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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047776 ID=TCONS_00047776|Name=TCONS_00047776|organism=Clytia hemisphaerica|type=transcript|length=859bp
GTGGCAGCAAGTTCTTCAAATGATCAGCTTCTTTCTTCAATTGATTCTAC
ATCGATTCATGatttaacaatggatgaagAAGTCTTGGTTGCAAAATCGG
TTACGATCCACCGAATTAAAATTGTGGAAGATCTAATTGAGCTATTTATG
GACCATTCAATAATGGGGTGTAACTTAGAATTTCATCTCATTGATGCGAG
AGGAAAAGAAGAAAAAGGTATCGGAATCGGGGTCACGCGTGATGTGTTTA
TCTCTTTTTGGAACAAATTTGGAGTAACTAATTGCACAGGGTTTGCTGAA
AAAGTTCCCATAGTGAGGCACACTATGACCAAAAAACATTGGGAAGCGGT
TGGGAAAATTCTTATCTAAAAAAAATTGGCTATTTTCCCATTACTATTTC
ATCAATTTTTATTACACATACCTTGTTTGGGGAGGAAAGTATTTCCGAAG
CAGATGTTATTGACGGCTTTTGGAAATTCATGTCCCCTGAGGACAAAATT
TGCATAGAGGAGTTTATGCTTAAAGACACAGATGAGTCACGAAGTTTCAA
TTACACACAAAGCCGACATCTGAAACGTTTTGGGTCTGATAAATGAAATT
GCTTTTCAAGAACTCATCCAAAAGCCAAATTATATAGCCAATATATTCAG
AGCAGTTTTCTATAAATGCAATAAAACTATTTTTGCAACAGTTGAATCAA
TCCAGAATTTTTACCTTGATAAAGCTCCAACCAACAGGAAGGTATTCGAG
CACTTAAGTTACAGTGAACCAGAAACATTAAATCAAAGGAACACTCTAGA
TTATCTGATCAAATTCCTAAGAGAATTAAGCAAAGCAGACTTACTTAGAT
TTCTAACAG Run BLAST on NCBI transcript from alignment at scaffold_136:213153..214404- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047776 ID=TCONS_00047776|Name=TCONS_00047776|organism=Clytia hemisphaerica|type=transcript|length=1252bp|location=Sequence derived from alignment at scaffold_136:213153..214404- (Clytia hemisphaerica)
GTGGCAGCAAGTTCTTCAAATGATCAGCTTCTTTCTTCAATTGATTCTAC
ATCGATTCATGGTATGTTTTTAACAAGAGATGCCGTTTTGATCAAAATGA
AAGCAAAACGCAATGCCTAATGTCTTATAACTTAGACTTTCTTTGTTCTT
TCAGTATTTTATAAAACATTTTCTGCAAAAATACACGGATCCCTAATTTG
CATCGAATTTTTTTAAAAATTAATATTTTCAAAAATTTGGTAAAAATTGG
GGTTATCTTTCAAAGATTTCCTTTTAAATTATTTTATCCATGCGGTTATT
AACCTTTGGTATTCTTTTGTCAAGGAACCACCTTTTTTTGCAGTTTGTAC
ATTTCGGATGCGGATACTTTGAAATGATTTCATCTATTTAAATGAATACA
CAACTAAAAGTGGTTTTTGTCCTTGTAATTTAAAAATAAACATATTCCCT
ATAGATTTAACAATGGATGAAGAAGTCTTGGTTGCAAAATCGGTTACGAT
CCACCGAATTAAAATTGTGGAAGATCTAATTGAGCTATTTATGGACCATT
CAATAATGGGGTGTAACTTAGAATTTCATCTCATTGATGCGAGAGGAAAA
GAAGAAAAAGGTATCGGAATCGGGGTCACGCGTGATGTGTTTATCTCTTT
TTGGAACAAATTTGGAGTAACTAATTGCACAGGGTTTGCTGAAAAAGTTC
CCATAGTGAGGCACACTATGACCAAAAAACATTGGGAAGCGGTTGGGAAA
ATTCTTATCTAAAAAAAATTGGCTATTTTCCCATTACTATTTCATCAATT
TTTATTACACATACCTTGTTTGGGGAGGAAAGTATTTCCGAAGCAGATGT
TATTGACGGCTTTTGGAAATTCATGTCCCCTGAGGACAAAATTTGCATAG
AGGAGTTTATGCTTAAAGACACAGATGAGTCACGAAGTTTCAATTACACA
CAAAGCCGACATCTGAAACGTTTTGGGTCTGATAAATGAAATTGCTTTTC
AAGAACTCATCCAAAAGCCAAATTATATAGCCAATATATTCAGAGCAGTT
TTCTATAAATGCAATAAAACTATTTTTGCAACAGTTGAATCAATCCAGAA
TTTTTACCTTGATAAAGCTCCAACCAACAGGAAGGTATTCGAGCACTTAA
GTTACAGTGAACCAGAAACATTAAATCAAAGGAACACTCTAGATTATCTG
ATCAAATTCCTAAGAGAATTAAGCAAAGCAGACTTACTTAGATTTCTAAC
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047776-exon-scaffold_136-1575043694:214344..214404 | TCONS_00047776-exon-scaffold_136-1575043694:214344..214404 | Clytia hemisphaerica | exon |
| TCONS_00047776-exon-scaffold_136-1575043694:213153..213950 | TCONS_00047776-exon-scaffold_136-1575043694:213153..213950 | Clytia hemisphaerica | exon |
| TCONS_00047776-exon-scaffold_136-1510915933:214344..214404 | TCONS_00047776-exon-scaffold_136-1510915933:214344..214404 | Clytia hemisphaerica | exon |
| TCONS_00047776-exon-scaffold_136-1510915933:213153..213950 | TCONS_00047776-exon-scaffold_136-1510915933:213153..213950 | Clytia hemisphaerica | exon |
| TCONS_00047776-exon-scaffold_136-1491911889:214344..214404 | TCONS_00047776-exon-scaffold_136-1491911889:214344..214404 | Clytia hemisphaerica | exon |
| TCONS_00047776-exon-scaffold_136-1491911889:213153..213950 | TCONS_00047776-exon-scaffold_136-1491911889:213153..213950 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_136 | supercontig | scaffold_136:213153..214404 - |
Blast
The following BLAST results are available for this feature:
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