TCONS_00048281 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00048281
Unique Name	TCONS_00048281
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3572

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_142:194641..201562+
coding sequence from alignment at scaffold_142:194641..201562+

transcript sequence

>TCONS_00048281 ID=TCONS_00048281|Name=TCONS_00048281|organism=Clytia hemisphaerica|type=transcript|length=3572bp
AATTCTTAATTCATCAAGAAGATTGATCAAGAAAGAAATTCAAGATGAAG
CTGTTTTTCCTCGTGCTTTCCTTATTGGTGGTCGAACAAAGATGTCAAGT
ATCCGAACAACAATTCCAATCCGTCAAATCAACATTGGCTGCACTGTCAC
GTCAAGTTATGCTCCaacaatttttcactgaaacaCGTGTCCGTACTGAA
GGTCAATCAGGTTTAAAAGTCAACCGACAACGAAGCAATGGTTTAAAAAA
CTACCATATCAACACCCATACTGGTAGATCCGCAGCTGCAATTCACGAGC
ATGCTAATAATGACCGTACTGTAGGAATGGGAGAACTTACAGCTGTCCTT
AATGGGATTGAATTTAAGACAAGACACAACGATTACCGATTGTACATGCC
TCACCGAACATCTCAAAACTTCAATGCGTACGAGAAAGTACCATTCCCTG
ATGTACCACCACAAGTCGAAGCTAAAGAAACCATCGATGAACAAATCGCC
GAAATGAGAGAATACTTCAAAGCTTGGAGAAATCAAGATCCAAAACACCG
CGACTATAAACCATACTTCAAAGCTACGTTGTGCTACTTAGAAGGTGCCT
GGACTGCATCAGCACAAAAAATTGACGAGCCTTTTGCATCTGATCGTCAT
TTTGTAGATGCAAAATCATGGATGGAACTTCACGAGAAATCAAGATATAT
TGCTTACTCTGGAACCAAATCGCGACAAGAGAATCTCTCGTTCTTACCAA
CCAAAATTATGGGTTTAGTCAACGATACAATCCCTAACTTTGCCCAATGG
AATTATCGTATCATGTGTCATCCACTGAAACGTCACTTGCCAACCAAACG
ATTGAGAGTTATAGAAGATTTATCAGCTCGCATGAGGAACAACAAAGACA
TCCTGAGACACGCTCTCTCACGATCTGCGCGTTACCAACTCAACACTCAA
GATCAAGATACTTTCAGAGAAAGACCAGAAAGCTGGAAAACTCTCCTTGA
TGAACTCATGGAAGAAATCCCTGGCAAAGATAATTATCAAGttgatTTGG
AGGATGAAGGTTTAGATGGTAAAGCAATGCAATTGGATGGAAGTAAACTC
AATGCTGGTTATTATCACAGATGGTTCACTATTGGTGCAGATGCTATGGG
ATCGGTCAAACAACATCGTGGTTACAATGATGACTACATGTTTGCTGCTC
TCAATACACAAGAGAAGATTGCCGGCGTTGAATTCaacaaatgtgtcaaa
aataagGGAAATAAGGGAAAAAAGGAATGCCAAATGTTCAGACAAAAATG
GTCATATGCAATCCCATTGGAGATCATCTACATGACACCGTTGTATAAAT
GGAATCCTTACAAATTGAAGCACCATGGTGACCAAACAACTGCTAATCTG
AAAATCATCAATGGCAACGGCAAACGAAATGGTAATTGCGCAGCAGGCGC
TGCCAAGGCTTATACTGGCATCAACAGCCGTAATTTCTACATGACACCTG
CAGCATTCTACTCTGGTGCTTCTGTGGAGAGCAGTGCAGCTGATACAGCA
CGTGGTGTTACGTGTGTATTGGATCAAGATGGCGTCGAAAGACAAGTCAG
AGCCGCTGGAACACACATTTTCCTACCACAAATCAAAGATGTTGGTGTTT
TGAGAACCAGATATCCAATCTTTCCAGTTCACGGTGAAGGATCATCTGTA
TGGAAAGAATTGAACGCTGTCAGAGAAGTCACCATGAATGAAGAACAATG
GCAAAAGATGTACTGGAAAAATGCTGACCTCGACTCCGGTAATGAAGACA
CAACACTGTTGATGGGAGAATCAACCTGCGCATGCGCACCACGACACACC
CATGAAATCAAATTGGACGCAGCTGAAGTACAAATGTTGAAAGGTGGCCA
TACTTTGACCAAGGAGTCTACCACAACTAATGCTCATTTCCATTCAGTAC
AAATTCGATATGAGCCggacaagaaatttttctatttcacTTCCTGTGAC
GCCAAATATCAATGCTGGGATAAACACGTCAAACAATTTGTTATCTCAGA
TAGttaaatacaatttttaatACTTGTGAAGTAGAATGTGTTAGAACACA
CCCATATTTTATTAATACACCCTTCACTAGATTCATTTATAACGTAAATA
TATAATACGCATGAGCATACatgaaaatgatttgaaattcTTTAACTAAA
