TCONS_00048035 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048035
Unique NameTCONS_00048035
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length741

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048035 ID=TCONS_00048035|Name=TCONS_00048035|organism=Clytia hemisphaerica|type=transcript|length=741bp
aaaattgtgaaatcAGTAACATTTAAGAATAATTTCAGCGCTAAAATACA
TGAACATGCGATTTATTAATAAAAAAAAGCTTGTCAATTTCTTTCatgtc
tctctctctctttagGTGATCCAGAAATGCTTTACGAATCAGTTCActca
aaaattttcttgctgccggaagattttcatttataccCAGCTCACGATTA
TAAAGGACATCACGTGACCACAGTCGCcgaagaaaaatctttgaatcCTC
GATTgaccaaaacaaaagaagaatttgTTCAACTTATGAAAAACCTTGGT
CTCGCCTACCCGAAAAAGATTGATGAAGCTGTTCCTTGGAATATGAAATG
TGGACCAAGTCAGTTAGGTCAATTACGTATGGATGGTGGTGAATAAATTA
TGCAAAGAATGTTAATTATGTACCGATAATGTTTTGCAATGAAGTAGGAA
GTACAGCGATTTCTATTGTGATATTTACTTCCTTTCCTAGAAAACGGTTC
TAAATTAATTATCGTTTCGAATAATTATGATTGAACTTTACTACCTACAT
ACAGTAGAATCATGAAGTTAATAAAGATAggtggagagtcaatgcctttt
gttctattctgatttatcatcggaagcaaacagctgtttggttgctttgg
gaataagatgattaattatgggtatactcgtgggaatatttaagataaat
gaaaagacattacatttttaacaagtatcttgaaatataat
Run BLAST on NCBI

transcript from alignment at scaffold_14:470817..486930-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048035 ID=TCONS_00048035|Name=TCONS_00048035|organism=Clytia hemisphaerica|type=transcript|length=16114bp|location=Sequence derived from alignment at scaffold_14:470817..486930- (Clytia hemisphaerica)
AAAATTGTGAAATCAGTAACATTTAAGAATAATTTCAGCGCTAAAATACA TGAACATGCGATTTATTAATAAAAAAAAGCTTGTCAATTTCTTTCATGTC TCTCTCTCTCTTTAGGTGATCCAGAAATGCTTTACGAATCAGTTCACTCA AAAATTTTCTTGCTGCCGGAAGATTTTCATTTATACCCAGCTCACGATTA TAAAGGTATGGCAAAAGACTTATGGGGCTTTTTTTGTCACTAATCTCTTA ACAGTTACTTTATGTTTTGAATTCTGGAATTAAACTTATATGTCTTATAT ACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATATTAACCTCTGAAG ACCAATAATAAAATTTTTATCGCGCATGTGTCAATCTAATCAATGTAGAA GAAATCAAAGTTAATTGAATCGAAATAATTGACAGACTTTATGTTATGAT TCTCTATCACTGACTCTTTTTACAAAGCATTAATGACTTTTTAAGTTTTC AACGACGGGAATAAAAATATCAACTTTGAACTTCATCCAAGATCTTGGAT GGTCGTCATGGTTACTTTTGTCTTCGTTGATTGCGCGCTGAATAGAATCT CGATTCGTCGGCACAGCGTCAATATATGATTTTGACCTGTGCTATTCACG GTATGTCTTATATGTTTTAAAAACCCGGAGGGGGGATACTTAGGCAAATG GAGAGTACGGTATGTGCCACCCTTTAGGGTACCTTTTTTGGAAAGTCAAA TTTCAGTCCCACTAAGGGTCGGAAAAATAGGAAAATTTCAACTTTTTACC CCCGGAAAGATCGATATTTGGTCAGAAACGGTCAAATTAGTCCCGCCAAG GGTCGTCAAATTCCCAAAATTTTCCTTTGTTTTTTCCTTTTTAGTTCCGG