TCONS_00070056-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070056-protein
Unique NameTCONS_00070056-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length463

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070056-protein ID=TCONS_00070056-protein|Name=TCONS_00070056-protein|organism=Clytia hemisphaerica|type=polypeptide|length=463bp
RKRDADGNVERYKARLVAQGFTQKNGIDYDETFSPVVRFESIRTIIALAA
KYKLRLHQIDVTTAFLNGTLEEDIYMKQPEGFEVEGQKHMVCKLKKSIYG
LKQSPRCWNQALDEQLKKMGFVPSMNDPCIYTLNTGGEVFILAVYVDDII
LGGKSTERIQQIINEIAQRFDVKDMGELKYFLGVKIVYLDDGSIWIGQPS
YIKAVLHKFNMENSKSVATPVETGTKLMKATDNDKLFDQEMYQSAVGCLL
YLSTKTRPDIAFAVSNVAKFTAKPTIDHWTAVKRIMRYLNGTIYCGLRYY
GETQLVGYSDADWAGDLNDRKSTSGYVYKISGAAVSWMSKKQTCVALSTA
EAEYMALSMASQEAIWLRRLLHDLNEKVDGPITIYEDNQSTICMAENPKF
HGRAKHIDIKHHYVRNQVHEKNIELKYCPSEYMVADMLTKGLTRVQFNKL
KDMIGIHDLTDSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043617XLOC_043617Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070056TCONS_00070056Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450Expect = 2.8E-73 / Score = 246.4Expect = 3.2E-6 / Score = 26.4Score = Score = SequencePF07727G3DSA:3.30.70.270cd09272SSF56672
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..221
e-value: 2.8E-73
score: 246.4
NoneNo IPR availableGENE3D3.30.70.270coord: 22..176
e-value: 3.2E-6
score: 26.4
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 306..444
e-value: 3.53682E-81
score: 248.922
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 8..202
coord: 232..410

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070056-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450Sequence
Match NameE-valueIdentityDescription
back to top