AATACCCCTCTGAAATCTTTGTTAGTCATTCTGACATGTATAATTGTTAG
GTACAGTAAACTCACGCTTATATGAGCTTCTTTTTACGAATCTTTCTTAT
AATTTGAACTTTTTCTCATTTCCTTTCTGTGAGAAACCTTCTCTTAAAAt
aatactctctataattcgaatgtctTTGTAATTGTAACAAATTAGATTCC
cagttcgagttcgaattagcgaaagtCAACTGTATCACAAGTATAAATTG
CCAACAACAACCAAAGAGCTCTCTGAAAATTACCGTCAGCTTCTATATCT
CTATGTTTTCATCATGGTAATTATAGGAAATGTCTAAATGCAGTGTTTCT
CAACCAACCATGTTCTCCGAACGGGTTTTCTTCTTCTAATAAAGATCACG
TGTATGATCACGTGTTTTTCATATccttaaaattcatgaaaatgacTCTT
CTCAATGTCCCACGGGCTATCAGTTATTCTCGCCATTCTACTAGACATTC
GAACAAGAAATCTTTACAGGTACCTTTATAGGTTCAAATGGAGCGCTTCa
attctattttttctttttcaacaaaatggcagctttttcaggattttctt
cAAGTTCATGCATCGTTTTCATGTCACGTTTAGCGATCAGATTTCGACTT
CGTTTTATTCTTCTTTGTAGAAGTTCATTATATAAATCCCACCAAGACGC
CTTATCAGTATGATTTGTCACTGATTTGATAGCCTTTCCAGTTGTAGCAC
CATGAGGCACTAAAGTCTTTTTAGTTAAAGGTACGCGTACCGTAAAACGA
ACCAGCTTCGGTTTATCAGCACAATAATCACGAACATAAATGACTTCATT
TTCGTCTAATTGCCAATTATAAATCACAAACTCATCTAAAAATCCTCGGA
AAGTCTCGTCACCCACACTTGCTTCGTTATCCCAATTTGTCGGTAAATCT
TCTCGTTTGTCGGGACTTGCTATTTTCTCGAGTTTCAAAATACCGTTAAC
GAAGATTTTGCCGACtccattttcattattataGGTGGCCGTCAAGTGTG
TCCATAAGCCCTCTGgcactaaaattttattttgagacCACATGTCAATT
ATTTCAGGAACACTCTCAATATCGGTACCAATGGCAAACCGTACACCGCC
ATCGATGACTTGTAATCGGTATCCAATATTTCCTTTATCACTTTCAGTAG
TGAAAATATTATGAACACCACGTGTGCTGTTTAACATCACCCAGACCGTG
ATTGAGATTTTGGATGTGGGTAAACCACGTACTGGGACACGCTGAATATC
GAGTTGAGGGTCCGGACCTTGAGTCAAATCCAAACAATAACCACATTTGC
CGCAATCTTCTTTCTGTTTCGC

Run BLAST on NCBI

protein sequence of TCONS_00048281-protein

>TCONS_00048281-protein ID=TCONS_00048281-protein|Name=TCONS_00048281-protein|organism=Clytia hemisphaerica|type=polypeptide|length=670bp
MKLFFLVLSLLVVEQRCQVSEQQFQSVKSTLAALSRQVMLQQFFTETRVR
TEGQSGLKVNRQRSNGLKNYHINTHTGRSAAAIHEHANNDRTVGMGELTA
VLNGIEFKTRHNDYRLYMPHRTSQNFNAYEKVPFPDVPPQVEAKETIDEQ
IAEMREYFKAWRNQDPKHRDYKPYFKATLCYLEGAWTASAQKIDEPFASD
RHFVDAKSWMELHEKSRYIAYSGTKSRQENLSFLPTKIMGLVNDTIPNFA
QWNYRIMCHPLKRHLPTKRLRVIEDLSARMRNNKDILRHALSRSARYQLN
TQDQDTFRERPESWKTLLDELMEEIPGKDNYQVDLEDEGLDGKAMQLDGS
KLNAGYYHRWFTIGADAMGSVKQHRGYNDDYMFAALNTQEKIAGVEFNKC
VKNKGNKGKKECQMFRQKWSYAIPLEIIYMTPLYKWNPYKLKHHGDQTTA
NLKIINGNGKRNGNCAAGAAKAYTGINSRNFYMTPAAFYSGASVESSAAD
TARGVTCVLDQDGVERQVRAAGTHIFLPQIKDVGVLRTRYPIFPVHGEGS
SVWKELNAVREVTMNEEQWQKMYWKNADLDSGNEDTTLLMGESTCACAPR
HTHEIKLDAAEVQMLKGGHTLTKESTTTNAHFHSVQIRYEPDKKFFYFTS
CDAKYQCWDKHVKQFVISDS

Run BLAST on NCBI

transcript from alignment at scaffold_142:194641..201562+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00048281 ID=TCONS_00048281|Name=TCONS_00048281|organism=Clytia hemisphaerica|type=transcript|length=6922bp|location=Sequence derived from alignment at scaffold_142:194641..201562+ (Clytia hemisphaerica)
AATTCTTAATTCATCAAGAAGATTGATCAAGAAAGAAATTCAAGGTAAAT
AAattatataatatatttttttgtctaAAGTTTTACGGTAAGGTCTGTGg
