TCONS_00048038 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048038
Unique NameTCONS_00048038
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1871

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048038 ID=TCONS_00048038|Name=TCONS_00048038|organism=Clytia hemisphaerica|type=transcript|length=1871bp
CGAGCGGTATTCAAGCCAATCGGACGAATATAGAAAAGAATGTCGGAGGA
ATGGGAACAAATGGTGTTGCATCAGAAGATTACGATATACGGAAAGGTGG
AAGCTCAAGGTGGTGATGGCGGTTCGTTCAATGGGACATTTTGTGGAGGC
GGTGCTGGGGGCGGAATCATTGAGTTGAATGCCTTGGAAGCCATTACTGT
TTACGGCTCATTGAATCTGGATGGAGGGCGAGGGTTACGGCATGGTGGAC
AAGGAAAACTTAGCATGTCAACCACCATCCAAAACATGGAGATAAATACT
GATTTTTGTTATATGCGTTCCACGGAGTTTGGAAGCAAGTCTCTAAGTGG
AAAAATCATTGACAAAAGTGGCCAAGAGACTACATGTAAAATCACTCTCC
GCAATAACTTTCACCTTAAAAGCGGTGGTACCGTAACCCTCACTGGGAAG
AACTTGCTATGGTTGATTGGTCCAGTAGGCTCCACTTTTCGCTTGGATGG
AACATTGAAAGTCATGGGGGATGAGAATGCAATGGTGGCGAGATCAAGCA
GTCGTTTTTTAGGAGGATACCATAACCTAAATGGGTTCTCAAATGCAGGT
CCAACTTCTGGGAAGTTTTCAGCATTCCATGGAAGCAGGCAATCGATAAA
AAACTTTGACATCAAAATGAATAGATTGCTGGGTGGTAGTTCTTGTACAG
AGATATCGAATGGTATTGGTGGAGGATCCATTGTGATCCAGGTTGAAGAT
GGAAATATCGAAATCACAGAAAGTGGTTCAATTAGAGCTGATGGATTTTC
ATGGAAAACTAATTCAGGTGACAAATGCGGAGCAAGTGGTGGAACCATTC
GCTTGAAAGCCAAAAGTATTGCAATAAATGGCGTCTTATCAGCTAAAGGA
GCGCAAGGCTCAAAGTCCAGCGGAGAGGGCGGAATCATTATCGTTAGATC
CAATACCTTAAACGTTGGCTACGGTGCAAGTTTGAATGTATCTGGAGGTG
ATAGACCTCTGAATGAGAGTCTAGAAGGAACGGTTTCACTTTTGAATCTC
ACCGACAACGTTCGAACTAGTACCCAATCTTCATCCGCTTTCCAGTCACA
AGCAATCAACCCTTCTTCTTCCACTGAAAATGGTTTGTGGATGACAACGA
AAGAAATTCCACCAACTAGCTCTCTATTTGATTTACAAGACCTATCAACA
AGCTTTGTTAGTTCAGGTGAAAGTCTCAATGCTCCTAATGCAGATAAAAC
AAAAGATAGCCAAGAATCTTTTTCCATTCGAAACATGGAAACCCCATCCA
CAGTTAGTGCAATAAATACATACTTCATCAACCAATCTAAATCGTCTGCA
TATATTCACATTTCAACATCATCAGTGAAGCAGGAACCTGATGAAGAGGA
TACATTGATTAGACCAGAGTTACAGGAGATTGGACGCACCAATGTAACCA
CGCAAGGAACGTTAGCCATTCTCAGAAACGTCACCAAAACGAAGCTGAAC
CCTTCAGAGATCGATTTCACATTGCAAGTATACAGGAATATTTCATTCGC
AAAGTTCTCAAGAAGCACGTATACGAGACTGGAGATCATGAAGGAGCTGT
TGTTGATTGCTGATAACCTTCTCGAGAATTCAAAACCAGAAACTGAGCAA
GAAAATActccagaaaaaaacaaaaagtttgAGAGGGTGTTGACAACTGT
