TCONS_00047922 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047922
Unique NameTCONS_00047922
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3255

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047922 ID=TCONS_00047922|Name=TCONS_00047922|organism=Clytia hemisphaerica|type=transcript|length=3255bp
AGCGGACCGGCTAAGCTCACAGTACAACTTTTCAAAGAAGAGAGTGGTCA
TGCTCAGAGAATGACGGTTCCGAGAATGACGGCTTGAATTTTATCCTTTA
TTATTGGTAAAATACAAGCAGGTATTTTGCAAGAAGAAGATTCAAATTAT
TGTTTCTTGATATTTCTGGATTTTGGTTTCTTCTCTCATTATCAGTTAAA
GGACTTGGTAGTCATTCTGTTTTATTTTGGCTGGGTGGAAAATTGATTTG
CAAATTATTCACAATAGGATTTTCATATTTAATTTGAGACACAAGCTCTC
TTTACTCACCCTTAAAGTACAAGTGAAATAGATATGAGTACAGAATCACC
TATCCCTGTAGGTGTAACAGAATCAAAAACATCTCCAAGGGATGCTCAAA
ACATGATGAATCTGGAAACAACTGATCCAGGCCAGATTCTAGGGAGTAAT
GGTATTTTACCTAATTCGTCTTTGCTTGCCAGTGGTTTGGCTTTGCGCCC
AGGAAGTATTACTCCTTCGGACTCATTTATGATCGACTCCCAATATTATA
ATGATCGCATTAGATCGTTGGAAAGTGAGAAATTAACCATTATGATTGAA
CACAACAACTTGATCAAAGAGTTCAACAAAAGGATGGAATCACACATGGA
AGAAATTAGGTCTTTAAAAGACTCAAATATTCAATATGAAACAGAGCTGA
AAGACTTGCAAGAATTATCTGTTTTCTTGGATGATGACCGTAAAAAATGT
AGGAAACTTGCTAAAGAATGGCAACGGTTTGGGAGACATACTGTTGCTGT
AATGAGAGCAGAAATGCAAGGTTACCAGGACAAAattaaaaaccttgaaa
ttaaACAGCAAAAACTAGTCAAAGAAAATACAGAACTTAGAGATCTATGT
GTTTATCTTGATCAACAGCGGTCAGGGGCAGGAATAGATGGCCAAAGTAA
TGGATTAAACTACTCTGTTTGCCAAGAATGCACTCAGTTAAAGAAAGAGC
ATGGAACAATTCAAAGAGGAAAAAGCTTATACAATCAAAATATCACTGCA
GAAAATTTCCATGATTTGCAAAATCAAGTGGCACAACttgaaagagaaaa
agattCCCTTCATAAATTATTAATGTTCGGAGGGAAAAGTCGGCGTGATA
AAAAGCGAGTTTCATTTTCGGTGCCCACCGACGAAGAATACGACTCATCT
TCGACAACGTCGGAGCTTTCGGATCGGTTAGATTTTCCACCGTCCTTTGG
AGGAAGTCACGAGAACTTCAATACAATCAGCGAGAATTCATTGTCAAATG
TACCAAGTATTTTACGAAATGGCTCATTCCCGTTGACCATGAATGGAAGG
GGCAAGTTGTCGGACATTTCTCCGCGGAACAACGATTTGGCACGCCTTCA
TCACAACTCACTGTACCAACAAAACTCTTTGAATGAAGAAGAAATCAACG
AAATTCGAGAAAAATTGAGCCGAAGTACAACTGGAGATGCCACCTTGAGT
GAAAGAGAAATTGCCGTACTTAAAGATATGTGCcatGTTGCATCGACACA
ATCGAAACTTCGATCCAACAGTAATGCAAGTAACGCATCCAATTCAAGCT
TAAACGCCTCCTTTGACCAATCGCCTTTATCACCGCCACCCGCCCTTAAT
GAGGTTCCGCTCTATAAGCCCGCACCTCCTGCAGTTGCAACCAAACCTGC
CATCCCTAGCAAACCTGCAATGACTTCCTCTAAAGAAGATCTTCTTACTG
AAGACAACCCACAACCACTGAATTCTGTTACTGAGTCAGCAGAAAGTAAG
AAGCCACAACAGACTGGACCACCACCACTGCCGAGCTATAACGAAATTAT
GAAAGATGTCGAAGATCGGACGCCTTCGACCGCCAAGGTTGAagagaaag
aaagtgaaagtgaaacttGAATTTTTTACCAAAGCTGGGAGGAGAATATT
TGGGCTTCATGTAGGATGATATACTGATCAAGTGCCTGTGATAGGAATAA
AAAGGGAAGCAACTCGCTTAATCAGGCTCAATCAATTCACTGATTGGTAA
ACTTTGATGGAATTGAATTCAATGTCTACCAAAGTGTGATAGAAATGTTG
CGAAATGCTGCGGGTTTGCTACATGCAAGTAAACACACTTCCATTTTTAA
AGAATGTTATATGAAAGCTTTGTTTAACGTAATGGCAAAACAAGACCATT
GAGATTGGGACAAAATGCATCGACTGAAAATGGGTCAGTCTACACATAGC
CTTACACGTTCAGTcgggataaattatttttttctacaatCTGATAGAAC
TACCTTACGTGCATTAGTGGCATGGACAAAATTTTTTACATGTTCTTTTA
ACTATAGAGTGTCGTCTGTTGCACTGTCATAATGTCGCTATATAAAGCAA
ATACAGCAGTGCTGTGTTAGCTTTCAATCATGTAAGGATGACTTTAATCG
TACTTACAAGAATTCGTGAGTATCAATTTCTGGAATTAAAATGTATCTCT
GTTGTATGAAATGAGTTTTGCTAATGGATTCTGATTTGAGGTAATTGATA
CCCTTTTGATGTATACCGATGACAGTGgcttttatatattttcttattct
ttctTTTCGTAGTAGAACTCTTTAGTATCGGTATTGTGTAACATTTTCTA
CTCTTACTAAACAGTATCAAGCTATACATTAGCTACGTGCTTCAAAAAAT
GCTTCAAAGTTCTGCTATAGTCTGCGGACCCTAATTAACATTTCTATCTA
ACTGACTGGCTGACTGAATAAATGCACGGGGTAAATCACTTGGCCCCTAG
TAGTTAGTTCatgtaatgtttccagctcacccaataagagacttatacgc
atgcgtaatttgtcgttcttttaaaccacatgcagttaattcccgtgaca
aTCAAAGAGGGATGAATCTGTAGGCgtgtacagtcactttcggtcggggt
tttTTCGGGGAAATTTGACGTtctttttgtcactttttaatagttatttg
tcgttctttttttatgggtctggaaacgttagatggacAGTCTCCTACGG
CACACTTTGTGTGTTTCTCAGTCTATAATCATTGAATTTTCTTACTGtaa
aaactttgtttgattttgctactatgaaaattatattttggatAGGTAAG
GAAGACTCGTGTTTACtatttataaattaaaatttatacCACATTAATTG