gaaataactttttttaagtcATTTCGAAATATCATTAGCCGAGAAAGTTT
ATCGACTTCTCTTTCTGATAAGAGCCTGATTGATGGGAAAGTACTAATCC
ATATAATGAAATACTCAAAACTTTGCCTCTTAAATTACAGCTGATAGAAT
CATTGGGACACTCttccaaaagaaaaatcaaattatgtTTTCATATCGAT
GGGAACTCAGTAGCGTAGATAggaggaggggcgcaaaatttgtgtagggg
AGCAGATTTGTGTGGTACTGTAATGATCTTTTTACATTATAAatagataa
ttactgtgtcataaaaatctgctctcttaCAAAAAAAGTATGCACCTCTG
CTGGCTACGCTACTGGGACTAAGGACAAATGGGGGTGAAAAGCCACGCTT
TTGTATGTTTAGTTTAGGGGATACCCGTCTAGTTGTAACCTTATGTATAC
ACGGTGACATTATAGTTAGAAAGGGAACATTCATTAAACGATGCGATATA
GATTAATAGGGGAactcatagtgtcctcccccccccctttataaaaaGGG
GGGGAAATCAGTTTTCCACTTTTGAATGGGTGAGGGggggaaatgaaaat
ttgaatagtaaagggggaaaaaaaagaggggggaaaacatcgatagttgg
caaatttggtggggggaagtgtgaaatcactttaattttatctcagcaac
caaggtcagtccacatgatatcatgtgattagatcatgattgaaaattaa
ccaattttcgttctatttatgtctagtattccttttgcagctaAATTTTA
CGtctgtgtcaggttgaaatttgagaaaacatacgggtatatggggggga
aatgatattttcagaattttctggggggaaagcaaaaaagaggggggaaa
ctaaaaaactgaaaagtcatagggggaaaaaaaagaggggggagatttaa
aaaaatcaaaaatttggtggggggaacaaaccctggaggacactatggaa
CTCCGGATACCTTGATAGTAAGACCTTGAAAACTTACATAATACAAACAG
AATcttaataaaatatttcaaaatattacaaatagCAAGCCAATTATTAG
TGTGAAGATTTTGATCACAGAATTGCACAACAAGGGACAGTATTCGAAAC
CCCAGCAATTCCAGCAAAGGGTGTCATGGAACGTATGACGATAGACTCTC
TTCCTTCACTGACGCTCTGATTAGGcgtgattttgaatgtccggagtgtc
aactgatgcttgtacGGGGGTGAGATCTGTTGTCCCaggggtcaaaattc
acaatgttcgAGGGGTAAATTTCcgaaaaatgttatatcctcaaCCCGGG
GAGGGGGTggtttctggaagagcccattactCAAATGGctcaaatatttg
aaaattcaatcaaactttttacaTTATCAGATGAAGCTGTTTTTCCTCGT
GCTTTCCTTATTGGTGGTCGAACAAAGATGTCAAGTATCCGAACAACAAT
TCCAATCCGTCAAATCAACATTGGCTGCACTGTCACGTCAAGTTATGCTC
CaacaatttttcactgaaacaCGTGTCCGTACTGAAGGTCAATCAGGTTT
AAAAGTCAACCGACAACGAAGCAATGGTTTAAAAAACTACCATATCAACA
CCCATACTGGTAGATCCGCAGCTGCAATTCACGAGCATGCTAATAATGAC
CGTACTGTAGGAATGGGAGAACTTACAGCTGTCCTTAATGGGATTGAATT
TAAGACAAGACACAACGATTACCGATTGTACATGCCTCACCGAACATCTC
AAAACTTCAATGCGTACGAGAAAGTACCATTCCCTGATGTAAGAATATAA
ATGTTTCTTTATCttaatattgaaaatttaattttagacCCGCGGAAATG
TATAATTTTGCTACGTTTCTGTTTATCCtctacccagctgacacacaacg
ttgtttcaacgtttatttaacgttcacaatgtccatataacgttagataa
acgttgaaataacgttgtgtcaGCTGGGtgcgaaaagagtttcttacAGA
GGAAGTATATATCTAAAGAGTTCTGCAATTCAGACTATAGATTTGCATGC
TGTCAAGTCATGTATTTTTCTCTGTTGTTGAATTAAATTTTCAGAAGTTC
CAGAGTGTTCTCAAAGTCAAGAAAAAAATGCTTTCCTCTCGAAAGCATAG
ATCTTCAATTACACtctttataaaatgtttttaatgcCTCTTACAGTATT
CTTCATCAGTTTGAATTTATCATGATGTTATTTTCCAGGTACCACCACAA
GTCGAAGCTAAAGAAACCATCGATGAACAAATCGCCGAAATGAGAGAATA
CTTCAAAGCTTGGAGAAATCAAGATCCAAAACACCGCGACTATAAACCAT
ACTTCAAAGCTACGTTGTGCTACTTAGAAGGTGCCTGGACTGCATCAGCA
CAAAAAATTGACGAGCCTTTTGCATCTGATCGTCATTTTGTAGATGCAAA
ATCATGGATGGAACTTCACGAGAAATCAAGATATATTGCTTACTCTGGAA
CCAAATCGCGACAAGAGAATCTCTCGTTCTTACCAACCAAAATTATGGGT