GGTATCTTCATTGACCTTTCTTTCGGTAGCCACTGGACGATCCTCGGATA
GAAAGAATCAAACTGTCGTCTTGAGGTCCAAGAGCACTGCAATTGAGATC
ATCACCCAATTACCACAAACAAGCAACTCAACTTCAAAGAATATTACTTT
CCCACAATACTGTAACACAAG
Run BLAST on NCBI

transcript from alignment at scaffold_14:550087..560604-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048038 ID=TCONS_00048038|Name=TCONS_00048038|organism=Clytia hemisphaerica|type=transcript|length=10518bp|location=Sequence derived from alignment at scaffold_14:550087..560604- (Clytia hemisphaerica)
CGAGCGGTATTCAAGCCAATCGGACGAATATAGAAAAGAATGTCGGAGGA
ATGGGAACAAATGGTGTTGCATCAGAAGGTAAGCTTTTACTTCTCTTTCG
ATAACTATCCACCCAAAGTTCGGGGAAGGCACTTACTAGAACCTGCTGTT
CAAATTAAGTCCATTGCATACACAAAGTGAATCTAGAAAAAAATGTAACA
AAATTTATGGAAATTCTCAAAATCATTTCAAGTTATCTGGAATGTAGTAT
ATCCTAGAAAGAAAGATATTCGAAACATGTGAAGAAACATATTTGAATAG
ATTTTGGAAACGACTTTCAAGCGACTTTCGCGTCGTACGAATTCATTTAT
ATATCGTTTCATGTTTCATTCTCAATAATGATATTAAAAGGAAACTTTTA
TCTTCACGTTAAAAATATAAGACGCTTGATCCTTAAACAACGAAAATTTT
ATATCCTTTCTTCTTACCTTCGTGAAAAAGTTTTGCTTTTCACCACACGT
AAGTACTTTGTACAAAATATCGCGAAGGCTCAAGATCCAGTTGATCTTCG
AAAGAAAGAACATGACATCACTTTACGACTCTGGCGAACCTAAAATACGG
AAAGAAAATCTAGATTCTTGAAGAATAAAACTTGGGTAACAAAAAAATGA
CCAGATAAAACTCTTTCTGATGGTGAAAAACTGAAACTTAAAATAAACAA
AGCAAAGCTCTCAACTGACCTAAACAAAAATATTAAGCAATACCGTCAGA
AGTAATGAATTATAAAACTCTTCAGTGATTGCCTTTCCATCATTTTAAGA
CTTGAATATTTGGATGGGTTACTTGTAGGTTTTTTTTATGAGTTATGTTA
AATTTGTCAATCAATCAATAAATCTTTGTTGTTTCTTGTCTGTGACCCAT
CCAAATATTCAAGTCTTAAAAATGAATTATAACCATGCTTGTCACAACAG
GTTTCGGACCAGGCAGAGGAATCGGTCAGGGAGGTGCCGGACATGCAGGA
TTTGGCGGAAATTACGGTGATAGTACATTTTATGGGAAAGCTTACGGTAA
AATTGGTCAATTTATTGGTGGAAGCACAGGTAAGCCTAGAAATTTACATC
ATATCAGGACTTTCAAAGAAAATACTATTACAATTAACCCTTTAAGTGCC
AATATAGAATACATCGGAGGCGAAGCCCTCCTATAGTGCCCAGTTTGAGT
TAGAAATCGTCATTTTTAGATAGTCTAACTCGTAGGAATTGGATTGTGCT
TCACGATCAAGCAAAAAAAAATCAAAAGTGAGTCTTTCCAGCAATATTTT
AAGTCAATAAAATGCACAAATTTAACAAAAATCCAATTTTTTGACCATTT
TTAGTCAACGAGTGATTCAAGAAGCTCAAAATTTGGCCCTGTTTTACATT
GTTTTGTCCTCTAGCGAATTGATTTGAAGTTTTAACACTGGGCACCTTCC
TGTCATTCATTCAGGTCCACGCAGCCCTAACCTACCCCCGTAGCCGCCGC