TacatatttaaaaaatcattaataaGAAGATGAATGAAACAGAGTTGCCT
TAGTA
Run BLAST on NCBI

protein sequence of TCONS_00047922-protein

>TCONS_00047922-protein ID=TCONS_00047922-protein|Name=TCONS_00047922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=528bp
MSTESPIPVGVTESKTSPRDAQNMMNLETTDPGQILGSNGILPNSSLLAS
GLALRPGSITPSDSFMIDSQYYNDRIRSLESEKLTIMIEHNNLIKEFNKR
MESHMEEIRSLKDSNIQYETELKDLQELSVFLDDDRKKCRKLAKEWQRFG
RHTVAVMRAEMQGYQDKIKNLEIKQQKLVKENTELRDLCVYLDQQRSGAG
IDGQSNGLNYSVCQECTQLKKEHGTIQRGKSLYNQNITAENFHDLQNQVA
QLEREKDSLHKLLMFGGKSRRDKKRVSFSVPTDEEYDSSSTTSELSDRLD
FPPSFGGSHENFNTISENSLSNVPSILRNGSFPLTMNGRGKLSDISPRNN
DLARLHHNSLYQQNSLNEEEINEIREKLSRSTTGDATLSEREIAVLKDMC
HVASTQSKLRSNSNASNASNSSLNASFDQSPLSPPPALNEVPLYKPAPPA
VATKPAIPSKPAMTSSKEDLLTEDNPQPLNSVTESAESKKPQQTGPPPLP
SYNEIMKDVEDRTPSTAKVEEKESESET
Run BLAST on NCBI

transcript from alignment at scaffold_139:444009..451724-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047922 ID=TCONS_00047922|Name=TCONS_00047922|organism=Clytia hemisphaerica|type=transcript|length=7716bp|location=Sequence derived from alignment at scaffold_139:444009..451724- (Clytia hemisphaerica)
AGCGGACCGGCTAAGCTCACAGTACAACTTTTCAAAGAAGAGAGTGGTCA TGCTCAGAGAATGACGGTTCCGAGAATGACGGCTTGAATTTTATCCTTTA TTATTGGTAAAATACAAGCAGGTATTTTGCAAGAAGAAGATTCAAATTAT TGTTTCTTGATATTTCTGGATTTTGGTTTCTTCTCTCATTATCAGTTAAA GGACTTGGTAGTCATTCTGTTTTATTTTGGCTGGGTGGAAAATTGATTTG CAAATTATTCACAATAGGATTTTCATATTTAATTTGAGACACAAGCTCTC TTTACTCACCCTTAAAGTACAAGTGAAATAGATATGAGTACAGAATCACC TATCCCTGTAGGTGTAACAGAATCAAAAACATCTCCAAGGGATGCTCAAA ACATGATGAATCTGGAAACAACTGATCCAGGCCAGATTCTAGGGAGTAAT GGTATTTTACCTAATTCGTCTTTGCTTGCCAGTGGTTTGGCTTTGCGCCC AGGAAGTATTACTCCTTCGGACTCATTTATGATCGACTCCCAATATTATA ATGATCGCATTAGATCGTTGGAAAGTGAGAAATTAACCATTATGATTGAA CACAACAACTTGATCAAAGAGTTCAACAAAAGGATGGAATCACACATGGA AGAAATTAGGTCTTTAAAAGACTCAAATATTCAATATGAAACAGAGCTGA AAGACTTGCAAGAATTATCTGTTTTCTTGGATGATGACCGTAAAAAATGT AGGAAACTTGCTAAAGAATGGCAACGGTTTGGGAGACATACTGTTGCTGT AATGAGAGCAGAAATGCAAGGTTACCAGGACAAAATTAAAAACCTTGAAA TTAAACAGCAAAAACTAGTCAAAGAAAATACAGAACTTAGAGATCTATGT GTTTATCTTGATCAACAGCGGTCAGGGGCAGGAATAGATGGCCAAAGTAA TGGATTAAACTACTCTGTTTGCCAAGAATGCACTCAGTTAAAGAAAGAGC ATGGAACAATTCAAAGAGGAAAAAGCTTATACAATCAAAGTAAGTTCTTT TACTAAAACTAAGTAAAATCATACTTGTAATTTTGAATGTCATCATTGTT ATCTAGGATGTCGGCGTTAGGGGAGTTGCCAAAATTAGACATAATCATGA TATATAATAGCTTGGGGATCCTAAAATTAGAGTAAAATAGTCAAAAATTT AGAAATACTGATTCAGTGGTGCCAAAAATCTTAAACTGAGATATTTTTTT TCTTACTTCAAAATGATAAAGGAAAAACTCCCCAGTAGCTATTAAATTGA TGCTTTATATACCATCAACCCTGTTTTTAAGCATTATACTTAATATCGTT CCTGTTTTAATATGCCTTTTTATCATTACTATTATAGTTCTCCCTTTTCT TTTGACTTTGCTCCTTAGTTAAGAGTGATTTAATCAATTAATCGAACATT CCCTACTATTTGAATGTCATTAGCTAAGTAATAATGTTGTTGTCATAAAA TAATGATCCATGACCCCTTGTCATTGAGAATTATTTTTCAAATACCATTC TTATAAGGACAACTAAGACAATTAAATGATCATATTATCTACCACTTGCA TTCATACTTTATTTATTTTAGATAAAAAAGGTTTAATTATTTTGATGGAT TAATCCATTTTCTAATCTAAATTTAGGATATTTTTGAAAATTACAAGCAA AAAAAAAGCTGGGGGCATGGTAAAAAATTAGAAGAAAATTTTATTTTCAA TTTATTTTAAGGTAGGAATTCGGCAATTGATTTTAATCAATTATTATCAT TTTATTCAGATATCACTGCAGAAAATTTCCATGATTTGCAAAATCAAGTG GCACAACTTGAAAGAGAAAAAGATTCCCTTCATAAATTATTAGTAAGGAA TACTTTTTTTCATCTATCTCTATTTAAAAATTCTCCATTCAAAAAAAATA AGAAATGTATCAATGAAATGTTATTATTATGTTTAGTAACAAGTGAATAC TACTCAATTTTTTAATATATCTTGCACCCAAATTTGAGTTATTTCTTTTC CATTTTTAATTAGATGTTCGGAGGGAAAAGTCGGCGTGATAAAAAGCGAG TTTCATTTTCGGTGCCCACCGACGAAGAATACGACTCATCTTCGGTAAGA TTTTGTTTATCTGTTAATTTCGTATTACCTCTTGTTTTAAGAAAAAACAA AAGAAAACTGTATCGTCAGTCGATTTTTTCGAAAAGGAATTCAACAAAAC TAGGTAGCCCAAATCTTTTCGTTGTACGTGATTCGAAATGACTTTTGTAA ATCATCTTTGTTGAAAGCTGGCGTAACCTGAGCAGATTTTTAATGTGTCA TAGTTGAAGGGCTGCTTTATTATTTACCTTCTCTTTATGATAGTCAATGC