TCONS_00069759-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069759-protein
Unique NameTCONS_00069759-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069759-protein ID=TCONS_00069759-protein|Name=TCONS_00069759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MAVNVFNTGATSDNLSRHEMLTWINDSLQSNFTKIEQMASGAAYCQFLDM
LFENCVPMKKVKVQAKLEHEYIVNWKLLQNGFKKVGVDKTIPVDKLIKAR
FQDNFEFCQWFKKFFDANYAGQEYDALAIRGGLQPIADGKKPAAAGSRSM
AAPSKSRAAPPKRTAAPKAAPVSKAPSSKGSGVSQQEMDTVTAELSEMKT
SVDGLEKERDFYFGKLRDIEVLCQEEGAVGTPLSEKVLAILYATEDGFAP
PEEEEGAEYIDGGEPEEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043437XLOC_043437Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069759TCONS_00069759Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004953EB1_C
IPR001715CH-domain
Vocabulary: Molecular Function
TermDefinition
GO:0008017microtubule binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 188..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..189
IPR004953EB1, C-terminalPFAMPF03271EB1coord: 205..243
e-value: 7.9E-17
score: 61.1
IPR004953EB1, C-terminalPROSITEPS51230EB1_Ccoord: 180..250
score: 16.728
IPR004953EB1, C-terminalSUPERFAMILY140612EB1 dimerisation domain-likecoord: 188..249
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 8..131
e-value: 4.4E-53
score: 177.9
IPR001715Calponin homology domainPFAMPF00307CHcoord: 16..118
e-value: 8.6E-10
score: 38.7
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 1..130

Blast
[Close]
BLAST of TCONS_00069759-protein vs. Swiss-Prot (Human)
Match: MARE3 (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens GN=MAPRE3 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 1.476e-97
Identity = 143/274 (52.19%), Postives = 188/274 (68.61%), Query Frame = 0 
Query:    1 MAVNVFNTGATSDNLSRHEMLTWINDSLQSNFTKIEQMASGAAYCQFLDMLFENCVPMKKVKVQAKLEHEYIVNWKLLQNGFKKVGVDKTIPVDKLIKARFQDNFEFCQWFKKFFDANYAGQEYDALAIRGGLQPIADGKKPAAA---GSRSM---AAPSKSRAAPPKR--------TAAPKAAPVSKAPSSKGSGV-SQQEMDTVTAELSEMKTSVDGLEKERDFYFGKLRDIEVLCQEEGAVGTPLSEKVLAILYATEDGFAPPEEEEGAEY 259
            MAVNV++T  TS+NLSRH+ML W+NDSL  N+TKIEQ+ SGAAYCQF+DMLF  CV ++KVK QAKLEHEYI N+K+LQ  FKK+GVDK IPV+KL+K +FQDNFEF QWFKKFFDANY G++Y+ L  R G Q +A    P       S+ +   A P ++    PK           AP        PS++  G  +  ++  +  +L ++K +VDGLEKERDFYF KLRDIE++CQE  +  +P+   ++ ILYATE+GFAPPE++E  E+
Sbjct:    1 MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQG-QDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIEEH 273
The following BLAST results are available for this feature:
BLAST of TCONS_00069759-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MARE31.476e-9752.19Microtubule-associated protein RP/EB family member... [more]
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