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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048969 ID=TCONS_00048969|Name=TCONS_00048969|organism=Clytia hemisphaerica|type=transcript|length=413bp
tagaaaaaaaattaaacactGAAATAAAGAGATGAAGATCTGAAAGAAAC
AATACACAATGACTCATGGAACGTTGTGGATACCATTATGCACATTATGC
GTGTTGTTATTGGTGACAGGTGTACACTCTGATGATGAACTGATCATGTC
CAATCTGGTATACAGACACGGTGCGCGTTCACCGATAGCAGTTTATCCTA
CAGACCCTTATAAACATCATTGGAAAGATGGTATCGGTGGCCGACTTACC
CAGAGAGGCATGCAAATGGAATATGATTtgggaaagtttttgaaaacacg
ATACGTGGACACCAAATTTGTTAGTCCTCAATATTTACATACACAGGTGA
CAATCAGGAGTTCCGGAGTCGACCGATGTCTTCAAAGTGCAGAAGCACAA
CTTGCTGGTCTAT Run BLAST on NCBI transcript from alignment at scaffold_15:32099..47004+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048969 ID=TCONS_00048969|Name=TCONS_00048969|organism=Clytia hemisphaerica|type=transcript|length=14906bp|location=Sequence derived from alignment at scaffold_15:32099..47004+ (Clytia hemisphaerica)
tagaaaaaaaattaaacactGAAATAAAGAGATGAAGATCTGAAAGAAAC
AATACACAATGACTCATGGAACGTTGTGGATACCATTATGCACATTATGC
GTGTTGTTATTGGTGACAGGTGTACACTCTGATGATGAACTGATCATGTC
CAATCTGGTAAGTCTCATTTTCTTTTGCAATTCttatgaatttcttttct
tttccgtTAAGTTTAAAGGATCAGTCAAATGGTTTGAGGTCTTTGGCATG
TAGATTCCACTTCGTAGTCCTGATGAGCAAAACCttcgattatttttttt
taaggaGACCTAGTCGCAAAAAGTTGAGGATAACAGGGGTATATTAAATA
TAAGGCtataataatataaatttttttttaacctaCAACACGCCTTTTTA
ACTAAAGGCTTGATTCTGGTAAaacttaagaacaatttaaacgATCACAG
CCTAAGATTTAGATTTAGAAGTTTTTAAGAaagcatgttaagaacattgc
gataaaaaataagaacacctGAGCCTCAGCccaaatttactggttcttta
ATAAAAAAAGGCGTAtagacgtttttttataagaacatccaaaattgttg
aagccttcggatgttcttaactttttgagttttaagcctaaaaatgttct
taacatgttgttATTCTCACcgttttctgactttttttgtccatttttcc
aagaaatcgggtgttttagagtctgcgaagccttgaaatgttctaaactt
gttcttagtattttggccatcgaagcctcgtgttcttatatagtttgttc
ttataaagaaatgtaTACTTTTTTTCCACCACTCAGTTATACCGACATGG
AGCACGTTCACCACAATTTATTTATCCTACCGATCCTCATAAAGATTATT
GGAAAGATGGTGTTGGCCGACTCACCCAGGTATCTTTTATTTGTTTAATT
CAATGTCGTACAAATTGCACCAAACTTTAGATTGAGGACTGGGGTGTAAT
AACCATAGCAATTTTCCATAAAAAGGGTGGCTGCTTCGTTCTGAACTTTA
ATTAAACGAGCTCATACACTTAACCCTATAATTATTATCATGCTTCTTGG
GGGCTTTGCTTATCATCATACCACCATCCATAACTTTTTATATCTAGGTG
TTGTGAACTTTAACTTAACAATTGACACATGATATGATGATGAGTCATAG
