TCONS_00004018 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004018
Unique NameTCONS_00004018
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3819

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004018 ID=TCONS_00004018|Name=TCONS_00004018|organism=Clytia hemisphaerica|type=transcript|length=3819bp
ATTCATTGAGACATTTTATAATTATTGGAactatttgaaaaaatgaatat
ttttgctgttttgtttctttgtttgtGCTTGTTATTATTTGTGAGATGCC
AGAAATTGATATCGTGCCCATGCCCCTTTTGTGGGAAAGACTCTAAAGGA
CGTGCTGAAGCAAATTGCGCAAACTTCCGATTTTCGACAGTTCGTAAACC
ATTCCCGAAGGACATGTATACCATTAATATGCAGTACAATCGAATCAAAG
AGGTCAAAACAGACGATTTTGGCGAGTTGCCTGTTTTAAATCTAATAAGA
CTAGATGACAATTTGATTGCTAGAATACAAGAAAATGCTTTCGCTGGAAT
GTCGAATTTAGACGAATTAGTTTTATCAGCTAATCAATTGAAAACGATCC
CAGATAAACTGGTCCATCCAGATGCTCCTTTGAGTCAGGGCATCAAACTG
AAAGCCaacaaaattgaacattttccAACGTTGCTTTTAAAACGTACCCG
AAGACTTGTTAACGTTGAAGATAACCCAATAAAATGTGATTGTGATTCGG
TTATCCCCGATGATATCAAAGATAAAGCACTCGGTACATGTACCTCACCT
TCGAATTTGAAAGGTCGTTCCGTGTCAAGTCTAACTTTTTCGGATGTGGG
TTGTGATGTTTGTGAGGACGTCGATTGCAACCAAGGCTCGTGTTATACAC
TTGATCGTAAAGAAGCCTTGTGTAAATGCTTTGATGGTTGGACAGGTTCA
GATTGTTCTATAGATTTAAGCACCACAACCACGACGACGACCACAACCAC
AACTACTAAGAAACCCACTACAACCACCACCACAACCACTCCCACCACCA
CAACCACTCTTACCACAACCATCCCCACCACCACAACAACTCTCACAACA
ACTACTATAACTACCACCACCACTCCCACCACAACCACCACCACTCCCAC
CACCACAACCACAGCTACTCCTACCACAACTCCAACTACAACAACTCCTA
CCACAACCACAACCACTCCCACCACCACAATCACTCCCACAACAACTACT
ATAACTACTACCACCACTCCCACCACAACCACAACCACTCCCAACACAAC
CACAACCACTCCCACCACCACAACCACAACCACAACTACTCCCACCACAG
CTATCACAACCCCTACCACAACTACAACCACTCCCACCACCACAACCACA
ACCATTCCCACTACAACCACAACCACTCCCACCACCACAACGACAACCAC
TCCCACTACAACCACAACCACAACCACTCCCACCACAACCACAACCACTC
CCACCACAACCACAGCCACTCCCACCACAACCACTCCCACTACAACCACA
ACCAATCCCACCACCACAACTACTCCCACCACAACTACGACAACTCCAAC
TACAACTTTAACTACTACAACTCCCACCACCACTCCAACCCCAACTACTC
CCACCACTCCATCCACAACAACTCCCACCGACACGCTTACCACTTCAACA
ATTCCTACCACTACAGCTCCCACAGCCCCCACCACAACCACTACAACCAC
GACCAAGAAGACCACATCCATCACCAAGAGACCAACTACAATCACGACCA
CCACTCCTAATACCTCTAAGAAGCCCACTACAGTCGTCACTGAGAAACCT
GAAACTACGACTGCAATCAAAAAGCTTACTATCGTCACCAAAAAGCCTAC
TTTCAGCAGCACAAAAAAGAAGTTCACCACCATCATTGCTTCCACGAAGA
AACCTTTGATTAACACTACTAAAAACAAGGAAGCCGAGAAATTAAAAGTG
GACTGTGGGAACAAAATAGAATGTCGAGCAACAGTGGAGCGTTTGGTGAA
AGATTTAAAATCACTTTCCATTCAAACACCTGAAGAATATGATAAGTTTG
CGAAACTTGTTCACAAGATGGTGGACAAAAGTATTGGCAGTGACCACGAT
GACTTACAGAAGGTTTTTCCTAAAGTCATCTGTTTGGTGGACATCTTGAT
GCAAGTCGACCAATTAATAACGGCCCAGGCCCAACACAAGTACGGGTCCT
CTAAGACTCTCCTCAACTCACTCAAGACAATGACCAAAAAAGTCGGAGAT
GGCTTCCAGACAAGCGAAAATGTTGAATTCCAAGTCTCAAAAGAAATGGT
CGGTATTGGAGTATGGGAGGTCCCTGTGACGGATGAGAAAGATGTTTTTG
TGATCGGTGGCTATAGCAACAAGACTTCATATGTTGATATCAAGATTCAA