TCACCCCGCCCATCCTAAATCAGGCAGTCCAAAAGAAAGTAGCCAGAGAC
TCTAAGCTATCCAACGAGCTATGAACAAGCTTCTAAATCCTTTTAGATCC
AGAGATATAAGCCTTTAAAGTGCGAACTAGCGATTTTCTTAAGCGACTTT
AAAAAAGGATTGTGGCACTTAAAGGGTTAAATCCCCTCTAATCATTGTGG
TGAAATTACAAAATGGCTGATTTTTTAGGGTTAAATCCCCTCTAATCATT
GTGGTGAAATTACAAAATGGCTGATTTTTTAGTTCCGGCTCTATGTCTTT
TCTCTAGCTGTAGTTTATAACCTTTCAAAAAATTGCGCAATAAGAAAGTT
ATTTTGCATTTTACCTTGACAATTTTAAACACCATCCATTTACTGTGTAT
TCTTTTCAGCGGCCAATTTCCAATATTCGTGGGCAGCGTCAGGTGGAGGA
ATCATCATCATCAATGCTCCGCAAACTAACTTCGTGCTAAGTACAAACAT
TTTCTTCTTTGAAATCTCATTTCTTAAAGACCTGGCTAGACTTTGAGCTT
TTGTCAAACAAATTCGCTAACGAGCAGGCTTTGAATTAAAGAGCAACATC
AATAAAAATATTTGTAGCAAACATTAAAGACTTGATTTTAAGCGTATGTC
CCAGTAATGTAGGACATTTAGACAGGCTTTGGGGCTAACCTCAATGTCGT
TGAGGTTAATATTTATAAAATATTATAAAAATATGCAGAAGATCGTTCAA
GAACGTCTAATTCATTTCCTTCTTCGATATAGCGGAGAATGGTACGATCA
CTGTCAAAGGAGAATCTCCGATATTGGATACGAAATACTTCATTCAGTCT
GACCCTTGTTCTGGCGGAAGTAGCGGTGGATATGTTCAAATCAAAGCCTA
TAAGGTTAGAAGTGCACACCACCTTTAAAGTAGTCTCGATTTCCAAACCA
TTATTCTTTTTACGCAAAAAAAGGGGCAATTCTCCTACAAAGTAAAAAAT
AGGAGTATGTCTGCCATAAAAAAACCGCGTGAAAGAGTGTTTTGAATAAT
TTTTCCTCTTTTGACGAGCGCACTTCTCTTTTGCAGAACTGTTCATTTCT
TAAGTGTTTGATAATTAGGTGAAGCTGATTATTGACCTGGAATCTTAAAT
TATTAGTCTAGATCTAGACCACGTTTATAGGAAATAACATTTTTGCGGGG
AAGTTAGGCACCAACTACAATGACTTCCTTTAGGTTGTTTTTCTAACTGT
ATGGAATAAACTCTTTGACAGAAGTGTAGTTTTTCTTCAAATCATAAGTA
TCATATCTAGTCTTTATGAATCCCGATTTCTCTGACGAAGCCCCGGGTAC
TACGAAGGCTTGATAAATAGCCACTTTAACAAAAAGATAAAGCTGACTCT
TGCTAATTCGAACTGGAAAGGGGGATCTTATTTTCTCGACTTATAGAAGC
TTTTTTAAGAAGTTTTCTCGTTAACGGGAACCTGAAATAAATTCAAACTA
AAATAAACTTTGAATAAGCAACAGTGTGGTATAGAATTTTTCATATACAA
TTGTTATATTTGCAGATTACGATATACGGAAAGGTGGAAGCTCAAGGTGG
TGATGGCGGTTCGTTCAATGGGACATTTTGTGGAGGCGGTGCTGGGGGCG
GAATCATTGAGTTGAATGCCTTGGAAGCCATTACTGTTTACGGCTCATTG
AATCTGGATGGAGGGCGAGGGTTACGGCATGGTGGACAAGGAAAACTTAG
CATGTCAAGTAAGATGATAATCCGATCGTTGAATCGAGTTTAAACCTTTT
TTTCCAGAATTCGTTCTTAACGTTGTGGTTTAAAAATTTTAGATAAAGCG
TTGTTTTCTGAACTTATTTTGCTTTTGTCTTTGGTAGAAGAGAAATAACA
GATACCAGAATCGGGACCAGAATGCAATTCCATTTCATCCACTGTCTAAT
AGCGGAGACTTGAGGCTTTCTTAGGGTAATTTTTTCTTAAAAAAGGAGTA