ATGAACAATTCCATTTACTCCATTTAGAAACTCTTTTTGGTACATGGGTA
CTTTGAAGCCTACTGAAGCCAGATATATGGTTATTCATAGTTTTCTGGGT
GGTTCAAAACCCCCTATATAATCACCCCCCCCCAAAGGCAAAAACCCCCC
TATATATAGATTTCTTAATTTCTCCCTCCCCCCTTAATAACCGAGgttaa
aagaaataaatttatttGGGTTAAACACTTTGAATCCCCCATATATAACC
AAATCCCCCATTAAAGGCCAAACCCCCTATTAATTGAGGCTTTTTCGAAC
CCTGTCTGAGAATTtgaagcgggggggggggctatgtTATTTTCCCCTTA
ATGTTCTGATATCACAGGTTACAGCCTCTGGAAGGTAGCTCGTATAGTGA
TATAGTGTTTCTTCTTTTGCTTTGTAGAAAGgtatgaaaatggaatatga
tTTGGGAAAGTTTTTGAAAGCACGGTATGTGGATACCAAATTTGTTAGTC
AACACTATCTTCACACACAGGTGAGTGGGCTAAATATTTGAGCAGATTAA
TATTAATATGTCTAAATAGGTAATAAAATAAAGCCAGAACTCGTGTTAGC
GTGTTAGCAATTACGCCCAGCAACGGTCGATTTTAGGGGAGGCTAAAAGG
TTCCTTTGATCGCCAGTTTCGCTGAACGGAACATTAGAATGAGCGGGAAT
TCGAAGTGGGAACTCCCCTGTCTTTGTATCGTTGATGCATCTTTAATTCT
TATCTCATTAATCTCAAATTGCTTTTGATTTTAAAGGTGACAATCAGGAG
TTCCGGAGTCGACCGATGTCTTCAAAGTGCAGAAGCACAACTTGCTGCGC
TCTATCCACCCTCTGACTGGCAGGTAAAAGAATTGtaataagctttttct
gagaGTAAGATTTCCCAGAAATTTGCACAGACAAAAGATTTACATGAAAG
TGACTTCGAGAATTCTAGTTTTATTGATTTCGATGTCTCGGCGCTATTCC
TCTGCATGGATCACCGTCTCTGTGACTTTAGACAACTGAGTAAATTGGAT
CATTTTTGGAAAACCTTACCACTGGGGTGTGTGTATATagagaaataata
aaaaaacgttattatcacagatatcttatatctgaagaaaaataatgcgc
cattatttttaaaagaagacCACAGTTCGGTGCTGACAATTTGTTCAGTC
AAGACATTATTCTCCTCGCTTCTCGTCATAAAAGTTGTTTGTTTTGAACG
AAGAATTGCCGGTACCGAAAGCTTTTGTCAACTAATTtttgcattatttt
gcttcgaCTGCCGTGGCTTTGAAAGATAGAGAAGCTGTATCTAGTATTTT
ACTTAAGATTCTGTGTTTTTGTTCACACTTCTATCATCTTAACTTTTAGA
TATGGGGAGATGACGAGCTTGGTAAACTATGGCAACCAATTCCCATTCAA
ACTGTCCCTGATGATAAAGACCCTGTAAGCTTTAAATGCGTTTTTACATT
CTCTGGAAAAAAGCGAAACAGAGTCAGTAGTACCAGACTATCATTGGCCG
TTACATGAATTCTGCAACCATTTTCCAAATATCTTGTTTTGTAACTTACT
GACCAGCCANATCATTGGCCGTTACATGAATTCTGCAACCATTTTCCAAA
TATCTCGTTTTGTAACTTACTGACCAGCCAAATTATtaagttcacttaag
cgacacctgatctgaaaatgtttcaaaatgtaATTACATTAATTACGAGG
GAGGAGAAGGTTGAAATATCCTAGGCCtgagtggaaaattttagcttctt
ttgCGAAAGTTAGtgtgtttaaaaaatattatgctcgtaaaaaattcttt
aaaattttaccGATTCGCGAATGTGTGGTAAATTCCGCCCTTTTCAACAT
CCTGCGTGCTCGCAAAATCTGAGGAACATACTGGGAGGACAAATAATGAG
GATAACAACACTCACACGAATTAGTGAAgttgattgttttttatttcaaa
aactttatattttcctGGTTCACTCTACTCTGGTTATTGAACATAGAACG
ACATTTCTACGTTTTCAAGTCTTGAAATAAATTTATCCAATTTTTATTGT
TAGGTACTTCGCCCAGAGAGCACAAAGAATTGTCCAAGGTATCCCCAATT