TTAGTCAACGATACAATCCCTAACTTTGCCCAATGGAATTATCGTATCAT
GTGTCATCCACTGAAACGTCACTTGCCAACCAAACGATTGAGAGTTATAG
AAGATTTATCAGCTCGCATGAGGAACAACAAAGACATCCTGAGACACGCT
CTCTCACGATCTGCGCGTTACCAACTCAACACTCAAGATCAAGATACTTT
CAGAGAAAGACCAGAAAGCTGGAAAACTCTCCTTGATGAACTCATGGAAG
AAATCCCTGGCAAAGATAATTATCAAGGTACAACATTATCATtattaatt
tgtcataattccATAACTCATAAAAACAttccaagctggcacacaacgtt
ttttcaacgtttatctaatgttcacaacgtccaaataacgttagattaac
gttgaaacaacgttgtgtaccaagTGGGTTAGCGTCTCgtacaaaataat
gaaaaagttCGGGCAGTGATTTGCACACGAAAGTTCCCTTATCTCCAAAA
CTAAAACTAGTACTCTTTGGCTAATGGTGGATTTGTCgataaaaattgac
tttcatctTTTCtcatccttttatttcatttcaaCCGGCACAAAGCTGTT
TTTTAATGTCCATCTAACGTTTATGACAGTCTCTATAAGATTACATTATT
GTCGATACGCAGTGTGCCGGGATTCAggtcaaaataaaattaacaacTTT
AAAAGCTTATACCCTGTCTCAATTTTCTgagtaaaaatatatatatatct
tttcattttcagttgatTTGGAGGATGAAGGTTTAGATGGTAAAGCAATG
CAATTGGATGGAAGTAAACTCAATGCTGGTTATTATCACAGATGGTTCAC
TATTGGTGCAGATGCTATGGGATCGGTCAAACAACATCGTGGTTACAATG
ATGACTACATGTTTGCTGCTCTCAATACACAAGAGAAGATTGCCGGCGTT
GAATTCaacaaatgtgtcaaaaataagGGAAATAAGGGAAAAAAGGAATG
CCAAATGTTCAGACAAAAATGGTCATATGCAATCCCATTGGAGATCATCT
ACATGACACCGTTGTATAAATGGAATCCTTACAAATTGAAGCACCATGGT
GACCAAACAACTGCTAATCTGAAAATCATCAATGGCAACGGCAAACGAAA
TGGTAATTGCGCAGCAGGCGCTGCCAAGGCTTATACTGGCATCAACAGCC
GTAATTTCTACATGACACCTGCAGCATTCTACTCTGGTGCTTCTGTGGAG
AGCAGTGCAGCTGATACAGCACGTGGTGTTACGTGTGTATTGGATCAAGA
TGGCGTCGAAAGACAAGTCAGAGCCGCTGGAACACACATTTTCCTACCAC
AAATCAAAGATGTTGGTGTTTTGAGAACCAGATATCCAATCTTTCCAGTT
CACGGTGAAGGATCATCTGTATGGAAAGAATTGAACGCTGTCAGAGAAGT
CACCATGAATGAAGAACAATGGCAAAAGATGTACTGGAAAAATNtccttt
tatttcatttcaaCCGGCACAAAGCTGTTTTTTAATGTCCATCTAACGTT
TATGACAGTCTCTATAAGATTACATTATTGTCGATACGCAGTGTGCCGGG
ATTCAggtcaaaataaaattaacaacTTTAAAAGCTTATACCCTGTCTCA
ATTTTCTgagtaaaaatatatatatatcttttcattttcagttgatTTGG
AGGATGAAGGTTTAGATGGTAAAGCAATGCAATTGGATGGAAGTAAACTC
AATGCTGGTTATTATCACAGATGGTTCACTATTGGTGCAGATGCTATGGG
ATCGGTCAAACAACATCGTGGTTACAATGATGACTACATGTTTGCTGCTC
TCAATACACAAGAGAAGATTGCCGGCGTTGAATTCaacaaatgtgtcaaa
aataagGGAAATAAGGGAAAAAAGGAATGCCAAATGTTCAGACAAAAATG
GTCATATGCAATCCCATTGGAGATCATCTACATGACACCGTTGTATAAAT
GGAATCCTTACAAATTGAAGCACCATGGTGACCAAACAACTGCTAATCTG
AAAATCATCAATGGCAACGGCAAACGAAATGGTAATTGCGCAGCAGGCGC
TGCCAAGGCTTATACTGGCATCAACAGCCGTAATTTCTACATGACACCTG
CAGCATTCTACTCTGGTGCTTCTGTGGAGAGCAGTGCAGCTGATACAGCA
CGTGGTGTTACGTGTGTATTGGATCAAGATGGCGTCGAAAGACAAGTCAG
AGCCGCTGGAACACACATTTTCCTACCACAAATCAAAGATGTTGGTGTTT
TGAGAACCAGATATCCAATCTTTCCAGTTCACGGTGAAGGATCATCTGTA
TGGAAAGAATTGAACGCTGTCAGAGAAGTCACCATGAATGAAGAACAATG
GCAAAAGATGTACTGGAAAAATGCTGACCTCGACTCCGGTAATGAAGACA
CAACACTGTTGATGGGAGAATCAACCTGCGCATGCGCACCACGACACACC
CATGAAATCAAATTGGACGCAGCTGAAGTACAAATGTTGAAAGGTGGCCA
TACTTTGACCAAGGAGTCTACCACAACTAATGCTCATTTCCATTCAGTAC
AAATTCGATATGAGCCggacaagaaatttttctatttcacTTCCTGTGAC