ATATTTTTCTTATGATTTGTATCTTTTATCAAAATTCACATACACGTGAT AAAGTTTGTTAACAAAATCTAAAAGTTTGAAAATAAAACTTTATGGTAAC TTTGTTATACTGTTATCAGTGAAAAGGTGGTTTTCGCGAAATCTTTAGGC TATAAGCTTTTTGACACGAAATAACGTAATAAAGATAAAATAGAGGTCTC CTTTATGACATTTCATCTTTGTAAAAACCTTGAAACAGACTTGTTACAAT TACTCCTTAAATCCTTCGAAGTCTCTTTTGGTTTTTTCGTCCATTCATCA AAGACATACATTTCAGTGAAAATAAGATTAACTTATCGGATTAACAAGGA AACAATGATTTTGATTTGTATTGTCTGAAATATGCGACCTAACTGTTATT TCTTTANCGGTTTTTTCATCCATTCATCAAAGACATACATTTCAGTGAAA ATAAGATTAACTTATCGGATTAACAAGGAAACAATGATTTTGATTTGTAT TGTCTGAAATATGCGACCTAACTGTTATTTCTTTAAAAAATCCTGCTTCC TTCTCCCATTTTGATTTTATAAACGGTTTTCCATCTAACAATTTTGTAAG AATTTCACACGTCTCTATAATAATAAGGAAGACTTTATTAAGATGATTGA TACCGTTAGCTTCCACATACCTTTTTCTTTAAACAGACCGTACATTTAGT AACCGCCTTGAAGATTATTGTGAGGCAGGGGTTAACGTTTTCACGCTGGA TCTTTGCCAAGAGGAGGAGATTCTCTATTAAAAAATCCCGTTCGACTGAT CTTGCAAAAACTTCCTAATGAACTATTACGATTACCCCTTGTAGAAAATT GTTTGGAATGTATGCAAAAATTAACTTTGAACTATTATTACAGCTTTAAC ATTTCTACCATCGTATTATAGACAACGTCGGAGCTTTCGGATCGGTTAGA TTTTCCACCGTCCTTTGGAGGAAGTCACGAGAACTTCAATACAATCAGTA AGTTTGCTTTAATACTTAGAATCGTTTATCTTTTACACCCCTGTATCATA AACTTAATATTCTCCAACCTGACTTCTCACTCTATTCTTGTAATTTACCT TTTCTGTTACATAAATATATATCAACCACATTATGTCATTGAATAAAGCT GCATGACCTGAATAAACATGATGGGTTCATTTTTAGTTAGAATCTATATT TCAATTCGTTGCTAGGTTCTAGAACTGTAGTAATTTACGGACCTTTTGTT CGTCTTTAGGCGAGAATTCATTGTCAAATGTACCAAGTATTTTACGAAAT GGCTCATTCCCGTTGACCATGAATGGAAGGGGCAAGGTAAGAAAATCTTC ATTGTTTTAATAACAAACTTTTGCCCTCTGCTTATCTTAATAATTTCTTT AGGCAACTTAGCTTCGAACATCAAGGAAGATTAAAATCCCTTTCAAGTGC ATTCGAAAGTATTTTAATTTTGAAAGTTTACTTTAGAAATCTTAGCTTCA TTGAGAATTGGAGGGATCATTAATGCTATTATACATAGCTATCAATCTCA CTACTAGCTTGATCACAAGGTCTTAATTATAGGATCGGTAATCGGTAATA ATCTTTTTAAATCCGAGATTCGGAATCTCATCAATATAACATCTTTACGC TTAAGTCGATTGTTTATTTCTTTTGGATAACGGGATCTTGAGAAAATTTT AATGGCGCAGGTTGAAAAATCAGTAGCAATATCCTTAATGGTAAATGAGA AAAATATAAGATCACTTTTATTACGGAAGGAATTACGTCCTAATACGTAA GTTCCTCTCGTCCAACACAGTTTTCTCCAAACCCTTAATCTAATGTTGTT TTTTACAAATCATGCTGCTCTATAGAGTTTCATCTAAATATGTTTTTATT AAGCTTTTATTCTGTGAGGTATTGGCATGTCAAACATGCGAGGATTACTA ATACCCTCTATATGGGATCCTTTATCATTTATAGCTTCTTTTTTTAATTT TGTGCATTTTTTCTAAGATGCTTCTCTGCCTCTCTTGACAACGCTGTAAC TCTCTGATGAATGATTTTAGAAACTAAGCGCTTTTCCTCAATATTCCAAT TTTCCTGATTTTTGCCCTTGATATGTTCCAAATCGTAATAAAGGTACTAA AACGTACAAACCATATTCTCGGGTACCCAATAAGAAAGGGGGTTTAGAAT AAGCGGGGTACGGAAAAATTCTCATAAGCGGGTGGGGGGGGGGGTTGGAA AAAAAGGGGGGGAAAAAAATTTGAATAGGGGGGGGGGGGGGGAAAAAATC CCAAAAGGGGGGGGGGGGGGGAAAAAATCCCAAAAGGGGGGGGGGGGGGG GGTTGGAATAAGAATGTACTGTATGGAAAATTTTCAAAAAATTAATTAGC GCCCCACCCTGCTTATTAGGTACCCGAGAGTAAGAACCGTATTTCCATAC AAGTTACGAAGCCAAAAATAAGCATACTATAAACTTGCGTTTTTTGCTAA AGCTTTTGACTTTTCTCATTGGAGGTTGACTGCCTCTATGATAAAAACAT CCGCTATTCTAAAAAAAGTCAAACTGTTTATACTAGAAGTTTTGCTTATA AAATCAAGAAAAACGTCTTTTTAGCTTTTAGCTTGGGTCGATAGGTAAAT TAGAAATCAAAACTCTTTTTTTTGATTTTCGTTTCCAGTTGTCGGACATT TCTCCGCGGAACAACGATTTGGCACGCCTTCATCACAACTCACTGTACCA ACAAAACTCTTTGAATGAAGAAGAAATCAACGAAATTCGAGAAAAATTGA GCCGAAGTACAACTGGAGATGCCACCTTGAGTGAAAGAGAAATTGCCGTA CTTAAAGATATGTGCCATGTAAGATTTTTTTTATTTTTATTTAACATATT AAATATGTAATAACTGTTGTTTGTATGCTCGACTTTAGTCAAAGTCTTGT AGCAAGTCCTCAAAATTAAGGTTTTTAGTTCAAGACACAGTTGCAGTTTA TTCTGGCGAATTAAAACTCGAACGGGAATCTCGTTAAATTACGGAGAGAT GCGAATTATAGCATTTTACGAAGATATCTCCTCGACGGGGACTGAAAATT AATTTGAATTAAAGAAAGATTCGAATAAAAGAAGTTCGTATTAGCGAGAG TCCGTACTGTATATCATTTACCGGCTTCACATATTTCTTACGTACTCTTT TATCACTGAGAGGAAGAGGAAAATTATTGCCAATAGCTCAGGATTTCCTC ATGATAATTGTCTGTCGTTTGTCTCAAATTAAGCGGAGATGAAGCCAATT ATTGGAACATGTTTATCCAAAGTATTCGTTTGACATCATAAGTATCGCCT ACTAAGCAAAGGAAGCTCAACTTTTTTGAAATCGGAATTTTCATCCGGCG CTGGCCATTATGTTATTTTAAACAAAAACAATTATTTTCACGTTATCAAA