GATTGCTGAAATGAAAAGTAATTCTGACGagtatcaaaagaaaattaaag
agaGCCAAGTGAGTAAAGTAAACTTTTAAAGGGGTAATCAGATGGGCTGA
GATATTTAACGCAGGCTCATTCATTGAATTTTCCTGAgtaaaatctcaat
tttttttttgtctaatTATTTTCTAACTAGCCTAGATATTCCGGTTAAAA
GTTACTTTTAGCGAGAAAACAAATAGCAAACTAACATAAGAACCGTGTAG
TAActtgattttaaatattttaaatgaccttatcggcccttattggtgtt
tttttttgtcactAAGCAATCGGAATTAAATTAGGGGGCCGGCGCTAAAt
cagggccggcgttaaaagNGTCACTAAGCAATCGGAATTAAATTAGGGGG
GGCGGCGCTAAATCAGGACCGGCGTTAAAAAGGCTGATAAGCTGTGATAA
GGTATCATATCTCAACTTTGAATGAAGGTTTTACTCAAGAATCTAAATGT
TAATCTCAAactatctgattatccctttaaagaaagaaataacaAGCTCT
TCTCGATCTTGATTCGACTATTTGGCAgagataaaaaaagttttttctat
gGGTTGAAAGATTTAAACATTTGAACCTCCAGTTTGCAGGCACCATTGGG
GGAAGATGGCAAGTGACTGCTAAATATGAAACTTCATATATGATTATATT
TTGCAGGACTTATTGAAGTATATGAGTTTGCACAGCGGAACTAAAGTCAC
GATGGACAACATGTGGATGATTTATGATAATTTCAAAAGCGGGGTAAATT
TCACCTATTTTTTCAAGTCGCTGGTCGTATGCTTTAAAGGGAAcagcaaa
tttttcattttctgattCTTGTTCTGAGTGGTTTTGACTGACGCTATATT
ACCCCGGGAATTGTGACTTTTGATCAACCAAAGGCTCTACTAACCTCTCG
GAACCCCGATATATATACACCTGGGTGTATTAGTCTTCTGAAGCTTGTAT
AGAATATTCAGAGTTTAATTTTTACCAAGATGATGGAAGTGGTTGAGTAT
ACTAAGCcaccgatttttttttttttacagacaGAAGAAGGTCTTGAACA
ACCAAAATGGATTTTGGATAGGTTAGATGAAATGAGGTCATTAAGTTGGT
ATCTATTTCGCTTCAAATATCAAGGACAAAAAGACACGGCTGATCTTCTG
GGTCGTCTGACAGGTGGTAAGTGAAGCAACAATTGAAAATGTTACTTATC
CCGAAACATAAATACGACCAAAACTTTGGCCCATTCTTTCTCGCCAGTGT
TCCGTTTTAGCAAAGTACGAAAAGAGCCTTTTTCATCCCAAGAATTCAGA
AATATTCagcaagattttgaaaatctggGCTCATTTGAGATGTTTGAGTC
TATTTTCCGTCTCGGATGTAAAAAAGGCTTTCTTTAaccaaacttttaaa
attacaGGTAGTCTACTTGGCATTATGAATGATAATATGAAACTCTGGAC
ATCCGGAACACAAGATGAGAAAAAAGATCTTCACAAATTGAACATTTTCT
CGGCAGTAAGTGATAGCACATCTTTCgggatttttaaatttatttcgtCG
CAATGATTAAACTTTAGTCATTCAGCTTAAAATTGTTTCACAGCCCCGCT
CAAAAATTGGTAAAACTAGATTTTTACGACTACTCCAAAAAAACGAGTTA
TCCCGATTTCATATTTTACCGATTAAGAACTTCGTAAAATCCTTgcaaaa
ttcaattttacacTTTTGACACTCAAAAACGGAAAATCAAAGTCTACGAG
GTCTTTTTAACGTATTTTTCTTCCCTAAAGGTACacctaaaatatttcaa
taactTGTCTGCATCAATCTGGTACAAACTGTATAAGTACATGAGGcctt
gatggccaaaatgttaagaacaagttaagaacattttaaggctttgggga
ctccaaaacacccgatttcttaggaaaacagacaaaataaatatccacaa
aatggtgaaaataagaacatgttaagaacatttttaggcttaaatctcaa
aaagttaaaaacatccgaatTAATCAAACCATGAAAATAGCTCCATAAAA
gtctttcattttcactttttttcttctctaGCACGATTCCACTTTATTAT