GCCAAATATCAATGCTGGGATAAACACGTCAAACAATTTGTTATCTCAGA
TAGttaaatacaatttttaatACTTGTGAAGTAGAATGTGTTAGAACACA
CCCATATTTTATTAATACACCCTTCACTAGATTCATTTATAACGTAAATA
TATAATACGCATGAGCATACatgaaaatgatttgaaattcTTTAACTAAA
AATACCCCTCTGAAATCTTTGTTAGTCATTCTGACATGTATAATTGTTAG
GTACAGTAAACTCACGCTTATATGAGCTTCTTTTTACGAATCTTTCTTAT
AATTTGAACTTTTTCTCATTTCCTTTCTGTGAGAAACCTTCTCTTAAAAt
aatactctctataattcgaatgtctTTGTAATTGTAACAAATTAGATTCC
cagttcgagttcgaattagcgaaagtCAACTGTATCACAAGTATAAATTG
CCAACAACAACCAAAGAGCTCTCTGAAAATTACCGTCAGCTTCTATATCT
CTATGTTTTCATCATGGTAATTATAGGAAATGTCTAAATGCAGTGTTTCT
CAACCAACCATGTTCTCCGAACGGGTTTTCTTCTTCTAATAAAGATCACG
TGTATGATCACGTGTTTTTCATATccttaaaattcatgaaaatgacTCTT
CTCAATGTCCCACGGGCTATCAGTTATTCTCGCCATTCTACTAGACATTC
GAACAAGAAATCTTTACAGGTACCTTTATAGGTTCAAATGGAGCGCTTCa
attctattttttctttttcaacaaaatggcagctttttcaggattttctt
cAAGTTCATGCATCGTTTTCATGTCACGTTTAGCGATCAGATTTCGACTT
CGTTTTATTCTTCTTTGTAGAAGTTCATTATATAAATCCCACCAAGACGC
CTTATCAGTATGATTTGTCACTGATTTGATAGCCTTTCCAGTTGTAGCAC
CATGAGGCACTAAAGTCTTTTTAGTTAAAGGTACGCGTACCGTAAAACGA
ACCAGCTTCGGTTTATCAGCACAATAATCACGAACATAAATGACTTCATT
TTCGTCTAATTGCCAATTATAAATCACAAACTCATCTAAAAATCCTCGGA
AAGTCTCGTCACCCACACTTGCTTCGTTATCCCAATTTGTCGGTAAATCT
TCTCGTTTGTCGGGACTTGCTATTTTCTCGAGTTTCAAAATACCGTTAAC
GAAGATTTTGCCGACtccattttcattattataGGTGGCCGTCAAGTGTG
TCCATAAGCCCTCTGgcactaaaattttattttgagacCACATGTCAATT
ATTTCAGGAACACTCTCAATATCGGTACCAATGGCAAACCGTACACCGCC
ATCGATGACTTGTAATCGGTATCCAATATTTCCTTTATCACTTTCAGTAG
TGAAAATATTATGAACACCACGTGTGCTGTTTAACATCACCCAGACCGTG
ATTGAGATTTTGGATGTGGGTAAACCACGTACTGGGACACGCTGAATATC
GAGTTGAGGGTCCGGACCTTGAGTCAAATCCAAACAATAACCACATTTGC
CGCAATCTTCTTTCTGTTTCGC

Coding sequence (CDS) from alignment at scaffold_142:194641..201562+

>TCONS_00048281 ID=TCONS_00048281|Name=TCONS_00048281|organism=Clytia hemisphaerica|type=CDS|length=8052bp|location=Sequence derived from alignment at scaffold_142:194641..201562+ (Clytia hemisphaerica)
ATGAAGCTGTTTTTCCTCGTGCTTTCCTTATTGGTGGTCGAACAAAGATG
TCAAGTATCCGAACAACAATTCCAATCCGTCAAATCAACATTGGCTGCAC
TGTCACGTCAAGTTATGCTCCaacaatttttcactgaaacaCGTGTCCGT
ACTGAAGGTCAATCAGGTTTAAAAGTCAACCGACAACGAAGCAATGGTTT
AAAAAACTACCATATCAACACCCATACTGGTAGATCCGCAGCTGCAATTC
ACGAGCATGCTAATAATGACCGTACTGTAGGAATGGGAGAACTTACAGCT
GTCCTTAATGGGATTGAATTTAAGACAAGACACAACGATTACCGATTGTA
CATGCCTCACCGAACATCTCAAAACTTCAATGCGTACGAGAAAGTACCAT
TCCCTGATGTACCACCACAAGTCGAAGCTAAAGAAACCATCGATGAACAA
ATCGCCGAAATGAGAGAATACTTCAAAGCTTGGAGAAATCAAGATCCAAA
ACACCGCGACTATAAACCATACTTCAAAGCTACGTTGTGCTACTTAGAAG
GTGCCTGGACTGCATCAGCACAAAAAATTGACGAGCCTTTTGCATCTGAT
CGTCATTTTGTAGATGCAAAATCATGGATGGAACTTCACGAGAAATCAAG
ATATATTGCTTACTCTGGAACCAAATCGCGACAAGAGAATCTCTCGTTCT
TACCAACCAAAATTATGGGTTTAGTCAACGATACAATCCCTAACTTTGCC
CAATGGAATTATCGTATCATGTGTCATCCACTGAAACGTCACTTGCCAAC