TAAGGGTTCAAAGATAGGTCAGGCGGCACCCCCTGTCAGCTCGCAACCCT AGTACCCCCGGGTTTAAAAATCAGAACGTTGTTGTGCTCCTACTTTGACA TCTTTTTCAACCATTCTCTAAAAACTGAAAGATCTTTTCGCTACTTGAAG ATTTTTATTTACATGTTTTTTTATAAAAGCAAATGTCAGTTCCTATATGA GGCTTACATTATGCTTAGCATTCTATTGCTCTCAGACAATAGAACCATTG TTGTTTAGGTACAAAAAACTGAGCCTACGTATGCTTATAAACGTTATAAG GCCCCCTCCCCCAGCGGTTTGCGTGAATGTGTGAATGGGCATTTTCGGTT GCGTGAATGCGTGAAAATTGGGAAAAAAAATACGTGAATGCGTGAATTGA AAACATTTTCGTGAAAATTCACTTTTTGATTGCGTGAATACTTGAATTTT CCCTTTTTTCCACCGATCATGTACAGTTTTCCCAATTTTCAATGTTTTCC CCAATTTTTCCCGAAAATTTTCCAATTTCCTGCAAAATCGGGTTATTGCG TGAAACTCGAGGAATATTTGCGTAAATGCGTGAATTTCGAAAAATTTGCG TGATTGCGTGAATCGAGGGTCCGCTTGGGGGGGGGGCTCTTATAAAAGCT TATAAAAGAAAAAAAAAACATGTATATCCAGCTCATGATTGGGCTTTTCC AGAAAAAAAACGTGCACCCCCTGTTGAGGAGGTCCAACGTTTTGTGACCT ACCCCCTTGGAATTCCAGGCAATTTTAGGATCATACCCCTCTGGAATTCC GAATTTTTACAAATTTTCAATCATTACCCCTTTGGAATTCCGCTTATTTT TGACGGATTTTCGTCTACCCCTATGGAATTCCACTGCATTTCAAACCTTA CCCCCTTGGAACAGAAATGGACCTCCTCAACAGGGGGTGCACAATTTTTT TCTGGAAAAGCCCATTATAAAAGTAGGAAAATTACTTTTGAGAAAAAAGG GTTATGGTATTTACCTTGTTTATTTACCTTTTTTTCTCCAATCTTTTGGC AGACAATGACATCATCACCCTCATCAGTTACCCTTGTCAACATCATTAAC ATAACGTTTATAAAATGGTGGGTTGTGAATATGAATGATGTCATTTTCGA GTTTGGTAAGGTAGATGTTAGCAAGATGTTTCATTTTTCAATCTAACTTC TACCAACAATCAGATGGATGCACCATGGGTAGACCCTTATCAGTTACCCT TGCCAACATCTAGCTTACCAAACTCGACAGCATTCATATTCACAACCCAT ATTCACCATTAATTACAGTATTTCCCGATGTCTGATTAACGCACTCACCC CTCTGTTTAGTGATTTTTCTATTTCCGTAAACTCCCCCCTCCCCGTCAGA CCATATCAAAACACCCCCTACATGTTATTTATAAGAACAAACTATATAAG AAAATAAGGCCTCGATGGCCAAAATATTAAGAACAAGTTAATAACTTTTA AGTCTTTGCGAACTCTATAGAACACCAAATTTCAAAAAAAAATTGACAAA AATACTCAAAAATTGCAAAAGTAAAAACATGTTAAAAACATTTTTAGGCT TAAAACTCAAAAAGTTATGAACATCCCAAGGAGGCTTTGGATGTTCTTAT GAAAAAAAACGTGTATTTACTAACTTTTCGAAACTAAGACGGAAACCGTC AAAAGAAAAGTCCTTTTTTCTGCTCTAAATTGCTCGACTAAATTTACTTT AGTTTTGAGTATTCGTGATATTTCATTACGTAAGTGATGGTAAATTTTGA AAATACTTTTCTTGAACTTTGTGCGAGCAAAAACTAGGGTGTGTCTGTAA ATAACATTACACGCTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTTGTTTT TTTCCTTTTTAGTCCCAGTAAGGGTCCAAAGGTTGAAGGTCGGGCGGCAC CCCCTATCAGCTCGCAACCCTAAGTACCCCCCAGGTTTAAAGATCAGAAC GTTGTTGTGCTCCTACTTTGACATCTTTTTCAATCATTCTCTAAAAACTG AAAGATCTTTTCGCTACTGGAAGATTTTTATTTACATGTTTTTTTATATA AGCAAGTGTCAGTTCCTATATTTTATATAAGCAAGTGTCAGTTCCTATAT GAGGCTTACATTATGCTTAGCATTCTATTGCTCTCAGACAAAAAGCCATT GTTTAGGTACAAAAAACTGAGCCTATATATGCTTATAAACGTTATAAAAG CTTATAAAAGAAAAAAAAACATGTATATCCAGCTCATGATTATAAAAGTG