CATTGTCAGCAGCCCTTCAAACGGACATCGTTGATGAAATCCCTTTCTCT
GCTTCAATTCTTGTGGAACTTTTCAACTCCAGTGGAAAGTAAGAAGAGAT
GTGTTTGTCGCTTAGTTTGTTGCTTTTCCCTAGTTCGAGACACATTCTTG
TGAAGGCcttaaagccattgaccttttacatagttataatgtatgttgat
tcagcagattataataaatagaatcttttgtaatgaataaagaaaaatgt
ggagcaagatttttttcttccttttatttactaatttgaaaggactcttt
tattaaaattttgctgacatcagtttcagacgagtcgggtgtatataaca
ccttcctttaaatgaaaaaactgttacgattttcgcaaatttaagaAATT
AAGTTAACTTaaaatattaatatttttttgtgtcaTACTTGATTCACAAA
AGTAATATTCTCCCGAagtttaaccctttgagtgccagggtctttttttc
taagtttttttttaaaaatcgctagttcaaactttaagggcttatatctc
ctgatctagaaagaaTTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccaaa
aataacgatttctaactcaaactgggcattacaggagggcttcgccctcc
tatatagcccatgtcgtatatatacgacatcggcacttaaagggttaaaa
atttCACGAATTTGCTCCTTCGTGAAAGTTAGTTTCTGCTTAAGTTTTCC
CTATTAAGTAACACACACCATTTGCAGCAAATAATTATGTTTACTTTTCG
TTTTTAGTTATTACGTCAAGATGACATATAAACACAAGGATACATTGGCA
CCATGGAAACTTTCGGATTGTGATGAGAAATGTCCCTTAGATGATTTCAT
CAGCAAAACTAAAAATCGAGTACCGGAGGATCGGAACAAAGATTGTCAAA
CTGAATCTGAATTTTTCTCACATAAGCGTAATACTTTCTTCTTTCGTGAT
TTGCCGATTTCTTATTCAGACCTAATCCTAATTATATCCCAAAAGAGGGA
TCTCTTATTATTTTAGCATGAGCCTCAATTCGTTCTTATTCTTCAATTGG
CTTattcattgcaatgtcttccacagacccaacagttgattggttgcaag
tgacgtattaactgattttacgtcgcacttacaaccaatcagctattggg
tccgtgatgtaatgtcagaagacattgtaatggtgcacATCATGAATTAT
ATGATCCCGTCTCTCATCTAGGTATGTTCTTAAAGTGTTTCTTATTATTG
GCAATATCATGCTTCCAAGCCATTGACGATTGAGTCATTAAAAGAACATA
AGAATAATAAGgctcaaagtttcaaaaaattaagaacgcctCTTGCTGAG
CTAAGATTTACTGGctcttttgaaaaacttgagTGGCCGTAGCATTAAGG
TAGATCATCCCCAAAATGGTTCTTGATGcatctctgcttgatgctcagca
ataaAGAGACAGATCAAggggttgggggggggggaagagtggcgccctcc
cctaccttcgggtagacagctagagaaaagggagccttcgggttgcTCTC
GACTGCGATCGCAAgcttggttcttataaaaaacgtgcgttttcttttct
ttcatttgTAGGGTTGACAATGGTTTCAATTGCTTTGCTCTCCTTGAGCA
TCTTCTTATTCATAGTTATCATTTTCACATGTATTCGTACGCGTCATAGA
AAGAAGATGGCTGAAAAAACGGCCGCAAGGTATGGCGAGGATGTGAATCT
CATATCGTAACATGTCCAAATTTCAATGCATTTATTATCTTGTCCTAATG
GTATAAAAATTCTACTCTTACCATTAATGAGGCTCAAAGCAGTACAAATA
AATTCCGCTTTATCTTGATATTTTGAGATATTATTTACTTTATATATCAT
ACAACATTTAGTTATATTTATTCAAACAATTAttgtatttttattattta
ggtgtttttaaaataatttataattaacatttgtaaaatatgtatttttg
gTAAAGTTTTTGTAGTGACTTTCTATCCACtttcaatttggaaaaaatag
