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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048031 ID=TCONS_00048031|Name=TCONS_00048031|organism=Clytia hemisphaerica|type=transcript|length=218bp
ATTCATTGTAAATTACGACCGTGTCTAAGATTATTTGAAACTTGTGTATC
CAACCAAAAAGAAACAAGATTTGaaAGATTCTGATTACGTATGTGGAGGA
AAATGGACCGCTGCAAAGAATATTGGTCGGAGAAAAGGAAAGCTTGATGA
AACTGGGCTAGAGGTGGGAACATGTCGCCATAGATTGGGACAAAAAGGCT
TAAACATGAAACAGGGTG Run BLAST on NCBI transcript from alignment at scaffold_14:198706..199627- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048031 ID=TCONS_00048031|Name=TCONS_00048031|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at scaffold_14:198706..199627- (Clytia hemisphaerica)
ATTCATTGTAAATTACGACCGTGTCTAAGATTATTTGAAACTTGTGTATC
CAACCAAAAAGAAACAAGATTTGGTAAGTATCTGACCAAACTGTTATATA
CATTACCTAAAGTAATCCAGCATTCATAAGATATAAAGGCTCATGTACCA
ATTATTTTGAACATGTTTGAACGTAGATGCAATCTTTTTGGTATTTTAGA
AAGATTCTGATTACGTATGTGGAGGAAAATGGACCGCTGCAAAGAATATT
GGTCGGAGAAAAGGAAAGCTTGATGAAACTGGGCTAGAGGTAAAACTACC
TGTATAAAAATATTTATCAGAAAATGACCTCAAATTAAATTCTATAAAAG
GGGTAGTTTGGTCAAAAAACCTTTTTTTCTTCTCTTTTCCAAAAGAGACA
CAAAAATATATACAAACAAAGATATATTGTTGTTAAAAAATGTCCTTGTC
TTTAAAAAACCCCTTTTCTTTTGTAATTTTTAAACATATCCTTTACACGT
CACAGTTGCAATGAAAATTAGATTATAATGTGTTTACTCAAGCAGACTAT
ACTCATACTTATATGAAAATTTTATGAAAAGTCGTAAGAGCGGCAAAAAG
AAACACAAATAGCCAAGACAGTTGTAGATTAAAAACAGGGAAAGTAACCC
TAAATCTTTGGGCTAGGTTCTCTTTTATTCAACCACAACGTCACATACAT
AAAGTGAGCTAAAAAAGATGGGTCTTTCGGTCGATATCAAAAAATAAAAT
ATTATAATAATGGAGACGCTTCCTTCGTTTGAGCGAATTTTGTTCGCGTT
TAAAAGAACTATCCCTTTAATATTTACTTTTTGAGATAATGATCAAAATC
ATTTGTACCGTTTATAGGTGGGAACATGTCGCCATAGATTGGGACAAAAA
GGCTTAAACATGAAACAGGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048031-exon-scaffold_14-1575043694:199555..199627 | TCONS_00048031-exon-scaffold_14-1575043694:199555..199627 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1575043694:199339..199428 | TCONS_00048031-exon-scaffold_14-1575043694:199339..199428 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1575043694:198706..198760 | TCONS_00048031-exon-scaffold_14-1575043694:198706..198760 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1510915933:199555..199627 | TCONS_00048031-exon-scaffold_14-1510915933:199555..199627 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1510915933:199339..199428 | TCONS_00048031-exon-scaffold_14-1510915933:199339..199428 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1510915933:198706..198760 | TCONS_00048031-exon-scaffold_14-1510915933:198706..198760 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1491911889:199555..199627 | TCONS_00048031-exon-scaffold_14-1491911889:199555..199627 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1491911889:199339..199428 | TCONS_00048031-exon-scaffold_14-1491911889:199339..199428 | Clytia hemisphaerica | exon |
| TCONS_00048031-exon-scaffold_14-1491911889:198706..198760 | TCONS_00048031-exon-scaffold_14-1491911889:198706..198760 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:198706..199627 - |
Blast
The following BLAST results are available for this feature:
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