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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046671 ID=TCONS_00046671|Name=TCONS_00046671|organism=Clytia hemisphaerica|type=transcript|length=1002bp
TTTTATTCTAGTTTTTGATtgctttctttcaaaatatttctccgTTAAGC
GAATTCGTTTTGTAATAACCAAAGGCTTGTTGTATTTCTAACCTCGAGAA
AGTTGGACCTCCTACAATCTGTGACTAAATATTGTGGCAAGAATTCTCTT
CCCCCTTAGTATCAATGTTGATGGGTAGAGTGGCTGCCACCATGCTCAGA
AAAAGCTCACATCAACACTGATATTAGGGAGAAGCAATTTTTCCAGAAAT
TTCCACATATTTTTTCGCTGATTGTAGAAGTCGTTCATCGTCAAGCTTGG
GGAGATGTGGgtgtttcacattttgttttTCATACACCCTAATTTTAAAA
GAGAAATAGAGATTGTAGTTCAAAGTTCAGCAATCGTGAAAAGTATtgtg
ttatttttgtatttgcTTTTTCTGGATATTGGTATCTTACCGTTGAGATA
GGGACTTTTTTGTAACGTGATTACATGGTTTGGAAGTTTTTGCGTGATTG
CATGATGAGATGTCAAAACGTGattgtgatttgaaaaattttttagcCGT
GATACGTGAgctggactttttcaaagggatgcgtgattgtccattttttt
gcagatttgcgtgatcgtgattgaagacaaagaATTACgcgatatcgtga
tcagagttaccgctggtGGGAGGGCTCGTTGAGAGTGGCGTTGGTATGAA
AGATTCCAGTTACAATACAACTGTACATTTTTTACGTATGATTGTAGTTT
TTTATATGTTGAAGATATTTGTTAGGACTTTTTCTCTGATGAGTCATAAT
CATTATTACATGATGTAAATCTATTTTGCAATGTGAAAACATTTACTTAA
CCTGactctcaaaataatttgattataaacaaaatttaatgtcaATGAAA
ACTTTATAATTCTTCTACTACCATTCTTGTTTTGTACAAGATACTCTTAG
GGTGCATTTATAGCGAGTCTTTCGTTAGCCAGACTGTTACAAGTAAGTCT
TG Run BLAST on NCBI transcript from alignment at scaffold_116:699478..700479+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046671 ID=TCONS_00046671|Name=TCONS_00046671|organism=Clytia hemisphaerica|type=transcript|length=1002bp|location=Sequence derived from alignment at scaffold_116:699478..700479+ (Clytia hemisphaerica)
TTTTATTCTAGTTTTTGATtgctttctttcaaaatatttctccgTTAAGC
GAATTCGTTTTGTAATAACCAAAGGCTTGTTGTATTTCTAACCTCGAGAA
AGTTGGACCTCCTACAATCTGTGACTAAATATTGTGGCAAGAATTCTCTT
CCCCCTTAGTATCAATGTTGATGGGTAGAGTGGCTGCCACCATGCTCAGA
AAAAGCTCACATCAACACTGATATTAGGGAGAAGCAATTTTTCCAGAAAT
TTCCACATATTTTTTCGCTGATTGTAGAAGTCGTTCATCGTCAAGCTTGG
GGAGATGTGGgtgtttcacattttgttttTCATACACCCTAATTTTAAAA
GAGAAATAGAGATTGTAGTTCAAAGTTCAGCAATCGTGAAAAGTATtgtg
ttatttttgtatttgcTTTTTCTGGATATTGGTATCTTACCGTTGAGATA
GGGACTTTTTTGTAACGTGATTACATGGTTTGGAAGTTTTTGCGTGATTG
CATGATGAGATGTCAAAACGTGattgtgatttgaaaaattttttagcCGT
GATACGTGAgctggactttttcaaagggatgcgtgattgtccattttttt
gcagatttgcgtgatcgtgattgaagacaaagaATTACgcgatatcgtga
tcagagttaccgctggtGGGAGGGCTCGTTGAGAGTGGCGTTGGTATGAA
AGATTCCAGTTACAATACAACTGTACATTTTTTACGTATGATTGTAGTTT
TTTATATGTTGAAGATATTTGTTAGGACTTTTTCTCTGATGAGTCATAAT
CATTATTACATGATGTAAATCTATTTTGCAATGTGAAAACATTTACTTAA
CCTGactctcaaaataatttgattataaacaaaatttaatgtcaATGAAA
ACTTTATAATTCTTCTACTACCATTCTTGTTTTGTACAAGATACTCTTAG
GGTGCATTTATAGCGAGTCTTTCGTTAGCCAGACTGTTACAAGTAAGTCT
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046671-exon-scaffold_116-1491911889:699478..700479 | TCONS_00046671-exon-scaffold_116-1491911889:699478..700479 | Clytia hemisphaerica | exon |
| TCONS_00046671-exon-scaffold_116-1510915933:699478..700479 | TCONS_00046671-exon-scaffold_116-1510915933:699478..700479 | Clytia hemisphaerica | exon |
| TCONS_00046671-exon-scaffold_116-1575043694:699478..700479 | TCONS_00046671-exon-scaffold_116-1575043694:699478..700479 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:699478..700479 + |
Blast
The following BLAST results are available for this feature:
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