CAAACGATTGAGAGTTATAGAAGATTTATCAGCTCGCATGAGGAACAACA
AAGACATCCTGAGACACGCTCTCTCACGATCTGCGCGTTACCAACTCAAC
ACTCAAGATCAAGATACTTTCAGAGAAAGACCAGAAAGCTGGAAAACTCT
CCTTGATGAACTCATGGAAGAAATCCCTGGCAAAGATAATTATCAAGttg
atTTGGAGGATGAAGGTTTAGATGGTAAAGCAATGCAATTGGATGGAAGT
AAACTCAATGCTGGTTATTATCACAGATGGTTCACTATTGGTGCAGATGC
TATGGGATCGGTCAAACAACATCGTGGTTACAATGATGACTACATGTTTG
CTGCTCTCAATACACAAGAGAAGATTGCCGGCGTTGAATTCaacaaatgt
gtcaaaaataagGGAAATAAGGGAAAAAAGGAATGCCAAATGTTCAGACA
AAAATGGTCATATGCAATCCCATTGGAGATCATCTACATGACACCGTTGT
ATAAATGGAATCCTTACAAATTGAAGCACCATGGTGACCAAACAACTGCT
AATCTGAAAATCATCAATGGCAACGGCAAACGAAATGGTAATTGCGCAGC
AGGCGCTGCCAAGGCTTATACTGGCATCAACAGCCGTAATTTCTACATGA
CACCTGCAGCATTCTACTCTGGTGCTTCTGTGGAGAGCAGTGCAGCTGAT
ACAGCACGTGGTGTTACGTGTGTATTGGATCAAGATGGCGTCGAAAGACA
AGTCAGAGCCGCTGGAACACACATTTTCCTACCACAAATCAAAGATGTTG
GTGTTTTGAGAACCAGATATCCAATCTTTCCAGTTCACGGTGAAGGATCA
TCTGTATGGAAAGAATTGAACGCTGTCAGAGAAGTCACCATGAATGAAGA
ACAATGGCAAAAGATGTACTGGAAAAATGCTGACCTCGACTCCGGTAATG
AAGACACAACACTGTTGATGGGAGAATCAACCTGCGCATGCGCACCACGA
CACACCCATGAAATCAAATTGGACGCAGCTGAAGTACAAATGTTGAAAGG
TGGCCATACTTTGACCAAGGAGTCTACCACAACTAATGCTCATTTCCATT
CAGTACAAATTCGATATGAGCCggacaagaaatttttctatttcacTTCC
TGTGACGCCAAATATCAATGCTGGGATAAACACGTCAAACAATTTGTTAT
CTCAGATAGttaaATGAAGCTGTTTTTCCTCGTGCTTTCCTTATTGGTGG
TCGAACAAAGATGTCAAGTATCCGAACAACAATTCCAATCCGTCAAATCA
ACATTGGCTGCACTGTCACGTCAAGTTATGCTCCaacaatttttcactga
aacaCGTGTCCGTACTGAAGGTCAATCAGGTTTAAAAGTCAACCGACAAC
GAAGCAATGGTTTAAAAAACTACCATATCAACACCCATACTGGTAGATCC
GCAGCTGCAATTCACGAGCATGCTAATAATGACCGTACTGTAGGAATGGG
AGAACTTACAGCTGTCCTTAATGGGATTGAATTTAAGACAAGACACAACG
ATTACCGATTGTACATGCCTCACCGAACATCTCAAAACTTCAATGCGTAC
GAGAAAGTACCATTCCCTGATGTACCACCACAAGTCGAAGCTAAAGAAAC
CATCGATGAACAAATCGCCGAAATGAGAGAATACTTCAAAGCTTGGAGAA
ATCAAGATCCAAAACACCGCGACTATAAACCATACTTCAAAGCTACGTTG
TGCTACTTAGAAGGTGCCTGGACTGCATCAGCACAAAAAATTGACGAGCC
TTTTGCATCTGATCGTCATTTTGTAGATGCAAAATCATGGATGGAACTTC
ACGAGAAATCAAGATATATTGCTTACTCTGGAACCAAATCGCGACAAGAG
AATCTCTCGTTCTTACCAACCAAAATTATGGGTTTAGTCAACGATACAAT
CCCTAACTTTGCCCAATGGAATTATCGTATCATGTGTCATCCACTGAAAC
GTCACTTGCCAACCAAACGATTGAGAGTTATAGAAGATTTATCAGCTCGC
ATGAGGAACAACAAAGACATCCTGAGACACGCTCTCTCACGATCTGCGCG
TTACCAACTCAACACTCAAGATCAAGATACTTTCAGAGAAAGACCAGAAA
GCTGGAAAACTCTCCTTGATGAACTCATGGAAGAAATCCCTGGCAAAGAT
AATTATCAAGttgatTTGGAGGATGAAGGTTTAGATGGTAAAGCAATGCA
ATTGGATGGAAGTAAACTCAATGCTGGTTATTATCACAGATGGTTCACTA
TTGGTGCAGATGCTATGGGATCGGTCAAACAACATCGTGGTTACAATGAT
GACTACATGTTTGCTGCTCTCAATACACAAGAGAAGATTGCCGGCGTTGA
ATTCaacaaatgtgtcaaaaataagGGAAATAAGGGAAAAAAGGAATGCC
AAATGTTCAGACAAAAATGGTCATATGCAATCCCATTGGAGATCATCTAC
ATGACACCGTTGTATAAATGGAATCCTTACAAATTGAAGCACCATGGTGA
CCAAACAACTGCTAATCTGAAAATCATCAATGGCAACGGCAAACGAAATG
GTAATTGCGCAGCAGGCGCTGCCAAGGCTTATACTGGCATCAACAGCCGT
