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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048036 ID=TCONS_00048036|Name=TCONS_00048036|organism=Clytia hemisphaerica|type=transcript|length=778bp
cactgattgagaAAGGATTTTTCCTCAGTGACTACAAAGCAAAAAAATAG
CTTTGATatctttctatcaatttcagctgataaaaagggtgtcggaatta
gttcagagatgtcgatattagaccaagttacggtacaaTCGGTGATTCAG
CTTTGTCTGGTATTTCCATACTATAAGGCGACACAATTTTCCAATCTACA
TAGTTATGAGCAACCCCTTGCCATGCGTACGTATTCACAGGCGAGAATGT
TCTATCTAAAAGCCTCCTAGTGTCAGGTGTTCTTGTACGCGCATATTTTG
GATCACTAAGACGGGAACATAAACTGTTGATATCTTTGTTTGTTAGTTTC
TTGTTTCTCTCTATATGTACTTTTCTGTTGATTTCACGTTCTTTCTTATG
CTTTGGGGTAGACATTCGATTTAAAAAATTCTCCATTTCTCCAAGCGTTT
TTTGTGTGCCTCGGGCGGGTGTGGGCGAAGGGTGTCGATTCAAGGGGCGT
GATACTCGAAGGTTTATTCGATTCAATTCATCTTCGCATTTTATCGAGTT
ATTGTTCGATGATTTAATCGAATCGTATCCGATTGATGTTTGCTGATGAC
GACTTAATCTATTCGAGATATCGATCAGTTCATCTTTCCGATATTTCCGT
TTGTTTGTTTCAACCGAATGGTTTTGATTATCGATTTTGTATCGGGTAGA
ATGTATGTTATAGACACCCTGTTTGGGGCGTGATAATCGATTGATTTGCG
TTAAATTCatctttttattatttcttta Run BLAST on NCBI transcript from alignment at scaffold_14:477531..478427- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048036 ID=TCONS_00048036|Name=TCONS_00048036|organism=Clytia hemisphaerica|type=transcript|length=897bp|location=Sequence derived from alignment at scaffold_14:477531..478427- (Clytia hemisphaerica)
CACTGATTGAGAAAGGATTTTTCCTCAGTGACTACAAAGCAAAAAAATAG
CTTTGATATCTTTCTATCAATTTCAGCTGATAAAAAGGGTGTCGGAATTA
GTTCAGAGATGTCGATATTAGACCAAGTTACGGTACAATCGGTGATTCAG
CTTTGTCTGGTATTTCCATACTATAAGGCGACACAATTTTCCAATCTACA
TAGTTATGAGCAACCCCTTGCCATGCGTACGTATTCACAGGCGAGAATGT
TCTATCTAAAAGCCTCCTAGTGTCAGGTGTTCTTGTACGCGCATATCTTG
GATCACTAAGACGGGAACATAAACTGTTGATATCTTTGTTTGTTAGTTTC
TTGTTTCTCTCTATATGTACTTTTCTGTTGATTTCACGTNATCAGGTGTT
CTTGTACGCGCATATTTTGGATCACTAAGACGGGAACATAAACTGTTGAT
ATCTTTGTTTGTTAGTTTCTTGTTTCTCTCTATATGTACTTTTCTGTTGA
TTTCACGTTCTTTCTTATGCTTTGGGGTAGACATTCGATTTAAAAAATTC
TCCATTTCTCCAAGCGTTTTTTGTGTGCCTCGGGCGGGTGTGGGCGAAGG
GTGTCGATTCAAGGGGCGTGATACTCGAAGGTTTATTCGATTCAATTCAT
CTTCGCATTTTATCGAGTTATTGTTCGATGATTTAATCGAATCGTATCCG
ATTGATGTTTGCTGATGACGACTTAATCTATTCGAGATATCGATCAGTTC
ATCTTTCCGATATTTCCGTTTGTTTGTTTCAACCGAATGGTTTTGATTAT
CGATTTTGTATCGGGTAGAATGTATGTTATAGACACCCTGTTTGGGGCGT
GATAATCGATTGATTTGCGTTAAATTCATCTTTTTATTATTTCTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048036-exon-scaffold_14-1575043694:478152..478427 | TCONS_00048036-exon-scaffold_14-1575043694:478152..478427 | Clytia hemisphaerica | exon |
| TCONS_00048036-exon-scaffold_14-1575043694:477531..478032 | TCONS_00048036-exon-scaffold_14-1575043694:477531..478032 | Clytia hemisphaerica | exon |
| TCONS_00048036-exon-scaffold_14-1510915933:478152..478427 | TCONS_00048036-exon-scaffold_14-1510915933:478152..478427 | Clytia hemisphaerica | exon |
| TCONS_00048036-exon-scaffold_14-1510915933:477531..478032 | TCONS_00048036-exon-scaffold_14-1510915933:477531..478032 | Clytia hemisphaerica | exon |
| TCONS_00048036-exon-scaffold_14-1491911889:478152..478427 | TCONS_00048036-exon-scaffold_14-1491911889:478152..478427 | Clytia hemisphaerica | exon |
| TCONS_00048036-exon-scaffold_14-1491911889:477531..478032 | TCONS_00048036-exon-scaffold_14-1491911889:477531..478032 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:477531..478427 - |
Blast
The following BLAST results are available for this feature:
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