GATTTCTTAGCTTTCTCGCCCTCGTTTAGCTTAAAATCTGAACTATTTTA AGCATATTGGTTATATGCCAAACTTACTTATTTAGAAACCCAACTTGGAA TTGTGTTCTCTTTTCATTTCAATAATCATCTTTTTTAACTTTTGCAGGTT GCATCGACACAATCGAAACTTCGATCCAACAGTAATGCAAGTAACGCATC CAATTCAAGCTTAAACGCCTCCTTTGACCAATCGCCTTTATCACCGCCAC CCGCCCTTAATGAGGTTCCGCTCTATAAGCCCGCACCTCCTGCAGTTGCA ACCAAACCTGCCATCCCTAGCAAACCTGCAATGACTTCCTCTAAAGAAGA TCTTCTTACTGAAGACAACCCACAACCACTGAATTCTGTTACTGAGTCAG CAGAAAGTAAGAAGCCACAACAGACTGGACCACCACCACTGCCGAGCTAT AACGAAATTATGAAAGATGTCGAAGATCGGACGCCTTCGACCGCCAAGGT TGAAGAGAAAGAAAGTGAAAGTGAAACTTGAATTTTTTACCAAAGCTGGG AGGAGAATATTTGGGCTTCATGTAGGATGATATACTGATCAAGTGCCTGT GATAGGAATAAAAAGGGAAGCAACTCGCTTAATCAGGCTCAATCAATTCA CTGATTGGTAAACTTTGATGGAATTGAATTCAATGTCTACCAAAGTGTGA TAGAAATGTTGCGAAATGCTGCGGGTTTGCTACATGCAAGTAAACACACT TCCATTTTTAAAGAATGTTATATGAAAGCTTTGTTTAACGTAATGGCAAA ACAAGACCATTGAGATTGGGACAAAATGCATCGACTGAAAATGGGTCAGT CTACACATAGCCTTACACGTTCAGTCGGGATAAATTATTTTTTTCTACAA TCTGATAGAACTACCTTACGTGCATTAGTGGCATGGACAAAATTTTTTAC ATGTTCTTTTAACTATAGAGTGTCGTCTGTTGCACTGTCATAATGTCGCT ATATAAAGCAAATACAGCAGTGCTGTGTTAGCTTTCAATCATGTAAGGAT GACTTTAATCGTACTTACAAGAATTCGTGAGTATCAATTTCTGGAATTAA AATGTATCTCTGTTGTATGAAATGAGTTTTGCTAATGGATTCTGATTTGA GGTAATTGATACCCTTTTGATGTATACCGATGACAGTGGCTTTTATATAT TTTCTTATTCTTTCTTTTCGTAGTAGAACTCTTTAGTATCGGTATTGTGT AACATTTTCTACTCTTACTAAACAGTATCAAGCTATACATTAGCTACGTG CTTCAAAAAATGCTTCAAAGTTCTGCTATAGTCTGCGGACCCTAATTAAC ATTTCTATCTAACTGACTGGCTGACTGAATAAATGCACGGGGTAAATCAC TTGGCCCCTAGTAGTTAGTTCATGTAATGTTTCCAGCTCACCCAATAAGA GACTTATACGCATGCGTAATTTGTCGTTCTTTTAAACCACATGCAGTTAA TTCCCGTGACAATCAAAGAGGGATGAATCTGTAGGCGTGTACAGTCACTT TCGGTCGGGGTTTTTTCGGGGAAATTTGACGTTCTTTTTGTCACTTTTTA ATAGTTATTTGTCGTTCTTTTTTTATGGGTCTGGAAACGTTAGATGGACA GTCTCCTACGGCACACTTTGTGTGTTTCTCAGTCTATAATCATTGAATTT TCTTACTGTAAAAACTTTGTTTGATTTTGCTACTATGAAAATTATATTTT GGATAGGTAAGGAAGACTCGTGTTTACTATTTATAAATTAAAATTTATAC CACATTAATTGTACATATTTAAAAAATCATTAATAAGAAGATGAATGAAA CAGAGTTGCCTTAGTA

Coding sequence (CDS) from alignment at scaffold_139:444009..451724-

>TCONS_00047922 ID=TCONS_00047922|Name=TCONS_00047922|organism=Clytia hemisphaerica|type=CDS|length=11109bp|location=Sequence derived from alignment at scaffold_139:444009..451724- (Clytia hemisphaerica)
GTTGCATCGACACAATCGAAACTTCGATCCAACAGTAATGCAAGTAACGC
ATCCAATTCAAGCTTAAACGCCTCCTTTGACCAATCGCCTTTATCACCGC
CACCCGCCCTTAATGAGGTTCCGCTCTATAAGCCCGCACCTCCTGCAGTT
GCAACCAAACCTGCCATCCCTAGCAAACCTGCAATGACTTCCTCTAAAGA
AGATCTTCTTACTGAAGACAACCCACAACCACTGAATTCTGTTACTGAGT
CAGCAGAAAGTAAGAAGCCACAACAGACTGGACCACCACCACTGCCGAGC
TATAACGAAATTATGAAAGATGTCGAAGATCGGACGCCTTCGACCGCCAA
GGTTGAAGAGAAAGAAAGTGAAAGTGAAACTTGATTGTCGGACATTTCTC
CGCGGAACAACGATTTGGCACGCCTTCATCACAACTCACTGTACCAACAA
AACTCTTTGAATGAAGAAGAAATCAACGAAATTCGAGAAAAATTGAGCCG
AAGTACAACTGGAGATGCCACCTTGAGTGAAAGAGAAATTGCCGTACTTA
AAGATATGTGCCATGCGAGAATTCATTGTCAAATGTACCAAGTATTTTAC
GAAATGGCTCATTCCCGTTGACCATGAATGGAAGGGGCAAGACAACGTCG
GAGCTTTCGGATCGGTTAGATTTTCCACCGTCCTTTGGAGGAAGTCACGA
GAACTTCAATACAATCAATGTTCGGAGGGAAAAGTCGGCGTGATAAAAAG
CGAGTTTCATTTTCGGTGCCCACCGACGAAGAATACGACTCATCTTCGAT
ATCACTGCAGAAAATTTCCATGATTTGCAAAATCAAGTGGCACAACTTGA
AAGAGAAAAAGATTCCCTTCATAAATTATTAATGAGTACAGAATCACCTA
TCCCTGTAGGTGTAACAGAATCAAAAACATCTCCAAGGGATGCTCAAAAC
ATGATGAATCTGGAAACAACTGATCCAGGCCAGATTCTAGGGAGTAATGG
TATTTTACCTAATTCGTCTTTGCTTGCCAGTGGTTTGGCTTTGCGCCCAG
GAAGTATTACTCCTTCGGACTCATTTATGATCGACTCCCAATATTATAAT
GATCGCATTAGATCGTTGGAAAGTGAGAAATTAACCATTATGATTGAACA
CAACAACTTGATCAAAGAGTTCAACAAAAGGATGGAATCACACATGGAAG
AAATTAGGTCTTTAAAAGACTCAAATATTCAATATGAAACAGAGCTGAAA
GACTTGCAAGAATTATCTGTTTTCTTGGATGATGACCGTAAAAAATGTAG
GAAACTTGCTAAAGAATGGCAACGGTTTGGGAGACATACTGTTGCTGTAA
TGAGAGCAGAAATGCAAGGTTACCAGGACAAAATTAAAAACCTTGAAATT