CTTTTGAGAAAAAAGGGTTAAGGTATTTACCTTATTTACTTACTTTTTTT TCTCCAATCTTTTGGCAGACAATGACGTCATCACCCTCATCAGTTACCCT TGCCAACATCATTAACATAACGTTTATAAAATGGTGGGTTGTGAATATGA ATGATGTCATTTTCGAGTTTGGTAAGGTAGATGTTGGCAAGATGTTTCAT TTTCCAATCTAACTTCTACCGACACTCAGATGGATGCATCATGGGTAGAC CCTTATCAGTTACTCTTGCCAACATCTAGCTTACCAAACTCGAAAACGAC AGCATTCATATTCACAACCCATATTCACCATTCGTTACAGTATTTTCCGA TGTCTGATTAACGCACCCACCCCTCTGTTTAGTGATTTTTCTATTTCCGT AAACTCCCCCCTCCCCGTCAGACCATATCAAAACACCCCCTACATGTTAT TTATAAGAACAAACTATATAAGAAAATAAGGCCTCGATGGCCAAAATATT AAGAACAAGTTAATAACTTTTAAGTCTTTGCGAACTCTATAGAACACCAA ATTTCAAAAAAAAATTGACAAAAATACTCAAAAATTGCAAAAGTAAAAAC ATGTTAAAAACATTTTTAGGCTTAAAACTCAAAAAGTTATGAACATCCCA AGGAGGCTTTGGATGTTCTTATGAAAAAAAACGTGTATTTACTAACTTTT CGAAACTAAGACGGAAACCGTCAAAAGAAAAGTCCTTTTTTCTGCTCTAA ATTGCTCGACTAAATTTACTTTAGTTTTGAGTATTCGTGATATTTCATTA CGTAAGTGATGGTAAATTTTGAAAATACTTTTCTTGAACTTTGTGCGAGC AAAAACTAGGGTGTGTCTGTAAATAACATTACACGCTTTTTTTATAAGAA TACACTTTATAAGAATGTCCATAATGAAAATGGCTAAAAAATCAAGAATG ATGCTAAGAATATCACCATCATGGAATTTTGCTACTCAAGCTAAGAATGC CATTTTAAAGCGTTTTCATTTATAAATTGTCAATTACCCCACAAAAGGCT CTCTCCTTATTTCACAGAAATGCCATTTTATGCTTGAGACGTATATACTA AATGTTAAAATCTAGTCTGAATTAGGATTTTAACCTAAGAATGCTATAAG AATATTTTAGGATGATTTTCCCCAAAAAAAGTTAAAAATACACGCTGTAA ATCCATTTCATCATGGATATTCTTAACTTTTTTGTGAAAATCATCCTAAA GTATTCTTACAGTATTCTTAGGTCAGGATCCTAATTCAGACTAGATTTCA CATTTAGTACATACATCTCAAAATTCCATGATGGTGATATTCTTAGCATA TTCTTAATATTTTGGCCATTTTCATCATGAACATTCTTATAAAGTGTTTT TCGTACCTTGGAGAATTTCCCTTTTCTTCAAATATCACGACCTTGATTGG AGTGGCGCTGTGGGAAAATTTTTCTGGGGCCAAAGTCAATTTTTTTAAAT GTCCAAAATGATGAAATGAAACCCCCAATTTTCCAAAGTGGTGCCCCACC CACCAGTCTCAAAACTTTTACTTATTCATTTGCCTAGGCATAATGAGGAA GGGAATATTTAGTGGATAAGAGTAGATATATTTTTGATGTATGGAAAAGG GATAAACAGGCCCCACCATGACTAGAAAATCGACTGCCAAGACGCCCTAA ATCACTAAATAAAAATAGACAAATTTGATACTTGCTAGAGCGAAAAGAAA CTTAAAGAAACAATGTGTAATACGAGCGATGCGAGCAAAAAAGTTGATGT TTTATAATTTTCAATTGTTGTCAGCAAATTGGTCTTGGGGCGCAGTTAGA TTTTCATTTAATAATGCTATATTGCCGTACACAAAAAAACTAGTAAATTA GCTAGATTGCAAAGAAGTTACCAGTTAACTGTATTGCGATATCAAATCGG GCGAAAAAAATTGCAAGCATTTTAAAATTATCCCAGTAAAATTGGTCCTT GGGCGCAGTTTAAGGCGCATAAAGTATGATTTTTAAGATTGAAGCGTTCA AAAAAATCTCTTTTCGCGCCCCTTGCTCTTCGGCGCCCCTTCAAAAAAGC TCAGCTACCCCCCTGCCAAAACACCACTGCTTGACTGTAGTGTTTTATAT AAGATATTTGTGGACCGTAGACCGTTAACCGTTAACAAGAGACAAGATTA TAAAAAAACTAGCCTGTAAAATAGTTCACGGTTTGGATATCCAGGCTAGG CTAGAGGTTGATAAAATCAATAAATTTCTGAGCTTTTTCATGACCCACAG