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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048065 ID=TCONS_00048065|Name=TCONS_00048065|organism=Clytia hemisphaerica|type=transcript|length=932bp
CTTTCAGCAAAAATTCAAACCTTCTGTCGAGGTCAGGTTTATGGTTAAGA
ACTTCAAAAGGAACTTTTGATCCAAACTTGAGCTCAAGCAGACCACTGGA
ACGAATTTAGTTTAATTTGGGCACATAACATTCTCAACCTTTTCAAAACC
AACAATAGTTTTGGGGCCTTCCATACAGTAACTGCGCTTCAAAACCCATG
CAAAAAAGTTCGGGCGTAACACAACCATGAAGTTTTAGGGTACTGAAACT
GTGAAAGACAGTTTTGCAAACGTTGGACCCCGTTATGCTATGAAGATGAT
TTTTTCAGGTAAAACTCCTCATATTCAAGCAAATCGACATAAAAATattc
tggctgaaaaaaattgatttcgaaCCCCCACGAAGGAGGGAAGTTGTCCC
AGAAGCTAACTTTGAGCAATGATTACTCAAAAGGTAATAGTTCAATGATA
ATGAAATCTACCACAGACCTGTAATAGACTGTTTtatatgaacttgcaaa
atttcagaaaagtgGCCTTTTTGCCACTGCAAATATGCTACAacgaatat
ttttttaactttgtaatttttcacgTAACCAGAAGTGGTCTGCATGGAGT
CCCCTAGACACTCTCGCTATTTTCTAGGCGTACACCCCTCCTAGGACTTT
CTTTGTGTCAAATTTAAGCGTACTGGCTAATCTAAAAGGTTAACACTTAG
CCTTGTGATGAGTGCAATAAGCGCAATTTTGGAAATCGGAAAAAATCGTC
CCAAATTTTAGCAACAATTCAGATTTTTAATTTGGTCAGGGTTACGAATA
TGCACTTCAAAAGATACCTTCTGTCCAAATTTGAGCTCAAACAGACAact
gtaaagaaaaatatttttttgggcaaTTGACAACCATTTTAGGCAGATAG
CAatcattgaaaaatttcaaaaccatTTAACA Run BLAST on NCBI transcript from alignment at scaffold_14:133771..134702 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048065 ID=TCONS_00048065|Name=TCONS_00048065|organism=Clytia hemisphaerica|type=transcript|length=932bp|location=Sequence derived from alignment at scaffold_14:133771..134702 (Clytia hemisphaerica)
TGTTAAatggttttgaaatttttcaatgatTGCTATCTGCCTAAAATGGT
TGTCAAttgcccaaaaaaatatttttctttacagtTGTCTGTTTGAGCTC
AAATTTGGACAGAAGGTATCTTTTGAAGTGCATATTCGTAACCCTGACCA
AATTAAAAATCTGAATTGTTGCTAAAATTTGGGACGATTTTTTCCGATTT
CCAAAATTGCGCTTATTGCACTCATCACAAGGCTAAGTGTTAACCTTTTA
GATTAGCCAGTACGCTTAAATTTGACACAAAGAAAGTCCTAGGAGGGGTG
TACGCCTAGAAAATAGCGAGAGTGTCTAGGGGACTCCATGCAGACCACTT
CTGGTTAcgtgaaaaattacaaagttaaaaaaatattcgtTGTAGCATAT
TTGCAGTGGCAAAAAGGCcacttttctgaaattttgcaagttcatataAA
ACAGTCTATTACAGGTCTGTGGTAGATTTCATTATCATTGAACTATTACC
TTTTGAGTAATCATTGCTCAAAGTTAGCTTCTGGGACAACTTCCCTCCTT
CGTGGGGGttcgaaatcaatttttttcagccagaatATTTTTATGTCGAT
TTGCTTGAATATGAGGAGTTTTACCTGAAAAAATCATCTTCATAGCATAA
CGGGGTCCAACGTTTGCAAAACTGTCTTTCACAGTTTCAGTACCCTAAAA
CTTCATGGTTGTGTTACGCCCGAACTTTTTTGCATGGGTTTTGAAGCGCA
GTTACTGTATGGAAGGCCCCAAAACTATTGTTGGTTTTGAAAAGGTTGAG
AATGTTATGTGCCCAAATTAAACTAAATTCGTTCCAGTGGTCTGCTTGAG
CTCAAGTTTGGATCAAAAGTTCCTTTTGAAGTTCTTAACCATAAACCTGA
CCTCGACAGAAGGTTTGAATTTTTGCTGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048065-exon-scaffold_14-1491911889:133771..134702 | TCONS_00048065-exon-scaffold_14-1491911889:133771..134702 | Clytia hemisphaerica | exon |
| TCONS_00048065-exon-scaffold_14-1510915933:133771..134702 | TCONS_00048065-exon-scaffold_14-1510915933:133771..134702 | Clytia hemisphaerica | exon |
| TCONS_00048065-exon-scaffold_14-1575043694:133771..134702 | TCONS_00048065-exon-scaffold_14-1575043694:133771..134702 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:133771..134702 . |
Blast
The following BLAST results are available for this feature:
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