AAACAGCAAAAACTAGTCAAAGAAAATACAGAACTTAGAGATCTATGTGT
TTATCTTGATCAACAGCGGTCAGGGGCAGGAATAGATGGCCAAAGTAATG
GATTAAACTACTCTGTTTGCCAAGAATGCACTCAGTTAAAGAAAGAGCAT
GGAACAATTCAAAGAGGAAAAAGCTTATACAATCAAAGTTGCATCGACAC
AATCGAAACTTCGATCCAACAGTAATGCAAGTAACGCATCCAATTCAAGC
TTAAACGCCTCCTTTGACCAATCGCCTTTATCACCGCCACCCGCCCTTAA
TGAGGTTCCGCTCTATAAGCCCGCACCTCCTGCAGTTGCAACCAAACCTG
CCATCCCTAGCAAACCTGCAATGACTTCCTCTAAAGAAGATCTTCTTACT
GAAGACAACCCACAACCACTGAATTCTGTTACTGAGTCAGCAGAAAGTAA
GAAGCCACAACAGACTGGACCACCACCACTGCCGAGCTATAACGAAATTA
TGAAAGATGTCGAAGATCGGACGCCTTCGACCGCCAAGGTTGAAGAGAAA
GAAAGTGAAAGTGAAACTTGATTGTCGGACATTTCTCCGCGGAACAACGA
TTTGGCACGCCTTCATCACAACTCACTGTACCAACAAAACTCTTTGAATG
AAGAAGAAATCAACGAAATTCGAGAAAAATTGAGCCGAAGTACAACTGGA
GATGCCACCTTGAGTGAAAGAGAAATTGCCGTACTTAAAGATATGTGCCA
TGCGAGAATTCATTGTCAAATGTACCAAGTATTTTACGAAATGGCTCATT
CCCGTTGACCATGAATGGAAGGGGCAAGACAACGTCGGAGCTTTCGGATC
GGTTAGATTTTCCACCGTCCTTTGGAGGAAGTCACGAGAACTTCAATACA
ATCAATGTTCGGAGGGAAAAGTCGGCGTGATAAAAAGCGAGTTTCATTTT
CGGTGCCCACCGACGAAGAATACGACTCATCTTCGATATCACTGCAGAAA
ATTTCCATGATTTGCAAAATCAAGTGGCACAACTTGAAAGAGAAAAAGAT
TCCCTTCATAAATTATTAATGAGTACAGAATCACCTATCCCTGTAGGTGT
AACAGAATCAAAAACATCTCCAAGGGATGCTCAAAACATGATGAATCTGG
AAACAACTGATCCAGGCCAGATTCTAGGGAGTAATGGTATTTTACCTAAT
TCGTCTTTGCTTGCCAGTGGTTTGGCTTTGCGCCCAGGAAGTATTACTCC
TTCGGACTCATTTATGATCGACTCCCAATATTATAATGATCGCATTAGAT
CGTTGGAAAGTGAGAAATTAACCATTATGATTGAACACAACAACTTGATC
AAAGAGTTCAACAAAAGGATGGAATCACACATGGAAGAAATTAGGTCTTT
AAAAGACTCAAATATTCAATATGAAACAGAGCTGAAAGACTTGCAAGAAT
TATCTGTTTTCTTGGATGATGACCGTAAAAAATGTAGGAAACTTGCTAAA
GAATGGCAACGGTTTGGGAGACATACTGTTGCTGTAATGAGAGCAGAAAT
GCAAGGTTACCAGGACAAAATTAAAAACCTTGAAATTAAACAGCAAAAAC
TAGTCAAAGAAAATACAGAACTTAGAGATCTATGTGTTTATCTTGATCAA
CAGCGGTCAGGGGCAGGAATAGATGGCCAAAGTAATGGATTAAACTACTC
TGTTTGCCAAGAATGCACTCAGTTAAAGAAAGAGCATGGAACAATTCAAA
GAGGAAAAAGCTTATACAATCAAAGTTGCATCGACACAATCGAAACTTCG
ATCCAACAGTAATGCAAGTAACGCATCCAATTCAAGCTTAAACGCCTCCT
TTGACCAATCGCCTTTATCACCGCCACCCGCCCTTAATGAGGTTCCGCTC
TATAAGCCCGCACCTCCTGCAGTTGCAACCAAACCTGCCATCCCTAGCAA
ACCTGCAATGACTTCCTCTAAAGAAGATCTTCTTACTGAAGACAACCCAC
AACCACTGAATTCTGTTACTGAGTCAGCAGAAAGTAAGAAGCCACAACAG
ACTGGACCACCACCACTGCCGAGCTATAACGAAATTATGAAAGATGTCGA
AGATCGGACGCCTTCGACCGCCAAGGTTGAAGAGAAAGAAAGTGAAAGTG
AAACTTGATTGTCGGACATTTCTCCGCGGAACAACGATTTGGCACGCCTT
CATCACAACTCACTGTACCAACAAAACTCTTTGAATGAAGAAGAAATCAA
CGAAATTCGAGAAAAATTGAGCCGAAGTACAACTGGAGATGCCACCTTGA
GTGAAAGAGAAATTGCCGTACTTAAAGATATGTGCCATGCGAGAATTCAT
TGTCAAATGTACCAAGTATTTTACGAAATGGCTCATTCCCGTTGACCATG
AATGGAAGGGGCAAGACAACGTCGGAGCTTTCGGATCGGTTAGATTTTCC
ACCGTCCTTTGGAGGAAGTCACGAGAACTTCAATACAATCAATGTTCGGA
GGGAAAAGTCGGCGTGATAAAAAGCGAGTTTCATTTTCGGTGCCCACCGA
CGAAGAATACGACTCATCTTCGATATCACTGCAGAAAATTTCCATGATTT
GCAAAATCAAGTGGCACAACTTGAAAGAGAAAAAGATTCCCTTCATAAAT
TATTAATGAGTACAGAATCACCTATCCCTGTAGGTGTAACAGAATCAAAA
ACATCTCCAAGGGATGCTCAAAACATGATGAATCTGGAAACAACTGATCC
AGGCCAGATTCTAGGGAGTAATGGTATTTTACCTAATTCGTCTTTGCTTG
CCAGTGGTTTGGCTTTGCGCCCAGGAAGTATTACTCCTTCGGACTCATTT
ATGATCGACTCCCAATATTATAATGATCGCATTAGATCGTTGGAAAGTGA
GAAATTAACCATTATGATTGAACACAACAACTTGATCAAAGAGTTCAACA
AAAGGATGGAATCACACATGGAAGAAATTAGGTCTTTAAAAGACTCAAAT
ATTCAATATGAAACAGAGCTGAAAGACTTGCAAGAATTATCTGTTTTCTT
GGATGATGACCGTAAAAAATGTAGGAAACTTGCTAAAGAATGGCAACGGT
TTGGGAGACATACTGTTGCTGTAATGAGAGCAGAAATGCAAGGTTACCAG
GACAAAATTAAAAACCTTGAAATTAAACAGCAAAAACTAGTCAAAGAAAA
TACAGAACTTAGAGATCTATGTGTTTATCTTGATCAACAGCGGTCAGGGG
CAGGAATAGATGGCCAAAGTAATGGATTAAACTACTCTGTTTGCCAAGAA
TGCACTCAGTTAAAGAAAGAGCATGGAACAATTCAAAGAGGAAAAAGCTT
ATACAATCAAAGTTGCATCGACACAATCGAAACTTCGATCCAACAGTAAT
GCAAGTAACGCATCCAATTCAAGCTTAAACGCCTCCTTTGACCAATCGCC