AATTTCTACATGACACCTGCAGCATTCTACTCTGGTGCTTCTGTGGAGAG
CAGTGCAGCTGATACAGCACGTGGTGTTACGTGTGTATTGGATCAAGATG
GCGTCGAAAGACAAGTCAGAGCCGCTGGAACACACATTTTCCTACCACAA
ATCAAAGATGTTGGTGTTTTGAGAACCAGATATCCAATCTTTCCAGTTCA
CGGTGAAGGATCATCTGTATGGAAAGAATTGAACGCTGTCAGAGAAGTCA
CCATGAATGAAGAACAATGGCAAAAGATGTACTGGAAAAATGCTGACCTC
GACTCCGGTAATGAAGACACAACACTGTTGATGGGAGAATCAACCTGCGC
ATGCGCACCACGACACACCCATGAAATCAAATTGGACGCAGCTGAAGTAC
AAATGTTGAAAGGTGGCCATACTTTGACCAAGGAGTCTACCACAACTAAT
GCTCATTTCCATTCAGTACAAATTCGATATGAGCCggacaagaaattttt
ctatttcacTTCCTGTGACGCCAAATATCAATGCTGGGATAAACACGTCA
AACAATTTGTTATCTCAGATAGttaaATGAAGCTGTTTTTCCTCGTGCTT
TCCTTATTGGTGGTCGAACAAAGATGTCAAGTATCCGAACAACAATTCCA
ATCCGTCAAATCAACATTGGCTGCACTGTCACGTCAAGTTATGCTCCaac
aatttttcactgaaacaCGTGTCCGTACTGAAGGTCAATCAGGTTTAAAA
GTCAACCGACAACGAAGCAATGGTTTAAAAAACTACCATATCAACACCCA
TACTGGTAGATCCGCAGCTGCAATTCACGAGCATGCTAATAATGACCGTA
CTGTAGGAATGGGAGAACTTACAGCTGTCCTTAATGGGATTGAATTTAAG
ACAAGACACAACGATTACCGATTGTACATGCCTCACCGAACATCTCAAAA
CTTCAATGCGTACGAGAAAGTACCATTCCCTGATGTACCACCACAAGTCG
AAGCTAAAGAAACCATCGATGAACAAATCGCCGAAATGAGAGAATACTTC
AAAGCTTGGAGAAATCAAGATCCAAAACACCGCGACTATAAACCATACTT
CAAAGCTACGTTGTGCTACTTAGAAGGTGCCTGGACTGCATCAGCACAAA
AAATTGACGAGCCTTTTGCATCTGATCGTCATTTTGTAGATGCAAAATCA
TGGATGGAACTTCACGAGAAATCAAGATATATTGCTTACTCTGGAACCAA
ATCGCGACAAGAGAATCTCTCGTTCTTACCAACCAAAATTATGGGTTTAG
TCAACGATACAATCCCTAACTTTGCCCAATGGAATTATCGTATCATGTGT
CATCCACTGAAACGTCACTTGCCAACCAAACGATTGAGAGTTATAGAAGA
TTTATCAGCTCGCATGAGGAACAACAAAGACATCCTGAGACACGCTCTCT
CACGATCTGCGCGTTACCAACTCAACACTCAAGATCAAGATACTTTCAGA
GAAAGACCAGAAAGCTGGAAAACTCTCCTTGATGAACTCATGGAAGAAAT
CCCTGGCAAAGATAATTATCAAGttgatTTGGAGGATGAAGGTTTAGATG
GTAAAGCAATGCAATTGGATGGAAGTAAACTCAATGCTGGTTATTATCAC
AGATGGTTCACTATTGGTGCAGATGCTATGGGATCGGTCAAACAACATCG
TGGTTACAATGATGACTACATGTTTGCTGCTCTCAATACACAAGAGAAGA
TTGCCGGCGTTGAATTCaacaaatgtgtcaaaaataagGGAAATAAGGGA
AAAAAGGAATGCCAAATGTTCAGACAAAAATGGTCATATGCAATCCCATT
GGAGATCATCTACATGACACCGTTGTATAAATGGAATCCTTACAAATTGA
AGCACCATGGTGACCAAACAACTGCTAATCTGAAAATCATCAATGGCAAC
GGCAAACGAAATGGTAATTGCGCAGCAGGCGCTGCCAAGGCTTATACTGG
CATCAACAGCCGTAATTTCTACATGACACCTGCAGCATTCTACTCTGGTG
CTTCTGTGGAGAGCAGTGCAGCTGATACAGCACGTGGTGTTACGTGTGTA
TTGGATCAAGATGGCGTCGAAAGACAAGTCAGAGCCGCTGGAACACACAT
TTTCCTACCACAAATCAAAGATGTTGGTGTTTTGAGAACCAGATATCCAA
TCTTTCCAGTTCACGGTGAAGGATCATCTGTATGGAAAGAATTGAACGCT
GTCAGAGAAGTCACCATGAATGAAGAACAATGGCAAAAGATGTACTGGAA
AAATGCTGACCTCGACTCCGGTAATGAAGACACAACACTGTTGATGGGAG
AATCAACCTGCGCATGCGCACCACGACACACCCATGAAATCAAATTGGAC
GCAGCTGAAGTACAAATGTTGAAAGGTGGCCATACTTTGACCAAGGAGTC
TACCACAACTAATGCTCATTTCCATTCAGTACAAATTCGATATGAGCCgg
acaagaaatttttctatttcacTTCCTGTGACGCCAAATATCAATGCTGG
GATAAACACGTCAAACAATTTGTTATCTCAGATAGttaaATGAAGCTGTT
TTTCCTCGTGCTTTCCTTATTGGTGGTCGAACAAAGATGTCAAGTATCCG
