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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048029 ID=TCONS_00048029|Name=TCONS_00048029|organism=Clytia hemisphaerica|type=transcript|length=997bp
AGTTTAAGACATGGAAAAAAGATCATGACATTGAAAGTTTCACTAATATT
ACTGATGACGAGTTGGACAATATAATTTCTGAAATACTAGAGGCATCCCC
TAATTCTGGTGAAAGGATGGTAGTTGGATCACTTCAAGCAAGGGGTCAAA
TTATTGAGAGGGCAAAGGCACCTTGATGGGAACCATAAACTTATTAGGTG
GCGTTTTGTGATTCATGGGTGCATAGATGGGTTTTCGCGCACCATAGTTT
TCCTGAAATGTTCAACTAATAACAAATCAATTACTGTCTTAGAAAACTTT
TTGGAATCCATCCTTGAATTTCGCTGCCCTTTGCGTATTAGAACTGATCA
TGGTTTAGAGAATATTAAAGTCGCTGAATGGATGCTAGACCACCATGGAT
TGGAAAATAATCCCGTATTAACTGGAAGATCTGTCCATAACCAAAGGATC
GAACGACTTTGGTTGGATGTGAAGTTAAAAGTTAATTGTATATTTATTGA
TTTATTTCGTAACTTTGAAGAAGATGGTTTATTAGACCCAGCCAATGAGG
TTCACTTGTTTGCCCTTCAATACATTTTTTGTCCTCGCATCAACAAAAAG
CTACAAGAGTTCATGTCAAGTTGGAACAATCATCCTATCCGAACTGAAAA
AACTCAACACCGTTACAGCTCTGGATTGAAGGAATCTATAAAAGCTTTGA
GGATGGCATTCTTGAACGAACAAATGTTGATGTAGATGAGGACTATGGTG
TAGATGGTGATGAATCAGATAATGATGATGAAGATGAAGAACAATACACA
GTTGAAGTGCCACAAATTCTTCTTGGTTTGGATGAGAATCAACAAAATTT
TGTTACCTCTATAGATCCACTTCAAGATGATGGCGAAGAGGGAAGATCCT
TATTTCAAAGATTAGTAAACTTTCTTGAATCGTAGATCAACGTAGGAACA
AGAATTAAAATTGTGACATTTGTTTACCTTAAAGGAAGAAATTTTGG Run BLAST on NCBI transcript from alignment at scaffold_14:91460..92777- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048029 ID=TCONS_00048029|Name=TCONS_00048029|organism=Clytia hemisphaerica|type=transcript|length=1318bp|location=Sequence derived from alignment at scaffold_14:91460..92777- (Clytia hemisphaerica)
AGTTTAAGACATGGAAAAAAGATCATGACATTGAAAGTTTCACTAATATT
ACTGATGACGAGTTGGACAATATAATTTCTGAAATACTAGAGGCATCCCC
TAATTCTGGTGAAAGGATGGTAGTTGGATCACTTCAAGCAAGGGGTCAAA
TTATTGAGAGGGCAAAGGTTCGCGAATCTTTAACGCGTGTGAACCCAGAA
AGAAATTCACTTAACAAAAGAATAAAAAGAAGAGTTTACAGTGTTCCATT
CCCAAATGCATTATAGTAAATTCTATTTATCAAGACTTTGGTTCCTTTCC
AGCATTTTTCTTTCAAGTATTCACTCTGTTCCTTGACCTTTTCAAAGCCC
ATTCTTGTTATATGGAATACCTGCCTATTTGAACATCCATCGTGTACTTC
TTTTAGTCTCTGCTTAAGTTTAAGATATTTGGTCATTAAAAGTCAACTGT
ATAATTTGATCTTAAAACTTCTCTTTTATCTCCTCCAGGCACCTTGATGG
GAACCATAAACTTATTAGGTGGCGTTTTGTGATTCATGGGTGCATAGATG
GGTTTTCGCGCACCATAGTTTTCCTGAAATGTTCAACTAATAACAAATCA
ATTACTGTCTTAGAAAACTTTTTGGAATCCATCCTTGAATTTCGCTGCCC
TTTGCGTATTAGAACTGATCATGGTTTAGAGAATATTAAAGTCGCTGAAT
GGATGCTAGACCACCATGGATTGGAAAATAATCCCGTATTAACTGGAAGA
TCTGTCCATAACCAAAGGATCGAACGACTTTGGTTGGATGTGAAGTTAAA
AGTTAATTGTATATTTATTGATTTATTTCGTAACTTTGAAGAAGATGGTT
TATTAGACCCAGCCAATGAGGTTCACTTGTTTGCCCTTCAATACATTTTT
TGTCCTCGCATCAACAAAAAGCTACAAGAGTTCATGTCAAGTTGGAACAA
TCATCCTATCCGAACTGAAAAAACTCAACACCGTTACAGCTCTGGATTGA
AGGAATCTATAAAAGCTTTGAGGATGGCATTCTTGAACGAACAAATGTTG
ATGTAGATGAGGACTATGGTGTAGATGGTGATGAATCAGATAATGATGAT
GAAGATGAAGAACAATACACAGTTGAAGTGCCACAAATTCTTCTTGGTTT
GGATGAGAATCAACAAAATTTTGTTACCTCTATAGATCCACTTCAAGATG
ATGGCGAAGAGGGAAGATCCTTATTTCAAAGATTAGTAAACTTTCTTGAA
TCGTAGATCAACGTAGGAACAAGAATTAAAATTGTGACATTTGTTTACCT
TAAAGGAAGAAATTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048029-exon-scaffold_14-1575043694:92611..92777 | TCONS_00048029-exon-scaffold_14-1575043694:92611..92777 | Clytia hemisphaerica | exon |
| TCONS_00048029-exon-scaffold_14-1575043694:91460..92289 | TCONS_00048029-exon-scaffold_14-1575043694:91460..92289 | Clytia hemisphaerica | exon |
| TCONS_00048029-exon-scaffold_14-1510915933:92611..92777 | TCONS_00048029-exon-scaffold_14-1510915933:92611..92777 | Clytia hemisphaerica | exon |
| TCONS_00048029-exon-scaffold_14-1510915933:91460..92289 | TCONS_00048029-exon-scaffold_14-1510915933:91460..92289 | Clytia hemisphaerica | exon |
| TCONS_00048029-exon-scaffold_14-1491911889:92611..92777 | TCONS_00048029-exon-scaffold_14-1491911889:92611..92777 | Clytia hemisphaerica | exon |
| TCONS_00048029-exon-scaffold_14-1491911889:91460..92289 | TCONS_00048029-exon-scaffold_14-1491911889:91460..92289 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:91460..92777 - |
Blast
The following BLAST results are available for this feature:
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