AAGCCATCTCTTGATGATACAAGCATACAAAGTGTTATGAGGATTCCACC
AACGGCTTTGAAGGAGCGTCAAAATTCTTACATATCCTCAATCAACTATC
AAAATAGTGGACTGTTCCTTACAAAGAACGAATTGAATAATCTGCTGGAT
GGAAACGAAAATATAGAAACAAAAGGGAAGAAACACAATATCTCTGATGC
ACAAACGAGTAATATCGTAGATGGAAATGTGTTCGCCGTTTCTATTGGTG
AAACTTCCATCTCCAACCTCCAACAGCCAATCACGCTTCTCTTTCGTAAT
CAAACAGAATTGAAGGCGAATGATACTTGTAAATTCTGGCGTTTCGCGTA
TGAGAATGACAGGCATCACGGTCAATGGTCTGACGAAGGATGTCATCGAA
TCACAACAACCAACATCACTGGCTTCATCAAATGCCAATGTGATCATCTC
ACCAACTTTGCATTGATCATCAATTCTGACCAGGAATTTTACAATCCATA
CGCAATTCAGATTGTGACATACGTTGGTTGTGGGATTTCAATCGCTTCTC
TCTTCGTCACTCTTCTGGTTTATGTCTTCTTCAGTAAAATCAATCGTAAA
CTTGCACCAAAGTTGTTAATCTGTTTATCATCGTCGCTATTGATTCTtct
catcattttcatcatcggAGCTGAACGAAACGCCAAGACGTACCACGTGT
GCCAGTTGATGGCCGTTTTGATTCACTATTTCACTCTTTCCACTTTCTGT
TGGATGGCCTGTGAAAGCTTCAACTTGTATCGAAACttcattaatatttt
caaaCGGACCCGTAACGAGAATGGTATACTGGTGAAGATGTCGCTTTTCT
CTTGGGGTGTTCCTCTAGTCATCGTTGTCATTACCATGGTAACAAGCCTC
GAAGAATATGGCAACGCATATGTatgTGTTGTGCACGGATTCAGTTTTTA
CTATGGTGTTCTTTTGCCCGTTGGTTTGATCACCCTTGGCAACTGGATCG
TCCTAGTCCTTTCCCTCAGGGGTATGCGAAGAGCGAAGATTCTGAAACGA
AGTCGAAGAAAACGCGACCAAGAGAATCAACAGTGGTTACATTTCGTACG
CGCCGCTACTTGTGCTACCATCTTGGGTTTGACGTGGACGTTCGGTATTT
TAGCAGTGGGTTACCTAAAGACAACTTTCCAATGGTTGTTCTGTATTTTC
AACTCGTTGCAAGGGTTCGCCATATTTTTGCTGTTTGTGGTGAATAACAA
GGAAGCGAAACGCGAGATCTACAAATGGTACAAGGGAGAACGATTGAATA
GCGATAGTGCTGAACTTTCGAGTACTGGAAAACCTGCCtcaaatttttga
atgaaatatgCGAGTGAACGAGTGATCATGGAAAAATCTCTATGAGTAAA
TATTTTGAGAATTGAAGacaagaaactttttttcaaatcagCAATGTTTT
GGCTAAAACTCGTGTAAATTTCTTTCCACGAGAGTTTCTCCCATTTGAAA
tagatattttttcataagaagttTTCTTAACCAGACAAGTAAAAAAATTA
GTAATTCCTTCCTGTTTTA
Run BLAST on NCBI

transcript from alignment at sc0000039:238635..244830+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004018 ID=TCONS_00004018|Name=TCONS_00004018|organism=Clytia hemisphaerica|type=transcript|length=6196bp|location=Sequence derived from alignment at sc0000039:238635..244830+ (Clytia hemisphaerica)
ATTCATTGAGACATTTTATAATTATTGGAactatttgaaaaaatgaatat ttttgctgttttgtttctttgtttgtGCTTGTTATTATTTGTGAGATGCC AGAAATTGATATCGTGCCCATGCCCCTTTTGTGGGAAAGACTCTAAAGGA CGTGCTGAAGCAAATTGCGCAAACTTCCGATTTTCGACAGTTCGTAAACC ATTCCCGAAGGACATGTATACCATTAATATGCAGTACAATCGAATCAAAG AGGTCAAAACAGACGATTTTGGCGAGTTGCCTGTTTTAAATCTAATAAGA CTAGATGACAATTTGATTGCTAGAATACAAGAAAATGCTTTCGCTGGAAT GTCGAATTTAGACGAATTAGTTTTATCAGCTAATCAATTGAAAACGATCC CAGATAAACTGGTCCATCCAGATGCTCCTTTGAGTCAGGGCATCAAACTG AAAGCCaacaaaattgaacattttccAACGTTGCTTTTAAAACGTACCCG AAGACTTGTTAACGTTGAAGATAACCCAATAAAATGTGATTGTGATTCGG TTATCCCCGATGATATCAAAGATAAAGCACTCGGTACATGTACCTCACCT TCGAATTTGAAAGGTCGTTCCGTGTCAAGTCTAACTTTTTCGGATGTGGG