CATAAAATCATTCTTGCCAACTTTTGTAGCCACCATCCAAAACATGGAGA
TAAATACTGATTTTTGTTATATGCGTTCCACGGAGTTTGGAAGCAAGTCT
CTAAGTGGAAAAATCATTGACAAAAGTGGCCAAGAGACTACATGTAAAAT
CACTCTCCGCAATAACTTTCACCTTAAAAGCGGTGGTACCGTAACCCTCA
CTGGGAAGAACTTGCTATGGTTGATTGGTCCAGTAGGCTCCACTTTTCGC
TTGGATGGAACATTGAAAGTCATGGGGGATGAGAATGCAATGGTGGCGAG
ATCAAGCAGTCGTTTTTTAGGAGGATACCATAACCTAAATGGGTTCTCAA
ATGCAGGTATGAAGTTTTTTATAAGTTTTTCATAAAAAACGCCTACTTTC
TCACCCACTAGTTCTCAAGTTATTTTTTTATTCTGGTGTTTTTTTTTGCT
AGCCCAGTAAAAGAAAAACTTTCCAACGGTTAATTATTAGATTCTTTTCT
GGAAACTCAGTTATTTTACTATCATAAATAGGCTCTTATGTTGATGAATT
AAAAGGTCTGTCTTTATTGAAGAACTGACTCTTTTAATATTTTTCGGAAT
TCTAGGTCCAACTTCTGGGAAGTTTTCAGCATTCCATGGAAGCAGGCAAT
CGATAAAAAACTTTGACATCAAAATGAATAGATTGCTGGGTGGTAGTTCT
TGTACAGGTAGGAAAGCAAATTCGCAACATTCAAACCCTGAAAAAATCCG
TTCTTACTTATCGATCTGTCCTCATAAATATTTCATACCAAGAGATAACT
AGCAGGATTTTTAAGCAAGGGGAGAAAACATAACGATACATGAAAACTCG
ATGGGGACTGATACTCTCATTTTTTTAACTGGGGATTTGAACGCTATTGT
TATGAAGTCAGAAACTTCAGTGGAAATGGGAAAAAATAGTACGAAAATTG
GAGTATTATTTTCCACTGGAACAATATTTTAGCCAAATTTCCATTAGGAG
GAGTCTCACCGCCGGGTCTGTGGGAAGAGATTCTTCACAGAGCGAATGGC
ACTGTACTTCACTATACTTCACATCCTCATTATACAAATTTAGAGATATC
GAATGGTATTGGTGGAGGATCCATTGTGATCCAGGTTGAAGATGGAAATA
TCGAAATCACAGAAAGTAAGGCTAAATCAATTTCATTTCATTTATAAAAA
TGATTTTTATCATAAACTTGTCGATTAAAATTAACTGAAAATTGAAATTG
AATACTTTAGTATTTCGATAAAAAATAGCTTACAAATGTCGTTAATGAAG
TGTTTTAGTCGAACTAATTTATTTGTTACGCCATATTAAAAAATGTGACG
AAAGAAACTCTGGCATACAAAAATATTTTTGTTTCGCCAACAATAGGTGG
TTCAATTAGAGCTGATGGATTTTCATGGAAAACTAATTCAGGTGACAAAT
GCGGAGCAAGTGGTGGAACCATTCGCTTGAAAGCCAAAAGTGTAAGTATT
TAAGATTAGTGCCCTTTGTCAATTTTTCTGAAGCTCTACCATAAAAGGAA
AAAGAAAATATTACCACTGCCTCGTTTGTAGCTCGAGAACCTTTTAGTCA
ATTTGGATTACTGCATGGGACTAAGAATGCCCACGATGAAGAACTAAAGA
AAAATATGAAGAACAAAATTGAAATACAGGAGTGTATTATTTTACAAACA
CTCAATGTTTATTTTCTAGATTGCAATAAATGGCGTCTTATCAGCTAAAG
GAGCGCAAGGCTCAAAGTCCAGCGGAGAGGGCGGAATCATTATCGTTAGA
TCCAATACCTTAAACGTTGGCTACGGTGCAAGTTTGAATGTATCTGGAGG
TGATAGACCTCTGAATGAGAGTCTAGAAGGAACGGTTTCACTTTTGAGTA
TGTTTTTTTCTCTTGGTGTTGAGATTCCTACCATCTCTAAATTTCATCTT
GCCTTTTTTACTACCTTCTTACGGCGGCCCTTATTGAGGTTATATTTTCG