TTCAGGCGATTCTCGGACGAGAAATTTATACACGATTATAAACGATCCCT TATATTTAAACTAAAACATATCAATCTTATACAATTGGTGTCTCAGCTTT TTCTGGTATTTCCAAAAAAGGGTTTTTCCTCAGTGAAAACAAAGCAAAAA AATAGCTTTGATCTTTCAGCTGATAAAAAGGGTGTTGGAATTAAATCAGA GATGTCGACATTAGACCAAGTTACGGTACAATCGGTGATTCAGCTTTGTC TGGTATTTCCATACTATAAGGCGATACAATTTTCCAATCTACATAGTTAT GGGCTACCCCTTGCCATGCGTACGTATTCACAGGCGAGAATGTTCTATCT AGAAGCCTCCTAGTGTCAGGTGTTCTTGTACGCGCATATTTTGAATCACT AAAGCGGGAACATAAACTGTTGGTATCTTTATTTGTTAGTTTCTTGTTTC TCTCTATACTCCAGGGGAATAAGGCGGGTTCATGGAGGTCAAAATTCTTG CTACGTTACAAATTAAATAATTAATATGGAAGTTTGAATCACTGATTGAG AAAGGATTTTTCCTCAGTGACTACAAAGCAAAAAAATAGCTTTGATATCT TTCTATCAATTTCAGCTGATAAAAAGGGTGTCGGAATTAGTTCAGAGATG TCGATATTAGACCAAGTTACGGTACAATCGGTGATTCAGCTTTTTCTGGT ATTTCCATACTATAAGGCGACACAATTTTCCAATCTACATAGTTATGAGC AACCCCTTGCCATGCGTACGTATTCACAGGCGAGAATGTTCTATCTAAAA GCCTCCTAGTATCAGGTGTTCTTGTACGCGCATATTTTGGATCACTAAGA CGGGAACATAAACTGTTGATATCTTTGTTTGTTAGTTTCTTGTTTCTCTC TATATGTACTTTTCTGTTGATTTCACGTTCTTTCTTATGCTTTGGGGTAG ACATTCGATTTAAAAAATTCTCCATTTCTCCAAGCGTTTTTTGTGTGCCT CGGGCGGGTGTGGGCGAAGGGTGTCGATTCAAGGGGCGTGATACTCGAAG GTTTATTCGATTCAATTCATCTTCGCATTTTATCGAGTNCAAGGCGGGTT CGTGGAGGTCAAAATTCTTGCTACGTTACAAATTAAATAATTAATATGGA AGTTTGAATCACTGATTGAGAAAGGATTTTTCCTCAGTGACTACAAAGCA AAAAAATAGCTTGGATCTTTCTCTCAATTCCAGCTGATAAAAAGGGTGTT GGAATTAGATCAGAGATGTCGACATTAGACCAAGTTAAGGTACAATCGGT GATTCAGCTTTGTTTGGTATTTCCATACTATAAGGCGATACAATTTTCCA ATCTGCATAGTTATGGGCTACCCCTTGCCATGCGTACGTATTCACAGGCG AGAATGTTCTATCTAGAAGCCTCCTAGTGTCAGGTGTTCTTGTACGCGCA TATTTTGAATCACTAAAGCGGGAACATAAACTGTTGGTATCTTTATTTGT TAGTTTCTTGTTTCTCTCTATACTCCAGGGGAATAAGGCGGGTTCATGGA GGTCAAAATTCTTGCTACGTTACAAATTAAATAATTAATATGGAAGTTTG AATCACTGATTGAGAAAGGATTTTTCCTCAGTGACTACAAAGCAAAAAAA TAGCTTTGATATCTTTCTATCAATTTCAGCTGATAAAAAGGGTGTCGGAA TTAGTTCAGAGATGTCGATATTAGACCAAGTTACGGTACAATCGGTGATT CAGCTTTGTCTGGTATTTCCATACTATAAGGCGACACAATTTTCCAATCT ACATAGTTATGAGCAACCCCTTGCCATGCGTACGTATTCACAGGCGAGAA TGTTCTATCTAAAAGCCTCCTAGTGTCAGGTGTTCTTGTACGCGCATATC TTGGATCACTAAGACGGGAACATAAACTGTTGATATCTTTGTTTGTTAGT TTCTTGTTTCTCTCTATATGTACTTTTCTGTTGATTTCACGTNATCAGGT GTTCTTGTACGCGCATATTTTGGATCACTAAGACGGGAACATAAACTGTT GATATCTTTGTTTGTTAGTTTCTTGTTTCTCTCTATATGTACTTTTCTGT TGATTTCACGTTCTTTCTTATGCTTTGGGGTAGACATTCGATTTAAAAAA TTCTCCATTTCTCCAAGCGTTTTTTGTGTGCCTCGGGCGGGTGTGGGCGA AGGGTGTCGATTCAAGGGGCGTGATACTCGAAGGTTTATTCGATTCAATT CATCTTCGCATTTTATCGAGTTATTGTTCGATGATTTAATCGAATCGTAT CCGATTGATGTTTGCTGATGACGACTTAATCTATTCGAGATATCGATCAG