TTGTGATGTTTGTGAGGACGTCGATTGCAACCAAGGCTCGTGTTATACAC TTGATCGTAAAGAAGCCTTGTGTAAATGCTTTGATGGTTGGACAGGTTCA GATTGTTCTATAGATTTAAGCACCACAACCACGACGACGACCACAACCAC AACTACTAAGAAACCCACTACAACCACCACCACAACCACTCCCACCACCA CAACCACTCTTACCACAACCATCCCCACCACCACAACAACTCTCACAACA ACTACTATAACTACCACCACCACTCCCACCACAACCACCACCACTCCCAC CACCACAACCACAGCTACTCCTACCACAACTCCAACTACAACAACTCCTA CCACAACCACAACCACTCCCACCACCACAATCACTCCCACAACAACTACT ATAACTACTACCACCACTCCCACCACAACCACAACCACTCCCAACACAAC CACAACCACTCCCACCACCACAACCACAACCACAACTACTCCCACCACAG CTATCACAACCCCTACCACAACTACAACCACTCCCACCACCACAACCACA ACCATTCCCACTACAACCACAACCACTCCCACCACCACAACGACAACCAC TCCCACTACAACCACAACCACAACCACTCCCACCACAACCACAACCACTC CCACCACAACCACAGCCACTCCCACCACAACCACTCCCACTACAACCACA ACCAATCCCACCACCACAACTACTCCCACCACAACTACGACAACTCCAAC TACAACTTTAACTACTACAACTCCCACCACCACTCCAACCCCAACTACTC CCACCACTCCATCCACAACAACTCCCACCGACACGCTTACCACTTCAACA ATTCCTACCACTACAGCTCCCACAGCCCCCACCACAACCACTACAACCAC GACCAAGAAGACCACATCCATCACCAAGAGACCAACTACAATCACGACCA CCACTCCTAATACCTCTAAGAAGCCCACTACAGTCGTCACTGAGAAACCT GAAACTACGACTGCAATCAAAAAGCTTACTATCGTCACCAAAAAGCCTAC TTTCAGCAGCACAAAAAAGAAGTTCACCACCATCATTGCTTCCACGAAGA AACCTTTGATTAACACTACTAAAAACAAGGAAGCCGAGAAAGTAAGTTAT AATTTCTTTACTGATTCTTTCTAGcgttagcgagcacctcactaaaaact tggatttttcatctcgtttatttgtgagttccactttgacgattgtcgaa aaatagaagcctttcaagtgctttgacgcaaattcgattattttgctact gcagcttcgaaagttaaaatttgacgtcgaaaaatcgaatgtttagagcc cgaaaacccagGCTCAAAACATNgtgacgtcaaaaaatcgaatatttaga gcccgaaaaccccggctcaaaacattcgaaaaagtcgcaaagtggaatag acgttgaTTGCgttaaaaaaacgcgggtgacatctaatttaggctattct AGCGTCTGTTATGAAAAACTTTCTTATACGtattattttaaagaaatggG CCATTGGTTATATTTGAGGTCGGCTGTTTAACTTCGGAATCGCTCCCCTT TTCAGTTAAAAGTGGACTGTGGGAACAAAATAGAATGTCGAGCAACAGTG GAGCGTTTGGTGAAAGATTTAAAATCACTTTCCATTCAAACACCTGAAGA ATATGATAAGTTTGCGAAACTTGTTCACAAGATGGTGGACAAAAGTATTG GCAGTGACCACGATGACTTACAGAAGGTTAGTCTTCCCTTTCGACAACTT TTTACACGAAGTGTACCACCAAAAATTTGTacacaaaaagtaaaaatacg TAATAAAGTAAGTCctacaaaatttgaaatatatatttttaatattttat tcttTAGGTTTTTCCTAAAGTCATCTGTTTGGTGGACATCTTGATGCAAG TCGACCAATTAATAACGGCCCAGGCCCAACACAAGTACGGGTCCTCTAAG ACTCTCCTCAACTCACTCAAGACAATGACCAAAAAAGTCGGAGATGGCTT CCAGACAAGCGAAAATGTTGAATTCCAAGTCTCAAAAGAAATGGTCGGTA TTGGAGTATGGGAGGTCCCTGTGACGGATGAGAAAGATGTTTTTGTGATC GGTGGCTATAGCAACAAGACTTCATATGTTGATATCAAGATTCAAAAGCC ATCTCTTGATGATACAAGCATACAAAGTGTTATGAGGATTCCACCAACGG CTTTGAAGGAGCGTCAAAATTCTTACATATCCTCAATCAACTATCAAAAT AGTGGACTGTTCCTTACAAAGAACGAATTGAATAATCTGCTGGATGGAAA CGAAAATATAGAAACAAAAGGGAAGAAACACAATATCTCTGATGCACAAA CGAGTAATATCGTAGATGGAAATGTGTTCGCCGTTTCTATTGGTGAAACT TCCATCTCCAACCTCCAACAGCCAATCACGCTTCTCTTTCGTAATCAAAC AGAATTGAAGGCGAATGATACTTGTAAATTCTGGCGTTTCGCGTATGGTA GGTGTNATCAAACAGAATTGGAGGCGAATGATACTTGTAAATTCTGGCGT