cgaaaatctcgaacaaatatttttgttataaccATAACGAATCACAAGAC
AGATTATTTATATTTCAATCTGAAAATAGGAATAGCTGAGAAACCAGGAG
AAACTCGTTTACATTTTTCTAGGTTTTTTCTATGAAATTTAAATCTTGCA
AACTGGGTCCTGACAGTTCCAAATCTTTGCAAAAGTAATTTCAGCTTGGT
TTTTTATACGTCAATAATTAATCATTACTCCAAgtctttttgtttgaaat
tgtgCAATTAAAAAGTAAGGGACTAGGACGAGACATATTTGATTACTCTT
TAGTAATTTAAAATGCGCAAGCTGTTTTGGGGTCTAATTATTCAGTCTAG
TTTTAATTACATTTTGCCTCTTTTTTATATTATCTGTTTTGTGGTTTAGA
TAATTAAGTCTAGCTTTGATTAGATTTTGCCTTTGTCATTATCTTTTTGG
GGAATAATTTATTCAATCAAATTGCAATTAGATTTGCATCCATCTCTAAT
AAATAAGAAGATATGCTAGAATCAGTAGACACATGGCTTTCATTCATGAT
AGGAGTGGCACTTTCTGAAGTAAGAAGCTTCTCTCTTGTAAATGGTTCTG
TAAGGATTTGTGACAGTGACTTTGACTTTTTCAAATTAGATTTGTGATAC
TGTATATttaaattacacgttttttatcagaacaaactatataagaacat
aaggcttcgatagccaaaatgttataaacaagttaagaatattttaaggc
tttgcagactctagaacaccgaatTTCATAAGAAAATGGACACAAATACT
CTAGAAATGGcggaaataagaacatgttgagaacatttttaggcttaaaa
ctcaaaaagttaagaacatctcaaggcttcaaaaatttttgatgttctta
taaaaaacgtgccaTTATTGAGTGTGTGATGTGTATGCTGTAAAATCGAT
TTGGTGGATTTAATGATCTTTCAATTGATCAGAGAAAGAATACATTTATT
TCTTACCCCGGTTCAGCAGCAATTTTTATCTTTCAATGATATCTTCTCTG
GTTTTCATGAGGTAGTACACgcttcttcttttttataagaatggtgtaaa
tccatttcatcatggatattcttaactttttggggaaaatcatcctgaaa
tattcttacaatattcttagattaggatcctaattcagactagatttaac
atttagtacatacgtctcaagcataaaatggcatttttgtgaaaggagtg
agcctgacttgggggtaattgacaaataatttaaatgctctaaaaatgac
attcttatcttgagtagcaaaatttcaCGATTGTGATATTCTtagaatat
tcttaattttttggccattttcatcatggacattcttataaagtgtattc
ttataaagaaaaagcgTAGTTGTTACTAATGGAATCCTTGGAAAGTATTT
GTTCATGGTAGAAAGAGGTCTGTGTTTAATCGAAAAGCATCCAGCTATAT
ATTCATTATCTTTGTTGTTAAGCTTGCTGCTTTGACATTGTGTGTGTTTT
TAAGCAGCACATGGTTTctggaataaaaaaaaaacgtgttctACCCCAAA
TATTTTCTCAACAACAAAGAGATGAATGGCATCGATAGACAAAACCCtgt
aaagaataaacaataaACTTTTTTAAGGTTAATTAAGACCTAACTTGTCT
TAGTTATTCAAAATCTtcgaaatttcattttcaaaagttgttGGACTTCT
TGGCAAAGAGTAGCggtgtaaaaaaaattaaaatttactaTATGAGGTTA
TActtctattttttttgaaaaagtcgaAATGTACATTCGAGCCTCTATTC
GGATATTCAAAGGATAAGCAAAAATTCTTATGTGTCGTATCCGAGTCaca
cgttttctttataagaacattggaagcgttcggatgttcttatctttttg
agttttaagcctaaaaatgttcttaacatgttcttattttcaccgttttg
tgagcatttttatctACTTTCCTTAGAAATCTTTAGAGTCTGCATAggct
taagatgttcttaacttgttcttaatattttaaccaccgaagccttatgt
tcttatatagttttttcttataaaaaacgtgtatggtgGTTTGACTGAAA