TTCATCTTTCCGATATTTCCGTTTGTTTGTTTCAACCGAATGGTTTTGAT TATCGATTTTGTATCGGGTAGAATGTATGTTATAGACACCCTGTTTGGGG CGTGATAATCGATTGATTTGCGTTAAATTCATCTTTTTATTATTTCTTTA CTTCTATCTACTAAAAAGGAGAGAAGGAATGAGCATACATTCTGGGACAT TAGCATCTCAACTTTTTTAGGAAAATCATCCTAAAATATTCTTACAGCAT TCTAAGGTTAGGATACTAATTCAGACTAGATTTAACATTTAGTACATACG TCTCAAGCATAAAATGGCATTTTTGTGAAAGGAGTGAGCCTTACTTAGGC GTAATTGACAATTTATATTTAAAAATATTCTAAAAATGCCATTCTTAGCT TGAATAGCAAAATTCCATGATGGTGATATACTTAGCATTATTCTTAATTT TTTGGCCATTCTCATCATGGACATTCTTATAAAGTGTATTCTTATGAAAA GCGTGTATGCAGAAAATAATGTTGAAGGGACAAAGTCTAATTTATATAAA CTGATATTATCCCGTTACGAGATTATTATAAATTTATACTACACCAATGT TACTGTATTACAAACTATATAAGAACATAAGCTTCTATGGCCAAAATGTT AAGAACAAGTTAAGAACATTTTAAGGCTTTGTTGACTCTAAAACACCTGA TTTCTTAGGAAAATAGACAAAAATGCTCACAAAATAGTGAAATTAAGAAC ATGTTAAGAACATTTTTAGACTTAAAACTAAAAAAACTAAGAACATCCAA GGCTTCAAAACTGTTGGTTGTTCTTACAAAAAAACCTTTATGGCGTCATC AAAATGGATTTTGTTAAAGCTTTTTCTTTGTCGTTAAGAAGCCATTCACA AATCAAAATATCCAATAGTTCCATTTATACTGACAGAAAAACAGAAGACA GAAAAATCGTCTGAAACGAGAAGTTTGTAAAATGTGATCTGTGGAGGAGA TCCGATTTATTAAAACATGAATGGAAAGTACACTCTTCCATAATGCTCAT TTTCTAAATTGCTCATCTCAATTAATCGTGTCAGTATAAATAGAACCAAT GAAATAAAGTGGAAGTACTACCAAGATCGCAATCGCTCACCCGAAAGGGA TAATTAGTTGGTTTAAAATATTTACCGTGAAGTGGGGTAACTTGCATCTG TGGAGAAAAAACTTGTATAGCCATCAAACGACTGACCAATCAAAGCAGCA AGATTTCAAAACAAATGAACTACACAGCTCCGCTTGCAGCTCTACTCTAC CATTTTTGTTTTGATTTAATTTTGTATTTTATTAACCATAATCATTCATT TGAGGGCTATGCATGCTAGCCTCCACTAATGCAAGTTACCCAATCTCGTT GATTACAGAAACCTTCTGGGGCCTCTCCTTCTTTAGTAAAACCTTAAAGT ATTTTTGTGTAACAATTTTCCAGAATCGAGATATCAAAATTTGAAATTTC TGAAAATAGGTTCTTACACGGCTCTTACGTTGAGATTAAATTCCATCCTA AAAGCCGAAAAAATGTAATTTAAATATCTCAACTTTGGAAATTAGTTAAG NATCTCTGATTACCCGGGAAACAAGACAGTCGCATTATCTTTATCCCAGC TGGCACGCAACGTTGTTTCAACGTTTATCTAATGTTCACAACGTCCATTT AACGTTAGATTAACGTTGAAACAACGTTGTGTGCCAGCTGGGATACAAGA TGAACGGAAATGGTATGATCGTTGAGTAGATATATTTCATTTATATACAT GTTTATTTTTATAAGAACAAACTACATACACGCCTTTTTTATAACAATGG TGTTTTTTCATTTCATCATGGATATTCTTAACTTTTTGGCGAAAATCATC CAAAAATATTCTTACGGTATTCTTAGGTTAAGATCGAAATTGGCGAAACC GCTTATAAATTTTGCGGCCTATTCAAGAAATTTTTTGACTTTTTCAAGAC TTTTTTTTATACTTTCATTTGACATTTTGACTTTTTTCTAAGAGTTTTTG ACTTTTTCTTTGACTAATTGACTTTTTTTACTTTTTGAAGAGGTGTACGA TAATTTTTCGAGTGATTTACCCCTCGGATAATTGCATTGTCATGAAAATT TGCGCTCCTCCCATTTACGCTACTAAAGATATAGAACTCTCGATTGATTC TCAAGACTACATTTTTGAGTTGTAGATTAATGATTTGCCTGAGCTCTCAA AATTTTGAGTTTGAATAGAATTCGTTAAATTTATTTTGGGAAAGTATCCT