TTCGCGTATGGTAGGTGTTCTGAGTATAGTTTTGTAGCAAACTTACATGA AAACCAACGAAATAGTAAAGCAATGGATTGATAGGAGTAGAAAAGCTTGT CCAATTTCTTGCTACCTAATTGGTCCTGAAAACCCTACACCCTTCATAAT ATAGTTAGGGAAGGAAGTAACTTCGTAGAGAAATTCCGAAACAGAATCAA ACTTAGGACTAATAAAGACAcactaaaaatatatatttcccCCAAAGTAA TTGGTTGAAATAGACACTTTCTCGGCACTAGAGagtattttaaaataaaa tttgattattGTCTTGACACACTCTAAACATTTGTTAACCCTCCATTCAT TAGAGAATGACAGGCATCACGGTCAATGGTCTGACGAAGGATGTCATCGA ATCACAACAACCAACATCACTGGCTTCATCAAATGCCAATGTGATCATCT CACCAACTTTGCATTGATCATCAATTCTGACCAGGAATTTTACAATCCAT ACGCAATTCAGATTGTGACATACGTTGGTTGTGGGATTTCAATCGCTTCT CTCTTCGTCACTCTTCTGGTTTATGTCTTCTTCAGGTAAGAATCTCTAAC AGCCAGAAAGGGTTATTATTATTGACTCTTGGATGGAAAATGAGGCCACT TTTTCCCATCTGAAACGCGTGAaccgcgtggtttttacacaaacacccga ttgaaagtaaaatcgtAAAATCTTTCGCTAGATTTAGGAAAATATAATGT GGTAGAACAAAGAAATCATCTTTTGAGACCAAGACTTTTAATTTAAGGTT CTAACTAACTTCTCACTGGAGTTATGTCGACCAAATACTCTGCTTTCAGG GGGCCCCTTTGGAATTTTGTAACATAAATTTGATCGAGTTACTTACACAC TTACTTTTATAAAAACCTGTCAATTACTTTCAATATCTGTTAAGCCGTTC CCGGCATTGGTAGATAATATCGTGCTTTTAATGTCTAAAATAGTTCTAAA AGGGTTCTTTGTGACGCAGTGCACGTGAAAAGATGACCCCCAAAGCAGGT CAACTAAAGATCCTGGAATTTATCTTGCCTGACAATTGCATGCAATTCAT TTGATTTATTCCAGGATATTCAAGAAGGAAATATCTTGGGAAATCAGATT TATGAAATGTTTAATTGCAACTCCCtgataaattatttttagtttgtctt ttgatttcccaaagctttctttctatttttttttatggTGTCCGACCGAT GTCCGGTATTTAAGCCTGAACATCAATTATGTTTTTTCCTGCTATGTTAT GTGCCTTGTCACCTGTTCCTTCtaaaaagattatttttgtttgttctttt gGTTCTTCCTGTTGGCTTATGACTATGTCAAGTTGTTTTGTTTTAATATC TGATGGTATTGCGCGGGAGGGTAGTTGAAATCATCATTCCCTAATCACTT TAATACCCGTTatcaaagaaatatatttttcaataatattataatttttt taactgcTGTGGACAAAGTTTGCTCTTTGCATAAGAGAGCTTGAGGCTGA TTATAAATTTGTGATATCAGATACAATTAATCTTCCCGTTTCAGTAAAAT CAATCGTAAACTTGCACCAAAGTTGTTAATCTGTTTATCATCGTCGCTAT TGATTCTtctcatcattttcatcatcggAGCTGAACGAAACGCCAAGACG TACCACGTGTGCCAGTTGATGGCCGTTTTGATTCACTATTTCACTCTTTC CACTTTCTGTTGGATGGCCTGTGAAAGCTTCAACTTGTATCGAAACttca ttaatattttcaaaCGGACCCGTAACGAGAATGGTATACTGGTGAAGATG TCGCTTTTCTCTTGGGGTGAGTCTCTCCTAACCTTTGTAGATAGAATCTG AACTTTTTGCTTCtcctttaaagtttaaagttctcaaacaaatgaaaatg aaaatttccccTAGCCCTCAAGTAATTAATCTTTCATTTTTTCGTTATTC TTTCTTTACGTCAGTCTGCATCATCGAAAACACATTTCGCTTCCCACCTC CTCCTTCCTGTAAACTTCATTCATCATTCTAACTTCACTTGTTTTTCTCT CCTCTCTTGTATAGGTGTTCCTCTAGTCATCGTTGTCATTACCATGGTAA CAAGCCTCGAAGAATATGGCAACGCATATGTGTAAGTCTTTTACTCTCCC CAAGGCTAACCAAGTCGTAATATGGTTGTCTTAGCTCATTCTCGACTTTT ACCGAGGTTGTACATCAAACCTTTTAAAtttcatcttattttttttctag atgTGTTGTGCACGGATTCAGTTTTTACTATGGTGTTCTTTTGCCCGTTG GTTTGATCACCCTTGGCAACTGGATCGTCCTAGTCCTTTCCCTCAGGGGT ATGCGAAGAGCGAAGATTCTGAAACGAAGTCGAAGAAAACGCGACCAAGA GAATCAACAGTGGTTACATTTCGTACGCGCCGCTACTTGTGCTACCATCT TGGGTTTGACGTGGACGTTCGGTATTTTAGCAGTGGGTTACCTAAAGACA