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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046982 ID=TCONS_00046982|Name=TCONS_00046982|organism=Clytia hemisphaerica|type=transcript|length=1064bp
GTCTAGACAACTACTTTAATTTTAATTCTTGTTTCTTCTTGTAATTATAG
AGATGCTGGCGACACGAGGGTGCATGAACTAAATAAAAAGATTCGCACAA
AAACGAGTAAGTCCCTGCAATTATCACAACACTATTGGTATTGAACATCT
TGTCATTATAGAGATGCTGGCGACACGAGGGTGCATGAACTAAATAAAAA
GATTCGCACAAAAACGAGTAAGTCCCTGCAATTATCACAACACTATTGGT
ATTGAACATCTTGTCATTATAGAGATGCTGGCGACACGAGGGTGCATGAA
CTAAATAAAAAGATTCGCACAAAAACGAGTAAGTCCCTGCAATTATCACA
ACACTATTGGTATTGAACATCTTGTCATTATAGAGATGCTGGCGACACGA
GGGTGCATGAACTAAATAAAAAGATTCGCACAAAAACGAGTAAGTCCCTG
CAATTATCACAACACTATTGGTATTGAACATCTTGTCATTATAGAGATGC
TGGCGACACAAGGGTGCAtgaactgaataaaaagattCGCGCCAATGACG
AGTAAGCCCCTGAAATTATCACAACATATGGTCCGACAGAGGCACGAAGA
GAGAAGGTTTTCGGATCAGCTGCAAGAGAAATGAAAATGTAGaccaaaca
agcaacatgctgaatggacctacctgttgatcaaaatcagataaaaaagg
ACAAATATCAACAGAGTAAGAAAGTGTAGGAAGCAGCTTAGATTACCATG
AGATTAACTGTGAAGTATAGTTAAGGTGGTATGACTTATAATCGTAGATA
CTGGAGTGAATAAATATTTTGCCGTGGTTTCCCTATTGACGATAAAGAGT
GATTTTCACCAAAGTCCGAAAAAACCCATTTTAGTTtctggcccaaattt
gcccattttatatcactatgcaaaaaacaagagaaaataCCAAGCCGATC
ACGAAAAATGCTCAAtttccctaaatatgacaaaagggaatttccctaaa
taagaaaacctgattcttacggccaaaaaaaatttccagaaaaaataacT
TGAGCCACTTTTTG Run BLAST on NCBI transcript from alignment at scaffold_119:77956..79019- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046982 ID=TCONS_00046982|Name=TCONS_00046982|organism=Clytia hemisphaerica|type=transcript|length=1064bp|location=Sequence derived from alignment at scaffold_119:77956..79019- (Clytia hemisphaerica)
GTCTAGACAACTACTTTAATTTTAATTCTTGTTTCTTCTTGTAATTATAG
AGATGCTGGCGACACGAGGGTGCATGAACTAAATAAAAAGATTCGCACAA
AAACGAGTAAGTCCCTGCAATTATCACAACACTATTGGTATTGAACATCT
TGTCATTATAGAGATGCTGGCGACACGAGGGTGCATGAACTAAATAAAAA
GATTCGCACAAAAACGAGTAAGTCCCTGCAATTATCACAACACTATTGGT
ATTGAACATCTTGTCATTATAGAGATGCTGGCGACACGAGGGTGCATGAA
CTAAATAAAAAGATTCGCACAAAAACGAGTAAGTCCCTGCAATTATCACA
ACACTATTGGTATTGAACATCTTGTCATTATAGAGATGCTGGCGACACGA
GGGTGCATGAACTAAATAAAAAGATTCGCACAAAAACGAGTAAGTCCCTG
CAATTATCACAACACTATTGGTATTGAACATCTTGTCATTATAGAGATGC
TGGCGACACAAGGGTGCATGAACTGAATAAAAAGATTCGCGCCAATGACG
AGTAAGCCCCTGAAATTATCACAACATATGGTCCGACAGAGGCACGAAGA
GAGAAGGTTTTCGGATCAGCTGCAAGAGAAATGAAAATGTAGACCAAACA
AGCAACATGCTGAATGGACCTACCTGTTGATCAAAATCAGATAAAAAAGG
ACAAATATCAACAGAGTAAGAAAGTGTAGGAAGCAGCTTAGATTACCATG
AGATTAACTGTGAAGTATAGTTAAGGTGGTATGACTTATAATCGTAGATA
CTGGAGTGAATAAATATTTTGCCGTGGTTTCCCTATTGACGATAAAGAGT
GATTTTCACCAAAGTCCGAAAAAACCCATTTTAGTTTCTGGCCCAAATTT
GCCCATTTTATATCACTATGCAAAAAACAAGAGAAAATACCAAGCCGATC
ACGAAAAATGCTCAATTTCCCTAAATATGACAAAAGGGAATTTCCCTAAA
TAAGAAAACCTGATTCTTACGGCCAAAAAAAATTTCCAGAAAAAATAACT
TGAGCCACTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046982-exon-scaffold_119-1575043694:77956..79019 | TCONS_00046982-exon-scaffold_119-1575043694:77956..79019 | Clytia hemisphaerica | exon |
| TCONS_00046982-exon-scaffold_119-1510915933:77956..79019 | TCONS_00046982-exon-scaffold_119-1510915933:77956..79019 | Clytia hemisphaerica | exon |
| TCONS_00046982-exon-scaffold_119-1491911889:77956..79019 | TCONS_00046982-exon-scaffold_119-1491911889:77956..79019 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:77956..79019 - |
Blast
The following BLAST results are available for this feature:
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