TTTTTACGTTCACTATTACGCTATATTTGATATTTTAGCCAAGTAAACAA GGACTTTTAAAAACAGTCTTTCGATTGTTTTCACGGGGTCCACAAACCGA CCGCTAGTCTATCCATGAATTGTACAGATCATTTGAAGGAGCGGGGTTTC GAACTTCGATTTTCTGGTTTGCCACGCTGACCCATTTGACCACTTGTTCA TCGCTCCCACAGATCTGTAAAGCCCGAAGGGCTAGATTTGCGGCCTTTAT CGAAAAGTATAGCAAGTTTTGGTAGGATTTCCTACCAAAGAAATCACGTG ACAACAAGCAATTTCACTGGTTTGGGAGATGCGAAATAGCGTTTGCCGCC TAATTTTTTTGATCTCGCGCTCTGAAAACAATTAAACTGCTAGATCCTAT CCATCGGCACGAAATAAAAAAAAAATTTTGCTTCACTTTTTTTTGCTGGA GAAAGCTTAAAGTTGCCTATCTAGCCCTTCGGGCTTTACAGATACCTGTG ATCGCTCCTGCTTTATACAATAAAAATGGGGCTCATTGAGGTGCAAAGAA GAACTTGTCCTTGTGTACTGTTGTGCCATTCTTTCTGGGGTGTGATAAGA GACTTTGAGGTTTTTTAGTGATCCTGATTAGTTTAATATGATGTAATCTT TCTTTGTTGTTGACCAATAAGAACCTTTTATTTCCCATCAGGACATCACG TGACCACAGTCGCCGAAGAAAAATCTTTGAATCCTCGATTGACCAAAACA AAAGAAGAATTTGTTCAACTTATGAAAAACCTTGGTCTCGCCTACCCGAA AAAGATTGGTATGAAACTTGTATACTGTAAAGCTTTCTTTACTTAAGAAT TGTTAGATAATGTTTTTTTAGCGCAGCTCAATCGTCGCTGCTACTGAGGA TAGATTATATTGACAGATTTTGGTTGGCAAAGTTTTTGTTTTCGTTTATC AAGTGAACGTTATCTGCTCTGGGACTTCCTCTCACACGCCAAATGAAATG AGTTTCTAATGTTTCATAAAGGTCAATAGACCTGCGAAATATATTGCTAT AAAAGATTTCACTTCCAGCTCTACCCAGGCGCAATCCATGTTCCACATGA ACCCGTAGCTCAATGGTAGAGCAAACGCCTGCGAATGGTCTAGTCTCACC GGATCCGTTGGCTGGTCAGAACCGAGATTCAGAACTTTTCGAGTTTCAAG CCTAAAAATGTTTTTAACATGTTCTTATTCTCAGCATTGTTTTGAGTACT TTCGTACATTTTGCTAAGAAAACAGATGTTTTAAAATCTACAAAGATTTC AAATATTCTTAACTTGTTCTTAAGATTTTGGTCACAGAAGCCTTATGTTC TTATAGAGTGTGTTCTTATAGAAAAAACGTGTAAAGCAATAATGGCTGGT CGACCGTAAAAGACTTTGGGGGAGGGGTACTAGGTTTGCGAGGTGACGGG TATGTCCAGCTAAAATCGAAAATTGACCCTCTGAGGGAAACCATCTTGAT TTTTTGGGACCCTTTAGAGAATTTTTTCCCCCAAAAATCTTTGTCGACGT TTCACCAAATTCGGTCAAAACATGATGACCCTTTAAGAAGGAAATTTTCG ATTTTAGTGATTTTGGAGAACCTTTCAAGGGACTTAACTTTAAGTTTGTA CCTCATTGAGAGATTTTTTAAGTATGAAAAAACATGAACTTGTCACCTGC TTTCACAAGCATCCCTCAGGTTTCACAAGTTCGGCCTACATTTAACCTCG GGAGGCACATATCTCTGGACCTGTGTTTAAATATTGCGAGAAAAGGTACC CTTCTTAGGGAAAATATTTCCTAACCTTAGAGAGATTTCTCAGAAATTTT TATGGTTTTAATACCTAATAGCCGGAGGGTTTTGAATAAGCAGGGGTGGA TTAAAAATGGTGGAAAATTCTCGAAAAGGAGGCTAATACAGCAGAATTAG GGCGAAATAGGGAACTTTCAAAAAAGATTTCCCGAAAATCAATAAGCGGG GGGGGGGTTGGATTAGAATATCCTTGGTAAATTTTTTTTGAAATATTAAT TAGCGGGGCCCCCGGCTATTAGATAGCCGAGAGTACCTCAAAAGGGGATG GTGTTAAAGCAGTGTTCATTTTTCCTTGAAAAAAAACTGACTTTACAATT AATTTCTTGACGACCGAAGTTTGTCATGTGTGGGTAGGCCCGTCGTTACA CGCTTTTTTAGAAGAATGGTGTAAATCCATTTCATCATGTATATTCTTAA CTTTTTTGGTGAAATCTTCCTAAAATATTTTTACAGCATTCTTAAGTTAG