CCCCTCTTACGAGCTctgcattttttgactttttttagcCCTTCAGAAGC
ATGTTGCtttttatttgatctttttgacCAGAAAAATGCTATTGAGTCTT
GGCGGTGAAAGAAACTTCTAAAACGATCAAAAAAGACACAGATAATGACA
ACAGTACCTAAACGGGAATAACTTTGGAAGTTTCTGTGGTTTTTGAGTCT
GGTAAAGACAGTACAAAATCCAGCATATTTGTGGCTATGTTTGTCAAAGG
AAAAACTTTCTCCGATTCTCCATATATCGGATGCTAAACAAAACTTAAAC
TATACTTTTTGATATCCGTACCgagtttgtttttggtttttcttcaaCTG
TGGAACTTTGCTTCTCAAAGGAAATTGCCAAAAAGCGAATGTTGATTTGC
CTTCAAACGATCGGCTCACCTTAAATCCCCtagacatttttttataagaa
caaaccatataagaagATATGACTTTGATGGTTAAATTGTTTAGAACAAG
CTGAGAACCTTTTAAGGCCCTGCAGACCCtagaacacccaatttcttaga
aaatggacaaaaatactcaaaaaatggtgaaaataagagcatgttaagaa
cttaaaactcaaaaagttaagaacatccgaaggctttttggatgttctta
ttaaaaaacgtgtattttaggAGGAAAAAGCTCTCTTAATCCGGATGAAC
GATAGGCTTTGATCTTTGATATCCTTTTATGGTTTTTCTCCAATTATGAG
ACGTCTGTTCGCCCCTTATAGATCTGGCAACCTTCCCGAAATTTATTCAT
TTGCTTTCTAACGTGCAAAAGGACGGTGCCATGTTGGGCTTCAGGACAGA
TTCACATGGATCTTTTAGCTCAATTATTGGAGGCTCAATAATTTATATCA
ATTATCTCATATTACTTCACATTTTACATGTATTTTGAGTATAAAATGAC
TATATTCGCCTATTATATGCTTTCCTACATATTTTTATCCCTGATATATA
CAAGATATTAGGATTATGTAAAGCAGCAGCTTTAGAAGTTTCAACCGGAA
GATGGAAACGCAACTATGATTTCTCTACTAACTATCTAATCATTTTTTCA
GctgaaatactaaaaaaatagaAGAACTAATGCAATGATTCTTGGAACGT
TGTGGATACCATTATGTACATTATGTGTGTTGCTGTTGGTGACTGGTGTA
CAGTCTGATGATGAACTGATCATGTCCAATCTGGTAAGTATAAAGCacca
tacatgttttttttacaaaacacccctgtctcacaaccccggtgggattt
tttacctcagtggggataaaaactcctattgaaatcccaatggagataga
aatactattgttccaaggttaaaaaatccagtggggatgggtttggagtg
caatttctaaacattgaatgtggaatggggatgaaatcaaagtcaatttc
cctgGTGGGCTAAAATTTTAGAgtattttgccaaattttccagtggggct
ggggtcccattGGGTCTGTAACACAGGGGTGTTACAGACGTTGCTTTTTT
AAGAATATCTAGGCTcatataggggggggggggggatttccgaaatactg
aataattttgccaaaatttctgaaattctgtaaaaagatacttgcaattc
cgataccgattttttgggtatttttcctcgttttgacaaatttttcatca
aatttgatttttcatgtatgaattccgaaaaaggaggataaaaactttat
agtaccgaaatttcgaagcaagaattcatggatttccgataccgaaacaa
ttttgGAATTCCGAAATACTGTGGGAATTTATCCCGATTTCTGAAATTCC
ggagaaaaaagggtcgatttccgcaattccgaaataccatACACCCCCCA
CCATATATAGCAGAAAGTTAAGCATACGCTAAACAATTGGGCCTAAGTTT
TCAGATTTCGGCTgcttttggctggaattttatggattttcagaacttcc
ctaaaattttgcttaggaTGTAAGCAtccttcaagcatttttcacCCTTG
TCAATGTCTTAATCTAAGCATCTCCAAAtcagtttttggacctaccccgg