TTTATCACCGCCACCCGCCCTTAATGAGGTTCCGCTCTATAAGCCCGCAC
CTCCTGCAGTTGCAACCAAACCTGCCATCCCTAGCAAACCTGCAATGACT
TCCTCTAAAGAAGATCTTCTTACTGAAGACAACCCACAACCACTGAATTC
TGTTACTGAGTCAGCAGAAAGTAAGAAGCCACAACAGACTGGACCACCAC
CACTGCCGAGCTATAACGAAATTATGAAAGATGTCGAAGATCGGACGCCT
TCGACCGCCAAGGTTGAAGAGAAAGAAAGTGAAAGTGAAACTTGATTGTC
GGACATTTCTCCGCGGAACAACGATTTGGCACGCCTTCATCACAACTCAC
TGTACCAACAAAACTCTTTGAATGAAGAAGAAATCAACGAAATTCGAGAA
AAATTGAGCCGAAGTACAACTGGAGATGCCACCTTGAGTGAAAGAGAAAT
TGCCGTACTTAAAGATATGTGCCATGCGAGAATTCATTGTCAAATGTACC
AAGTATTTTACGAAATGGCTCATTCCCGTTGACCATGAATGGAAGGGGCA
AGACAACGTCGGAGCTTTCGGATCGGTTAGATTTTCCACCGTCCTTTGGA
GGAAGTCACGAGAACTTCAATACAATCAATGTTCGGAGGGAAAAGTCGGC
GTGATAAAAAGCGAGTTTCATTTTCGGTGCCCACCGACGAAGAATACGAC
TCATCTTCGATATCACTGCAGAAAATTTCCATGATTTGCAAAATCAAGTG
GCACAACTTGAAAGAGAAAAAGATTCCCTTCATAAATTATTAATGAGTAC
AGAATCACCTATCCCTGTAGGTGTAACAGAATCAAAAACATCTCCAAGGG
ATGCTCAAAACATGATGAATCTGGAAACAACTGATCCAGGCCAGATTCTA
GGGAGTAATGGTATTTTACCTAATTCGTCTTTGCTTGCCAGTGGTTTGGC
TTTGCGCCCAGGAAGTATTACTCCTTCGGACTCATTTATGATCGACTCCC
AATATTATAATGATCGCATTAGATCGTTGGAAAGTGAGAAATTAACCATT
ATGATTGAACACAACAACTTGATCAAAGAGTTCAACAAAAGGATGGAATC
ACACATGGAAGAAATTAGGTCTTTAAAAGACTCAAATATTCAATATGAAA
CAGAGCTGAAAGACTTGCAAGAATTATCTGTTTTCTTGGATGATGACCGT
AAAAAATGTAGGAAACTTGCTAAAGAATGGCAACGGTTTGGGAGACATAC
TGTTGCTGTAATGAGAGCAGAAATGCAAGGTTACCAGGACAAAATTAAAA
ACCTTGAAATTAAACAGCAAAAACTAGTCAAAGAAAATACAGAACTTAGA
GATCTATGTGTTTATCTTGATCAACAGCGGTCAGGGGCAGGAATAGATGG
CCAAAGTAATGGATTAAACTACTCTGTTTGCCAAGAATGCACTCAGTTAA
AGAAAGAGCATGGAACAATTCAAAGAGGAAAAAGCTTATACAATCAAAGT
TGCATCGACACAATCGAAACTTCGATCCAACAGTAATGCAAGTAACGCAT
CCAATTCAAGCTTAAACGCCTCCTTTGACCAATCGCCTTTATCACCGCCA
CCCGCCCTTAATGAGGTTCCGCTCTATAAGCCCGCACCTCCTGCAGTTGC
AACCAAACCTGCCATCCCTAGCAAACCTGCAATGACTTCCTCTAAAGAAG
ATCTTCTTACTGAAGACAACCCACAACCACTGAATTCTGTTACTGAGTCA
GCAGAAAGTAAGAAGCCACAACAGACTGGACCACCACCACTGCCGAGCTA
TAACGAAATTATGAAAGATGTCGAAGATCGGACGCCTTCGACCGCCAAGG
TTGAAGAGAAAGAAAGTGAAAGTGAAACTTGATTGTCGGACATTTCTCCG
CGGAACAACGATTTGGCACGCCTTCATCACAACTCACTGTACCAACAAAA
CTCTTTGAATGAAGAAGAAATCAACGAAATTCGAGAAAAATTGAGCCGAA
GTACAACTGGAGATGCCACCTTGAGTGAAAGAGAAATTGCCGTACTTAAA
GATATGTGCCATGCGAGAATTCATTGTCAAATGTACCAAGTATTTTACGA
AATGGCTCATTCCCGTTGACCATGAATGGAAGGGGCAAGACAACGTCGGA
GCTTTCGGATCGGTTAGATTTTCCACCGTCCTTTGGAGGAAGTCACGAGA
ACTTCAATACAATCAATGTTCGGAGGGAAAAGTCGGCGTGATAAAAAGCG
AGTTTCATTTTCGGTGCCCACCGACGAAGAATACGACTCATCTTCGATAT
CACTGCAGAAAATTTCCATGATTTGCAAAATCAAGTGGCACAACTTGAAA
GAGAAAAAGATTCCCTTCATAAATTATTAATGAGTACAGAATCACCTATC
CCTGTAGGTGTAACAGAATCAAAAACATCTCCAAGGGATGCTCAAAACAT
GATGAATCTGGAAACAACTGATCCAGGCCAGATTCTAGGGAGTAATGGTA
TTTTACCTAATTCGTCTTTGCTTGCCAGTGGTTTGGCTTTGCGCCCAGGA
AGTATTACTCCTTCGGACTCATTTATGATCGACTCCCAATATTATAATGA
TCGCATTAGATCGTTGGAAAGTGAGAAATTAACCATTATGATTGAACACA
ACAACTTGATCAAAGAGTTCAACAAAAGGATGGAATCACACATGGAAGAA
ATTAGGTCTTTAAAAGACTCAAATATTCAATATGAAACAGAGCTGAAAGA
CTTGCAAGAATTATCTGTTTTCTTGGATGATGACCGTAAAAAATGTAGGA
AACTTGCTAAAGAATGGCAACGGTTTGGGAGACATACTGTTGCTGTAATG
AGAGCAGAAATGCAAGGTTACCAGGACAAAATTAAAAACCTTGAAATTAA
ACAGCAAAAACTAGTCAAAGAAAATACAGAACTTAGAGATCTATGTGTTT
ATCTTGATCAACAGCGGTCAGGGGCAGGAATAGATGGCCAAAGTAATGGA
TTAAACTACTCTGTTTGCCAAGAATGCACTCAGTTAAAGAAAGAGCATGG
AACAATTCAAAGAGGAAAAAGCTTATACAATCAAAGTTGCATCGACACAA
TCGAAACTTCGATCCAACAGTAATGCAAGTAACGCATCCAATTCAAGCTT
AAACGCCTCCTTTGACCAATCGCCTTTATCACCGCCACCCGCCCTTAATG
AGGTTCCGCTCTATAAGCCCGCACCTCCTGCAGTTGCAACCAAACCTGCC
ATCCCTAGCAAACCTGCAATGACTTCCTCTAAAGAAGATCTTCTTACTGA
AGACAACCCACAACCACTGAATTCTGTTACTGAGTCAGCAGAAAGTAAGA
AGCCACAACAGACTGGACCACCACCACTGCCGAGCTATAACGAAATTATG
AAAGATGTCGAAGATCGGACGCCTTCGACCGCCAAGGTTGAAGAGAAAGA
AAGTGAAAGTGAAACTTGATTGTCGGACATTTCTCCGCGGAACAACGATT
