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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047825 ID=TCONS_00047825|Name=TCONS_00047825|organism=Clytia hemisphaerica|type=transcript|length=1024bp
atctaacaAGCGAAATTCGACAAATGATCTATCGAAATTCAAGTTGATTT
TTCCTCCTTCTAATGAAGGATATTttaattcattgaaaattgagCTCGAG
AAATTTTACTCAAAGGAATCTAACTTAGTTCTGGCTGATATTTCCATATT
AACAAGGGTTCTTATCCCTTTTAGAAGAACTAAAGGTTAATTAATATATC
CGAGAATATATGACATTTCAATAAACAACGATAAGATCTTCGGAATGGTG
TCAAGcacatattttataaaaacattttttggattttcaaattttaccct
AAAACATATTCTCGACATTTTCTTTacttcaccattttgtgatgtgagta
tttttggcttttttctaaagaaaacgGGTGTTTTAAGGATTAATCcaatc
aattttttgttaaacgtttatttatttgttatctttttcaataatttttg
tttactttaggTGCAAAgtaatttaagaacattctaagaggAGGATTTTG
ATACCTTTTGACTGAAGTTAGGTCACATTTCTCAGCAGCCAATCTTAAAT
GACCCCCCTCAAACACCACACCAACCAATAAACAATGAACCCCCTCAACC
ACACCACAACACTTGGTCCCAGGCCTTTCACTAACACATTTATAGGATTA
TTATAGAAattcatattttcatttttagactCGTGACCAGCAAAGGGACG
AAATCAATCGGCTGGAGCAGCAGGTTGCTGCTCAACCTCAAGCTCCTCCA
CCGGCGCTAGATATTCCTAATATTTATCACTTCGAGCAGCGCCATTTTTT
ACGAATAAGTAAGCATTCTTTATCAATATTGAAGTATAGTATTCTATGGA
TAATTTCGATGGATTATTATGATTCATCTGATAGTTCTGctccatttaaa
gcaaaaagtCCTCCAATAAAAACGCAGTAATTCGATAACCAACTAAAGTG
TATCcggatataattggcagtggaaacaagaatgcctgtaacttttgata
gtcaaatatgattatggaaattct Run BLAST on NCBI transcript from alignment at scaffold_137:44672..45695- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047825 ID=TCONS_00047825|Name=TCONS_00047825|organism=Clytia hemisphaerica|type=transcript|length=1024bp|location=Sequence derived from alignment at scaffold_137:44672..45695- (Clytia hemisphaerica)
ATCTAACAAGCGAAATTCGACAAATGATCTATCGAAATTCAAGTTGATTT
TTCCTCCTTCTAATGAAGGATATTTTAATTCATTGAAAATTGAGCTCGAG
AAATTTTACTCAAAGGAATCTAACTTAGTTCTGGCTGATATTTCCATATT
AACAAGGGTTCTTATCCCTTTTAGAAGAACTAAAGGTTAATTAATATATC
CGAGAATATATGACATTTCAATAAACAACGATAAGATCTTCGGAATGGTG
TCAAGCACATATTTTATAAAAACATTTTTTGGATTTTCAAATTTTACCCT
AAAACATATTCTCGACATTTTCTTTACTTCACCATTTTGTGATGTGAGTA
TTTTTGGCTTTTTTCTAAAGAAAACGGGTGTTTTAAGGATTAATCCAATC
AATTTTTTGTTAAACGTTTATTTATTTGTTATCTTTTTCAATAATTTTTG
TTTACTTTAGGTGCAAAGTAATTTAAGAACATTCTAAGAGGAGGATTTTG
ATACCTTTTGACTGAAGTTAGGTCACATTTCTCAGCAGCCAATCTTAAAT
GACCCCCCTCAAACACCACACCAACCAATAAACAATGAACCCCCTCAACC
ACACCACAACACTTGGTCCCAGGCCTTTCACTAACACATTTATAGGATTA
TTATAGAAATTCATATTTTCATTTTTAGACTCGTGACCAGCAAAGGGACG
AAATCAATCGGCTGGAGCAGCAGGTTGCTGCTCAACCTCAAGCTCCTCCA
CCGGCGCTAGATATTCCTAATATTTATCACTTCGAGCAGCGCCATTTTTT
ACGAATAAGTAAGCATTCTTTATCAATATTGAAGTATAGTATTCTATGGA
TAATTTCGATGGATTATTATGATTCATCTGATAGTTCTGCTCCATTTAAA
GCAAAAAGTCCTCCAATAAAAACGCAGTAATTCGATAACCAACTAAAGTG
TATCCGGATATAATTGGCAGTGGAAACAAGAATGCCTGTAACTTTTGATA
GTCAAATATGATTATGGAAATTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047825-exon-scaffold_137-1575043694:44672..45695 | TCONS_00047825-exon-scaffold_137-1575043694:44672..45695 | Clytia hemisphaerica | exon |
| TCONS_00047825-exon-scaffold_137-1510915933:44672..45695 | TCONS_00047825-exon-scaffold_137-1510915933:44672..45695 | Clytia hemisphaerica | exon |
| TCONS_00047825-exon-scaffold_137-1491911889:44672..45695 | TCONS_00047825-exon-scaffold_137-1491911889:44672..45695 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_137 | supercontig | scaffold_137:44672..45695 - |
Blast
The following BLAST results are available for this feature:
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