKKQSGG+GQYGKV+G +E D E + TKLEF D T G NIPK F+P++EKGF +AC++G L+GHK+ G RF+L+DGAHH VDS+E++F A GA+KQA A C+LEP+MAVE+VAPNE QG V+ G+N+R GV+TG + ++YFT+YADVPLN+MFGYS ELRS T+GKGE++ME+ RY P TQ + + +
Sbjct: 31 KACRWSSSGVIPNEKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSKLNHNAAFMQIPMGLEGNFKGIVDLIEERAIYFDGDFGQIVRYGEIPAELRAAATDHRQELIECVANSDEQLGEMFLEEKIPSISDLKLAIRRATLKRSFTPVFLGSALKNKGVQPLLDAVLEYLPNPSEVQNYAILNKEDDSKEKTKILMNSSRDNSHPFVGLAFKLEVGRFGQLTYVRSYQGELKKGDTIYNTRTRKKVRLQRLARMHADMMEDVEEVYAGDICALFGIDCASGDTFTDKANSGLSMESIHVPDPVISIAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHLEIYAQRLEREYGCPCITGKPKVAFRETITAP-VPFDFTHKKQSGGAGQYGKVIGVLEPLDPE-DYTKLEFSDETFGSNIPKQFVPAVEKGFLDACEKGPLSGHKLSGLRFVLQDGAHHMVDSNEISFIRAGEGALKQALANATLCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYSRYQPCLPSTQEDVINKY 735
The following BLAST results are available for this feature:
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