GATCCTAATTCAGACTAGATTTGGCATTTAGTACATATGCGTCTCAAGTA GGAAATGGCATCTTTTTGAAAAGGAGTGAGCCTTACTTTGGGGCAATCGA CAATTTATAATTGAAAGTGCTTTAAAAAATGGCATTCTTACAATCAAAGT CATAATATTTAAGAAAAAAGGGAAATTCCCACGAAATCTTTCAACCACAA ACGATTTGGAAGCGCTCTAAATTAAAGTCTATTCACGATAAGTATACACT CTTTTTTCTTTTACCTATAACCTTTGAAGGAATTCTTCAATTTTTCCAAA TTTGTTATCTTTGGATACCCCGAAGGGCTAGATATTGTATTGTGCTTTTG CTAAAAAGTATGCCGAGGTTAGGTAGGAAATCCTACCTAAGTAACGTGAT ATTACAATAGAATTTCAGCGCTTGACCAATTAGAAGTTTCGCGGGTTTTC GAAAAAATTAGCAGTAATATTTTTTGCGATATTCACTTCTTTTGCTTGGA GGAGCTTAAAGCGCTCCATCTAGCCCTTCGGGCTTTATACATCTTTATAC ATCTCGCGTTACAAAGATAATCCAAAAGTCTCCAATACAATTGTGTTTGT TTTTTGTTTGGATCTTGTGTACTGATAAGGAGGAAAATTTGAGATCTCTT GAGTCATCAAGTGTTACTTTTAAAAAAAGAGTACAATTTTTTGAGTTTCT CTGGGAATAAAATACCATAGCAATTTTTTGAAAACTAGGTAAACGTTGAT CGTGACGTAATGTATGAAAAGGTTTATTGCAAACAAAAGAAATGATCACT TCAAAAACAACAATAGAGAAGTTATTTTCGCGTTGGTGCAATGTAACATG CTCTATCCCACCAACCTGAAACGCTTCCTCGTCTTTCCATCGACAACACT TATGGTCACTTATTAATAACATTTGTGTGTCTCACTTTTATTTGTAGAAA GAAAAATAGGGTGGAGACACGAGAAAGCGTTTCAGATTGGTGGGATGGAG CATGTTGTATTGCATCCTGAGGGGGGGGGGTACTAGGGTTGCAAGCTGAC GGGGGAGTGCCGCCTTTCGACCCTCGGACCCTTACCGGGACTAAAAGGAG AAAGAAAAACGGAAAGTTTTGTGAATTTTTCGACCCTTACTGGGACAATT TAACCAATTTTGGCCAAATTTTGATCTTTCTGGGGGTAAAAAGTGGAAAT CCAAAAAAGGTACCCTTAAGGACGGCACTTAGCGTACCCTCCATTTGCCT AGGCATTGCACCAACGCGAAAACAACTTCTTGTGTCCCCAAGCCTTAAAC CCTTCTTTATTGAGAGAGAAGAGAAATACACGTTGGTTCTATTTGCTTGA CTATCGAAAACAGCCGGCGAGGAGACCTTTTTTCCGATGTGTTCTGATGA GTATGTTTCAGATGGTTTCAGCTAGGAATTTCGATCTGTTCTGACGAGAC ANCTTTTTTTCCGATGTGTTCTGAGAGTATGTTTCAGCTAGAAATTTTGA TCTGTTCTAATAAGATCTTCGAAAATTAATCAGCTAGAAATAATGATGTG TTCTGACGAGACAGGAATATAAAGGTCATCAAACGTATCTTACAAGTATA TCTTGGCAAAATGTTTTTCCTAGATTTCAGAACACATCCAACCATAAGGT AGTACTAAGTTGAGCGATACAAATAGTGCCATGAAGGTTTCCTAGAAATC AGAACACATCATTTGTATAAGAAAATTGAAGGTTATAACATCCTGGGGGT CTCCTAGAAGATAAGAACACATATTTCTTAAAAATCTCTCTGCCGGCTGC TTCTGGACTATAAACTAAAACCTTACAAATTTCTTTTTTCTACAGATGAA GCTGTTCCTTGGAATATGAAATGTGGACCAAGTCAGTTAGGTCAATTACG TATGGATGGTGGTGAATAAATTATGCAAAGAATGTTAATTATGTACCGAT AATGTTTTGCAATGAAGTAGGAAGTACAGCGATTTCTATTGTGATATTTA CTTCCTTTCCTAGAAAACGGTTCTAAATTAATTATCGTTTCGAATAATTA TGATTGAACTTTACTACCTACATACAGTAGAATCATGAAGTTAATAAAGA TAGGTGGAGAGTCAATGCCTTTTGTTCTATTCTGATTTATCATCGGAAGC AAACAGCTGTTTGGTTGCTTTGGGAATAAGATGATTAATTATGGGTATAC TCGTGGGAATATTTAAGATAAATGAAAAGACATTACATTTTTAACAAGTA TCTTGAAATATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030564XLOC_030564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048035-exon-scaffold_14-1575043694:486726..486930TCONS_00048035-exon-scaffold_14-1575043694:486726..486930Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1575043694:474573..474689TCONS_00048035-exon-scaffold_14-1575043694:474573..474689Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1575043694:470817..471235TCONS_00048035-exon-scaffold_14-1575043694:470817..471235Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1510915933:486726..486930TCONS_00048035-exon-scaffold_14-1510915933:486726..486930Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1510915933:474573..474689TCONS_00048035-exon-scaffold_14-1510915933:474573..474689Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1510915933:470817..471235TCONS_00048035-exon-scaffold_14-1510915933:470817..471235Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1491911889:486726..486930TCONS_00048035-exon-scaffold_14-1491911889:486726..486930Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1491911889:474573..474689TCONS_00048035-exon-scaffold_14-1491911889:474573..474689Clytia hemisphaericaexon
TCONS_00048035-exon-scaffold_14-1491911889:470817..471235TCONS_00048035-exon-scaffold_14-1491911889:470817..471235Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:470817..486930 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.71716 3.03667 6.00812 5.37997 5.70711 2.80345 5.12465 4.70268 5.71309 3.9405 9.82442 6.97884 9.62191 11.941 3.49243 2.80936 2.89248 4.24996 5.08479 4.73688 6.00175 5.88613 4.45729 5.09529 13.3721 9.609 6.14206 8.05569 7.79834 7.7853
Blast
BLAST of TCONS_00048035 vs. Swiss-Prot (Human)
Match: ETHE1 (Persulfide dioxygenase ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.260e-25
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  115 GDPEMLYESVHSKIFLLPEDFHLYPAHDYKGHHVTTVAEEKSLNPRLTKTKEEFVQLMKNLGLAYPKKIDEAVPWNMKCG 354
            G  + LY SVH KIF LP D  +YPAHDY G  V+TV EE++LNPRLT + EEFV++M NL L  P++ID AVP NM+CG
Sbjct:  169 GCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCG 248          
The following BLAST results are available for this feature:
BLAST of TCONS_00048035 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ETHE11.260e-2560.00Persulfide dioxygenase ETHE1, mitochondrial OS=Hom... [more]
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