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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004622 ID=TCONS_00004622|Name=TCONS_00004622|organism=Clytia hemisphaerica|type=transcript|length=240bp
CTAGAAACAAAGTAAGTAATAGACAATCTATTCTAAAATAGAACAAACGA
GCCAGTGATGGCAAATTATTATCAAACAGTACCAAACTCACAAAACGAAA
CACCTCAACAGAACCAGGATGATGGATGTAGTTGGATACTAAATGAAGAA
GATTCAAATGATCATACTCAACATAATATGGCCACTGATGACGCAATCGC
CCAATGGAATGAAATAGTCTTATTGCAGTTCCCTTGCATC Run BLAST on NCBI transcript from alignment at sc0000047:356067..357844+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004622 ID=TCONS_00004622|Name=TCONS_00004622|organism=Clytia hemisphaerica|type=transcript|length=1778bp|location=Sequence derived from alignment at sc0000047:356067..357844+ (Clytia hemisphaerica)
CTAGAAACAAAGTAAGTAATAGACAATCTATTCTAAAATAGAACAAACGA
GCCAGTGATGGCAAATTATTATCAAACAGTACCAAACTCACAAAACGAAA
CACCTCAACAGAACCAGGATGATGGATGTAGTTGGATACTAAATGAAGAA
GATTCAAATGATCATACTCAACATAATATGGCCACTGATGACGCAATCGC
CCAATGGAATGAAATAGGTATGAAAATGTTAATTCGTAATTTATTGGACA
CGCCGGAGTTTGTCTTACACTCTCTTTAGGATTCGACTGCTTCACTGTTT
TTTTACCAAGTGactgaaaatatatattttatgcCCCACTCTAGTCGAAT
ATAGTCTTTTTTTAGCTCAGAAAtacttttattaaaaataatatatatac
tTAGTCTTCGTTGTATTAAGAGTAAAATAAGGTCAAATATTCTGTAGAAA
CATCCTTGAACTCGTAAGCAAATTAATGCTAGGTTGTGGATTGGCCTCGT
CGtgttttccttttgtttttgacttttaaacgatttttgacaatttgaCC
CAACTTGATTTATGACGCCAAAAAATTGCTTTCCAAATCGGACCTTTACA
GTGTAGCCCTTCAGCAGttaaaaggtacccttacagtgcattttacctaA
CGtctctgacccttacagtgtagtttgatttcgtatcttattttgctgaa
gcccCCCAAAAATGAGTCTAAGATGTCGAccacccttaagggtggcacat
ggCGTGGGTTGGACCATATGGGTGCCCCCGGGgcgaaccctaaaaatatt
tttgtttccggtccaccgggtgacgaaaaaaaaaaaatcacccggccggc
cgcaaaaaatttttttttgctaaatttcgatcccaaaactcgatttttta
aagcactcgtaGAAGTTAAAATGATGGTCTTCTTTACNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAAAACATTCTTAAAGGttgagttgcaagcaagaattaacaaaaacaatg
cagggtttagtttgagatgaataaaatttcatttctataacaatgatcgg
cgtgtattttacagtagaacataaaatatcacattcacgaaagttttcca
aacaaacaaactaaccctaaccctaacgatgatgtacgaaaaaaaaatgc
ggccgggtgacgacgaaataaattttcacccggccggtggaccggaaaca
aaaaattttttcgggtTCGCCCGGGCATTTTTACTGTGATTAGAACCTAT
ACTAGTCTTATTGCAGTTCCCTTGCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004622-exon-sc0000047-1491911889:356067..356283 | TCONS_00004622-exon-sc0000047-1491911889:356067..356283 | Clytia hemisphaerica | exon |
| TCONS_00004622-exon-sc0000047-1510915933:356067..356283 | TCONS_00004622-exon-sc0000047-1510915933:356067..356283 | Clytia hemisphaerica | exon |
| TCONS_00004622-exon-sc0000047-1575043694:356067..356283 | TCONS_00004622-exon-sc0000047-1575043694:356067..356283 | Clytia hemisphaerica | exon |
| TCONS_00004622-exon-sc0000047-1491911889:357822..357844 | TCONS_00004622-exon-sc0000047-1491911889:357822..357844 | Clytia hemisphaerica | exon |
| TCONS_00004622-exon-sc0000047-1510915933:357822..357844 | TCONS_00004622-exon-sc0000047-1510915933:357822..357844 | Clytia hemisphaerica | exon |
| TCONS_00004622-exon-sc0000047-1575043694:357822..357844 | TCONS_00004622-exon-sc0000047-1575043694:357822..357844 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:356067..357844 + |
Blast
The following BLAST results are available for this feature:
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