TGGCACGCCTTCATCACAACTCACTGTACCAACAAAACTCTTTGAATGAA
GAAGAAATCAACGAAATTCGAGAAAAATTGAGCCGAAGTACAACTGGAGA
TGCCACCTTGAGTGAAAGAGAAATTGCCGTACTTAAAGATATGTGCCATG
CGAGAATTCATTGTCAAATGTACCAAGTATTTTACGAAATGGCTCATTCC
CGTTGACCATGAATGGAAGGGGCAAGACAACGTCGGAGCTTTCGGATCGG
TTAGATTTTCCACCGTCCTTTGGAGGAAGTCACGAGAACTTCAATACAAT
CAATGTTCGGAGGGAAAAGTCGGCGTGATAAAAAGCGAGTTTCATTTTCG
GTGCCCACCGACGAAGAATACGACTCATCTTCGATATCACTGCAGAAAAT
TTCCATGATTTGCAAAATCAAGTGGCACAACTTGAAAGAGAAAAAGATTC
CCTTCATAAATTATTAATGAGTACAGAATCACCTATCCCTGTAGGTGTAA
CAGAATCAAAAACATCTCCAAGGGATGCTCAAAACATGATGAATCTGGAA
ACAACTGATCCAGGCCAGATTCTAGGGAGTAATGGTATTTTACCTAATTC
GTCTTTGCTTGCCAGTGGTTTGGCTTTGCGCCCAGGAAGTATTACTCCTT
CGGACTCATTTATGATCGACTCCCAATATTATAATGATCGCATTAGATCG
TTGGAAAGTGAGAAATTAACCATTATGATTGAACACAACAACTTGATCAA
AGAGTTCAACAAAAGGATGGAATCACACATGGAAGAAATTAGGTCTTTAA
AAGACTCAAATATTCAATATGAAACAGAGCTGAAAGACTTGCAAGAATTA
TCTGTTTTCTTGGATGATGACCGTAAAAAATGTAGGAAACTTGCTAAAGA
ATGGCAACGGTTTGGGAGACATACTGTTGCTGTAATGAGAGCAGAAATGC
AAGGTTACCAGGACAAAATTAAAAACCTTGAAATTAAACAGCAAAAACTA
GTCAAAGAAAATACAGAACTTAGAGATCTATGTGTTTATCTTGATCAACA
GCGGTCAGGGGCAGGAATAGATGGCCAAAGTAATGGATTAAACTACTCTG
TTTGCCAAGAATGCACTCAGTTAAAGAAAGAGCATGGAACAATTCAAAGA
GGAAAAAGCTTATACAATCAAAGTTGCATCGACACAATCGAAACTTCGAT
CCAACAGTAATGCAAGTAACGCATCCAATTCAAGCTTAAACGCCTCCTTT
GACCAATCGCCTTTATCACCGCCACCCGCCCTTAATGAGGTTCCGCTCTA
TAAGCCCGCACCTCCTGCAGTTGCAACCAAACCTGCCATCCCTAGCAAAC
CTGCAATGACTTCCTCTAAAGAAGATCTTCTTACTGAAGACAACCCACAA
CCACTGAATTCTGTTACTGAGTCAGCAGAAAGTAAGAAGCCACAACAGAC
TGGACCACCACCACTGCCGAGCTATAACGAAATTATGAAAGATGTCGAAG
ATCGGACGCCTTCGACCGCCAAGGTTGAAGAGAAAGAAAGTGAAAGTGAA
ACTTGATTGTCGGACATTTCTCCGCGGAACAACGATTTGGCACGCCTTCA
TCACAACTCACTGTACCAACAAAACTCTTTGAATGAAGAAGAAATCAACG
AAATTCGAGAAAAATTGAGCCGAAGTACAACTGGAGATGCCACCTTGAGT
GAAAGAGAAATTGCCGTACTTAAAGATATGTGCCATGCGAGAATTCATTG
TCAAATGTACCAAGTATTTTACGAAATGGCTCATTCCCGTTGACCATGAA
TGGAAGGGGCAAGACAACGTCGGAGCTTTCGGATCGGTTAGATTTTCCAC
CGTCCTTTGGAGGAAGTCACGAGAACTTCAATACAATCAATGTTCGGAGG
GAAAAGTCGGCGTGATAAAAAGCGAGTTTCATTTTCGGTGCCCACCGACG
AAGAATACGACTCATCTTCGATATCACTGCAGAAAATTTCCATGATTTGC
AAAATCAAGTGGCACAACTTGAAAGAGAAAAAGATTCCCTTCATAAATTA
TTAATGAGTACAGAATCACCTATCCCTGTAGGTGTAACAGAATCAAAAAC
ATCTCCAAGGGATGCTCAAAACATGATGAATCTGGAAACAACTGATCCAG
GCCAGATTCTAGGGAGTAATGGTATTTTACCTAATTCGTCTTTGCTTGCC
AGTGGTTTGGCTTTGCGCCCAGGAAGTATTACTCCTTCGGACTCATTTAT
GATCGACTCCCAATATTATAATGATCGCATTAGATCGTTGGAAAGTGAGA
AATTAACCATTATGATTGAACACAACAACTTGATCAAAGAGTTCAACAAA
AGGATGGAATCACACATGGAAGAAATTAGGTCTTTAAAAGACTCAAATAT
TCAATATGAAACAGAGCTGAAAGACTTGCAAGAATTATCTGTTTTCTTGG
ATGATGACCGTAAAAAATGTAGGAAACTTGCTAAAGAATGGCAACGGTTT
GGGAGACATACTGTTGCTGTAATGAGAGCAGAAATGCAAGGTTACCAGGA
CAAAATTAAAAACCTTGAAATTAAACAGCAAAAACTAGTCAAAGAAAATA
CAGAACTTAGAGATCTATGTGTTTATCTTGATCAACAGCGGTCAGGGGCA
GGAATAGATGGCCAAAGTAATGGATTAAACTACTCTGTTTGCCAAGAATG
CACTCAGTTAAAGAAAGAGCATGGAACAATTCAAAGAGGAAAAAGCTTAT
ACAATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030491XLOC_030491Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047922-proteinTCONS_00047922-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047922-exon-scaffold_139-1575043694:450686..451724TCONS_00047922-exon-scaffold_139-1575043694:450686..451724Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1575043694:449833..449915TCONS_00047922-exon-scaffold_139-1575043694:449833..449915Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1575043694:449581..449661TCONS_00047922-exon-scaffold_139-1575043694:449581..449661Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1575043694:448328..448403TCONS_00047922-exon-scaffold_139-1575043694:448328..448403Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