ACTTTCCAATGGTTGTTCTGTATTTTCAACTCGTTGCAAGGGTTCGCCAT ATTTTTGCTGTTTGTGGTGAATAACAAGGAAGCGAAACGCGAGATCTACA AATGGTACAAGGGAGAACGATTGAATAGCGATAGTGCTGAACTTTCGAGT ACTGGAAAACCTGCCtcaaatttttgaatgaaatatgCGAGTGAACGAGT GATCATGGAAAAATCTCTATGAGTAAATATTTTGAGAATTGAAGacaaga aactttttttcaaatcagCAATGTTTTGGCTAAAACTCGTGTAAATTTCT TTCCACGAGAGTTTCTCCCATTTGAAAtagatattttttcataagaagtt TTCTTAACCAGACAAGTAAAAAAATTAGTAATTCCTTCCTGTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002257XLOC_002257Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004018-exon-sc0000039-1491911889:238635..240425TCONS_00004018-exon-sc0000039-1491911889:238635..240425Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:238635..240425TCONS_00004018-exon-sc0000039-1510915933:238635..240425Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:238635..240425TCONS_00004018-exon-sc0000039-1575043694:238635..240425Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1491911889:240890..241060TCONS_00004018-exon-sc0000039-1491911889:240890..241060Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:240890..241060TCONS_00004018-exon-sc0000039-1510915933:240890..241060Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:240890..241060TCONS_00004018-exon-sc0000039-1575043694:240890..241060Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1491911889:241192..241831TCONS_00004018-exon-sc0000039-1491911889:241192..241831Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:241192..241831TCONS_00004018-exon-sc0000039-1510915933:241192..241831Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:241192..241831TCONS_00004018-exon-sc0000039-1575043694:241192..241831Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1491911889:242238..242469TCONS_00004018-exon-sc0000039-1491911889:242238..242469Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:242238..242469TCONS_00004018-exon-sc0000039-1510915933:242238..242469Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:242238..242469TCONS_00004018-exon-sc0000039-1575043694:242238..242469Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1491911889:243479..243750TCONS_00004018-exon-sc0000039-1491911889:243479..243750Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:243479..243750TCONS_00004018-exon-sc0000039-1510915933:243479..243750Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:243479..243750TCONS_00004018-exon-sc0000039-1575043694:243479..243750Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1491911889:243999..244065TCONS_00004018-exon-sc0000039-1491911889:243999..244065Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:243999..244065TCONS_00