AACAACAATTCCAATCCGTCAAATCAACATTGGCTGCACTGTCACGTCAA
GTTATGCTCCaacaatttttcactgaaacaCGTGTCCGTACTGAAGGTCA
ATCAGGTTTAAAAGTCAACCGACAACGAAGCAATGGTTTAAAAAACTACC
ATATCAACACCCATACTGGTAGATCCGCAGCTGCAATTCACGAGCATGCT
AATAATGACCGTACTGTAGGAATGGGAGAACTTACAGCTGTCCTTAATGG
GATTGAATTTAAGACAAGACACAACGATTACCGATTGTACATGCCTCACC
GAACATCTCAAAACTTCAATGCGTACGAGAAAGTACCATTCCCTGATGTA
CCACCACAAGTCGAAGCTAAAGAAACCATCGATGAACAAATCGCCGAAAT
GAGAGAATACTTCAAAGCTTGGAGAAATCAAGATCCAAAACACCGCGACT
ATAAACCATACTTCAAAGCTACGTTGTGCTACTTAGAAGGTGCCTGGACT
GCATCAGCACAAAAAATTGACGAGCCTTTTGCATCTGATCGTCATTTTGT
AGATGCAAAATCATGGATGGAACTTCACGAGAAATCAAGATATATTGCTT
ACTCTGGAACCAAATCGCGACAAGAGAATCTCTCGTTCTTACCAACCAAA
ATTATGGGTTTAGTCAACGATACAATCCCTAACTTTGCCCAATGGAATTA
TCGTATCATGTGTCATCCACTGAAACGTCACTTGCCAACCAAACGATTGA
GAGTTATAGAAGATTTATCAGCTCGCATGAGGAACAACAAAGACATCCTG
AGACACGCTCTCTCACGATCTGCGCGTTACCAACTCAACACTCAAGATCA
AGATACTTTCAGAGAAAGACCAGAAAGCTGGAAAACTCTCCTTGATGAAC
TCATGGAAGAAATCCCTGGCAAAGATAATTATCAAGttgatTTGGAGGAT
GAAGGTTTAGATGGTAAAGCAATGCAATTGGATGGAAGTAAACTCAATGC
TGGTTATTATCACAGATGGTTCACTATTGGTGCAGATGCTATGGGATCGG
TCAAACAACATCGTGGTTACAATGATGACTACATGTTTGCTGCTCTCAAT
ACACAAGAGAAGATTGCCGGCGTTGAATTCaacaaatgtgtcaaaaataa
gGGAAATAAGGGAAAAAAGGAATGCCAAATGTTCAGACAAAAATGGTCAT
ATGCAATCCCATTGGAGATCATCTACATGACACCGTTGTATAAATGGAAT
CCTTACAAATTGAAGCACCATGGTGACCAAACAACTGCTAATCTGAAAAT
CATCAATGGCAACGGCAAACGAAATGGTAATTGCGCAGCAGGCGCTGCCA
AGGCTTATACTGGCATCAACAGCCGTAATTTCTACATGACACCTGCAGCA
TTCTACTCTGGTGCTTCTGTGGAGAGCAGTGCAGCTGATACAGCACGTGG
TGTTACGTGTGTATTGGATCAAGATGGCGTCGAAAGACAAGTCAGAGCCG
CTGGAACACACATTTTCCTACCACAAATCAAAGATGTTGGTGTTTTGAGA
ACCAGATATCCAATCTTTCCAGTTCACGGTGAAGGATCATCTGTATGGAA
AGAATTGAACGCTGTCAGAGAAGTCACCATGAATGAAGAACAATGGCAAA
AGATGTACTGGAAAAATGCTGACCTCGACTCCGGTAATGAAGACACAACA
CTGTTGATGGGAGAATCAACCTGCGCATGCGCACCACGACACACCCATGA
AATCAAATTGGACGCAGCTGAAGTACAAATGTTGAAAGGTGGCCATACTT
TGACCAAGGAGTCTACCACAACTAATGCTCATTTCCATTCAGTACAAATT
CGATATGAGCCggacaagaaatttttctatttcacTTCCTGTGACGCCAA
ATATCAATGCTGGGATAAACACGTCAAACAATTTGTTATCTCAGATAGtt
aa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030728	XLOC_030728	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00048281-protein	TCONS_00048281-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_142	supercontig	scaffold_142:194641..201562 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0358965	0	0	0	0.0693515	0	0	0	0	0	0	0	48.4104	41.4477	0.0830922	0.119542	0.155844	0	93.3533	84.6766	2.97153	5.03132	0.273391	1.11259	1.1954e-05	0	0	0.0324408	0.0425028	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00048281 vs. Swiss-Prot (Human)

BLAST of TCONS_00048281 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00048281 (transcript) - C. hemisphaerica