1575043694:447989..448065TCONS_00047922-exon-scaffold_139-1575043694:447989..448065Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1575043694:446457..446636TCONS_00047922-exon-scaffold_139-1575043694:446457..446636Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1575043694:444009..445727TCONS_00047922-exon-scaffold_139-1575043694:444009..445727Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:450686..451724TCONS_00047922-exon-scaffold_139-1510915933:450686..451724Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:449833..449915TCONS_00047922-exon-scaffold_139-1510915933:449833..449915Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:449581..449661TCONS_00047922-exon-scaffold_139-1510915933:449581..449661Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:448328..448403TCONS_00047922-exon-scaffold_139-1510915933:448328..448403Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:447989..448065TCONS_00047922-exon-scaffold_139-1510915933:447989..448065Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:446457..446636TCONS_00047922-exon-scaffold_139-1510915933:446457..446636Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1510915933:444009..445727TCONS_00047922-exon-scaffold_139-1510915933:444009..445727Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:450686..451724TCONS_00047922-exon-scaffold_139-1491911889:450686..451724Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:449833..449915TCONS_00047922-exon-scaffold_139-1491911889:449833..449915Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:449581..449661TCONS_00047922-exon-scaffold_139-1491911889:449581..449661Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:448328..448403TCONS_00047922-exon-scaffold_139-1491911889:448328..448403Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:447989..448065TCONS_00047922-exon-scaffold_139-1491911889:447989..448065Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:446457..446636TCONS_00047922-exon-scaffold_139-1491911889:446457..446636Clytia hemisphaericaexon
TCONS_00047922-exon-scaffold_139-1491911889:444009..445727TCONS_00047922-exon-scaffold_139-1491911889:444009..445727Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:444009..451724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.75093 7.91172 5.20113 3.93204 24.0356 17.8567 15.108 16.7663 9.19409 10.8414 8.32216 8.49831 16.0308 13.716 7.75273 8.28587 12.5555 13.9626 14.0947 13.0339 15.6968 17.6876 11.6048 14.2454 18.1516 18.8949 13.7668 10.2264 18.3572 22.1803
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019359CCDC85
Blast
BLAST of TCONS_00047922 vs. Swiss-Prot (Human)
Match: CC85A (Coiled-coil domain-containing protein 85A OS=Homo sapiens GN=CCDC85A PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 5.783e-34
Identity = 64/141 (45.39%), Postives = 105/141 (74.47%), Query Frame = 1
Query:  559 IRSLESEKLTIMIEHNNLIKEFNKRMESHMEEIRSLKDSNIQYETELKDLQELSVFLDDDRKKCRKLAKEWQRFGRHTVAVMRAEMQGYQDKIKNLEIKQQKLVKENTELRDLCVYLDQQRSGAGIDGQSNGLN--YSVCQ 975
            +R  E+EK++ M++H+NLI+E N+R++ H+ EIR LKD N + + + ++L++L  FLDDDR+K +++++EWQR GR+T  VM  E+  Y  K+K+LE+KQ+++VKEN EL++LCV LD+++ GAG  G    ++   S+CQ
Sbjct:   56 LRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKDLEVKQEEVVKENMELKELCVLLDEEK-GAGCAGSRCSIDSQASLCQ 195          
The following BLAST results are available for this feature:
BLAST of TCONS_00047922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC85A5.783e-3445.39Coiled-coil domain-containing protein 85A OS=Homo ... [more]
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