004018-exon-sc0000039-1510915933:243999..244065Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:243999..244065TCONS_00004018-exon-sc0000039-1575043694:243999..244065Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1491911889:244185..244830TCONS_00004018-exon-sc0000039-1491911889:244185..244830Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1510915933:244185..244830TCONS_00004018-exon-sc0000039-1510915933:244185..244830Clytia hemisphaericaexon
TCONS_00004018-exon-sc0000039-1575043694:244185..244830TCONS_00004018-exon-sc0000039-1575043694:244185..244830Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:238635..244830 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.77932 0.614958 0.60799 0.526377 0.291568 0.0535317 0.146899 0.126689 0.0423512 0.226458 0.0289402 0.0692544 0.172488 0.28507 1.77996 1.014 0.0884933 0.14297 0.0944103 0.0502476 0.150006 0.214436 0.183405 0.287825 0.24137 0.36544 0.0471078 0.0418015 0.177801 0.182986
Blast
BLAST of TCONS_00004018 vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 6.225e-35
Identity = 123/381 (32.28%), Postives = 197/381 (51.71%), Query Frame = 1
Query: 2428 KKHNISDAQTSNIVDGNVFAVSIGETSISNLQQPITLLFR----NQTELKANDTCKFWRFAYENDRHHGQWSDEGCHRITTTNITGFIKCQCDHLTNFALIIN---SDQEFYNPYAIQIVTYVGCGISIASLFVTLLVYVFFSKINRKLAPKXXXXXXXXXXXXXXXXXXGAERNA-KTYHVCQLMAVLIHYFTLSTFCWMACESFNLYRNFINIFKRTRNENGILVKMSLFSWGVPLVIVVITMVTSLEEYGN----AYVCVVHGFS-FYYGVLLPVGLITLGNWIVLVLSLRGMRRAKI-LKRSRRKRDQENQQWLHFVRAATCAT-ILGLTWTFGILAVGYLKTTFQWLFCIFNSLQGFAIFLLFVVNNKEAKREIYK 3525
            K  N++ A T+ +V  ++      +  I NL  P+ +  +    NQ   + +  C FW F  EN+   G W+  GC ++  TN+  +  CQCDHLT+F ++++   S  +  N   + ++TY GCGIS   L V ++ Y+ F K+ +    K+LI L ++LL+L ++F+I +  ++ +   VC   AV +HYF L +F WM  E+ ++Y   + +F      N IL K  L  WG+P ++V IT+    + YG        C +   S FY  V+    LI L N  +    L  +   K  ++++RRK        LH ++     T +LGLTW F   A G ++  F +LF IFN+LQGF IF+   V  KE+ RE ++
Sbjct: 2637 KTKNVTKALTTYVVSASIS----DDMFIQNLADPVVITLQHIGGNQNYGQVH--CAFWDF--ENNNGLGGWNSSGC-KVKETNVN-YTICQCDHLTHFGVLMDLSRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVGVCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFN-IYIPNYIL-KFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQLNSVKSQIQKTRRK------MILHDLKGTMSLTFLLGLTWGFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCV-MKESVREQWQ 2998          
The following BLAST results are available for this feature:
BLAST of TCONS_00004018 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG46.225e-3532.28Adhesion G-protein coupled receptor G4 OS=Homo sap... [more]
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