tggaggtcctataaattagcCTCTGttccttcgttcgttcgttcgttcgt
ttgtacAGTACCATATGCTCTTTACCTCGTTCAACTGCAATGATAAATCC
TggagggggcactcgatctgaaaactaCCGTATGCGTGGACAAAAATTAG
GATAGATTTATGTCCCTTAAATTTAGATGCCCAATCGAGCCTCCCCCTCC
CGGTCAgtaaatcaacttttttttcaatacacgcgttgcaaaattatatc
agtgcagtcaaaacatgtgattacgtgattttattacttgctttacaact
aacacctgataactttattagtgtcaataaattctaTCCAATCGAaacaa
atgtcatgtaacaagcacataaaaatttcgagtaaaagtgtgatttgtct
tcagactttaattttgcaacctgtgtattagTGTAAAATGAATAAGTTTG
ACAAAACTAAATGACTAAAACTTTAGTTCTATCAATTTTCAGGTATACAG
ACACGGTGCGCGTTCACCGATAGCAGTTTATCCTACAGACCCTTATAAAC
ATCATTGGAAAGATGGTATCGGTGGCCGACTTACCCAGGTAACTTTATCC
CCTATCACAAAATTAATCGCAAAACTTAATCCAGGAATTTTTCTAATCAC
TTTTTTATATGTCCGTTTACCGGCCAAATTATCCAATTTAAGATTGAGTT
TTTGAAACggaatctaaaaaagaaaatatatttttctagcAAAATTATAC
TTGTTTGTTGTTTGCAAGCAAAAGTAACCAATATTATctacatattttca
aaactttttcggGAGCTTCGCCATCTGAACAATATCCAGACCCCCGAGCT
TCATCAATGTACCAAATTCCCTATCAGCCATTTAGAAACTCTACAAAAAC
GGCCGCCAGCTCCAAGTGCTTGGAAAAATCCCTTTAATCTTAGCTTAAGT
AAAGTGAAACCCTTCTGGATCTACCGAAAGGATAAATTTTGTCTAGCTTG
AAAAGATCTTGGGTATAAAGCTGCTTGCGAGGCTTAAAAATGTTGCATTT
AGAGGTTTCATTTTTACTTTACTTATCTTGCtccaatccaatgtgaaaag
cttgtgaattagaattgatgagtaagcaaacgatatcactcttatttaaa
aagaaaacctttaattaTATCTTCTCTATTTGATTTGTAGAGAGGCATGC
AAATGGAATATGATTtgggaaagtttttgaaaacacgATACGTGGACACC
AAATTTGTTAGTCCTCAATATTTACATACACAGGTGAGTTCTTGAAATCC
ATTACCCATTAGCTATTAGAtctacaatcagcgccgaaatatattggcaa
ttttggggaTTTTAACGTCTTTCAAAATATAAAGCTCGTGCGAGAATTGC
AATTTTAGTACATtcactttgcttcattggatttttcgatttgggagggg
ttaagtgccttccaggctatattctcagctttattggaacatttttgagc
ttttaggtCCTGAGATcttaaggtcctaagtcttaggtctaatgttaaaa
ctctactaccaaactgtacttcaaagcacttaaaaatcaattgcggtttt
aaagttttgaggaaattccccttttgtgccaaatatttcggcgccgattg
tagaTGAATTTTAGCTGTCCTTTATTGTTAAATGGGAAACTCCTTTTCGT
TTTAAGGCGGATTTCAAAAAGAgtttaatttgaaaatcttttgtaatACG
AAATAAATGAATGTCCCCTCAGTTTTGGCGAGTTTTGTATGAAACATTCA
ATCTATGCGATTCAAAGAAAACTCTCGGAAGATTAAGTTTAAGAAAAAGC
TAACTTTTCTATTAAATGATTTAAGCGAAATGGCAAAAACAAGGAACTGA
ACCTGAATTTATTTTGGACTGTACTTTCTTTTATTGTAGGTGACAATCAG
GAGTTCCGGAGTCGACCGATGTCTTCAAAGTGCAGAAGCACAACTTGCTG
GTCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048969-exon-scaffold_15-1491911889:32099..32255 | TCONS_00048969-exon-scaffold_15-1491911889:32099..32255 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1510915933:32099..32255 | TCONS_00048969-exon-scaffold_15-1510915933:32099..32255 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1575043694:32099..32255 | TCONS_00048969-exon-scaffold_15-1575043694:32099..32255 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1491911889:45491..45586 | TCONS_00048969-exon-scaffold_15-1491911889:45491..45586 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1510915933:45491..45586 | TCONS_00048969-exon-scaffold_15-1510915933:45491..45586 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1575043694:45491..45586 | TCONS_00048969-exon-scaffold_15-1575043694:45491..45586 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1491911889:46189..46281 | TCONS_00048969-exon-scaffold_15-1491911889:46189..46281 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1510915933:46189..46281 | TCONS_00048969-exon-scaffold_15-1510915933:46189..46281 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1575043694:46189..46281 | TCONS_00048969-exon-scaffold_15-1575043694:46189..46281 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1491911889:46938..47004 | TCONS_00048969-exon-scaffold_15-1491911889:46938..47004 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1510915933:46938..47004 | TCONS_00048969-exon-scaffold_15-1510915933:46938..47004 | Clytia hemisphaerica | exon |
| TCONS_00048969-exon-scaffold_15-1575043694:46938..47004 | TCONS_00048969-exon-scaffold_15-1575043694:46938..47004 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:32099..47004 + |
Blast
BLAST of TCONS_00048969 vs. Swiss-Prot (Human)
Match: PPAP (Prostatic acid phosphatase OS=Homo sapiens GN=ACPP PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.106e-20 Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 2
Query: 137 ELIMSNLVYRHGARSPIAVYPTDPYKH-HWKDGIGGRLTQRGMQMEYDLGKFLKTRYVDTKFVSPQYLHTQVTIRSSGVDRCLQSAEAQLAGL 412
EL LV+RHG RSPI +PTDP K W G G+LTQ GM+ Y+LG++++ RY KF++ Y H QV IRS+ VDR L SA LA L
Sbjct: 34 ELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGF-GQLTQLGMEQHYELGEYIRKRY--RKFLNESYKHEQVYIRSTDVDRTLMSAMTNLAAL 123
The following BLAST results are available for this feature:
|
