TCONS_00047817 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047817
Unique NameTCONS_00047817
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047817 ID=TCONS_00047817|Name=TCONS_00047817|organism=Clytia hemisphaerica|type=transcript|length=136bp
tgaatttagaaaatttgaaattataaaatcaTGATAACAGTAAAATGAAA
TAAGAACAAGATCACATGGACATTGGAAAACATCACTGAAGCTAGTTCAA
GCATTGGAGAATTTATCAGAAATGGTTCTATTGACA
Run BLAST on NCBI

transcript from alignment at scaffold_136:303362..303497

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047817 ID=TCONS_00047817|Name=TCONS_00047817|organism=Clytia hemisphaerica|type=transcript|length=136bp|location=Sequence derived from alignment at scaffold_136:303362..303497 (Clytia hemisphaerica)
TGTCAATAGAACCATTTCTGATAAATTCTCCAATGCTTGAACTAGCTTCA
GTGATGTTTTCCAATGTCCATGTGATCTTGTTCTTATTTCATTTTACTGT
TATCAtgattttataatttcaaattttctaaattca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030429XLOC_030429Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047817-exon-scaffold_136-1491911889:303362..303497TCONS_00047817-exon-scaffold_136-1491911889:303362..303497Clytia hemisphaericaexon
TCONS_00047817-exon-scaffold_136-1510915933:303362..303497TCONS_00047817-exon-scaffold_136-1510915933:303362..303497Clytia hemisphaericaexon
TCONS_00047817-exon-scaffold_136-1575043694:303362..303497TCONS_00047817-exon-scaffold_136-1575043694:303362..303497Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_136supercontigscaffold_136:303362..303497 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047817 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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