TCGCCGGCGTAATAAGGCCCGGCGTACGGGATTAGGATTCAATTGTTTCC
AGGGTAGAAATAGAAAAGTCGAGCTTCAGCGCGTAATTAGGATTCTTTCT
TTTAACTTGGTGTTGACAAGCAGGTAAGGGGTTGATTTGTTGTTTCTTTT
GCTTACTAACACAGAGAGTCATAAAGTCAAGTCCAATATCTCCTTCACCT
TCTTTTACAGATCTCACCGACAACGTTCGAACTAGTACCCAATCTTCATC
CGCTTTCCAGTCACAAGCAATCAACCCTTCTTCTTCCACTGAAAATGGTT
TGTGGATGACAACGAAAGAAATTCCACCAACTAGCTCTCTATTTGATTTA
CAAGACCTATCAACAAGCTTTGTTAGTTCAGGTGAAAGTCTCAATGCTCC
TAATGCAGATAAAACAAAAGATAGCCAAGAATCTTTTTCCATTCGAAACA
TGGAAACCCCATCCACAGTTAGTGCAATAAATACATACTTCATCAACCAA
TCTAAATCGTCTGCATATATTCACATTTCAACATCATCAGTGAAGCAGGA
ACCTGATGAAGAGGATACATTGATTAGACCAGAGTTACAGGTGAAGTAGT
GTTCATTTTGTTTTGTTCCGATTCTATAAATTTTTTTTTGTTCCCCGTAA
AAGCACAATTAAATTTCCGTAAATGTATAGTAAATGAGTCACTGTAGAAT
GATTATAAAAGGTTCTCTCTCATTGTATTGTATGGGCTCAAATGTTTTTA
ATAATCAGTTCCGAAACTCTTTTCGTACAGGAGATTGGACGCACCAATGT
AACCACGCAAGGAACGTTAGCCATTCTCAGAAACGTCACCAAAACGAAGC
TGAACCCTTCAGAGATCGATTTCACATTGCAAGTATACAGGAATATTTCA
TTCGCAAAGTTCTCAAGAAGCACGTATACGAGACTGGAGATCATGAAGGT
TGGTATGGTCTCCTGAGTTGATATGAGGTTGTTTTTTTTCGAAAGATAAA
TTCATATTTGGTATTTGTGGAAGTTGCTATCATTATGATAACTTTTTTTT
AACATTATTTCCTTGATCTCCAAAAATATTATTGTGAAAAGCACAGACCG
ATATCATATATCGACGCTGAACCGACCAATCCAGATTCTATTCAGCGCAC
AATCAACGCAGAACAAAGTAACCATGACGACCATCCAAGATCTTGGATGA
AGTTCAAAGTTGATAGTTTTATTCCCGTCGTTGAAAACTCAACTAAAAAA
TGTCATCAATGCTTTAGCATACCGTCGCGAATCTAAAAATAGACATTGAT
TTTTATGTTTGACTGAAATTCAATCCCATCACTCTTTGCGTTTATTACGC
TTGAACGCAAATTACACTCAATTACAAAGAAAAAGTAATAACTTTCACGA
CTTTTGAATTAAGACGAAAAGGATTGTGGGATTGAATTTCGGTCAAATGA
GAGAAGTAATAATCATGATGTTTGCACGACGAAGCCCTATTAAAGTGACA
TTTCCATAATTAAAAGTTTAGTAATTACTGTTATACATTTGGGGATCATG
TAAAAAATTTCTTTTGAAAGAAACTCATTTCAATTACACTATTCGTTACA
CGGAATTCGTAAATAGTAACTGCATACTGATACAGTCTGCTAGACATTAA
TGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCTTGCAGTATTCTTT
TGAATTCTATTGTTCCGCGCAATTGTTCGGTTTGTCAAATGCCTAATGAT
GCCAGCTTGTTGGCATTTCGTTGGCATTTGAAATGCCATTTTGAGCAAAG
GAATCCCCTTTTCTGGCATTTCAAATCAAACAAGAAACCAAAACAAAGAG
AAAAAACGACATTTTTGATTTTTTGAAGTATTTGCACGTTTTTTATTCAG
TTCTTTCTATAGATTGTAAAATTTGCAAGATTTGCCATAGCCTAGCCCTA
CGGCAAATAGTTTCAGTCTTAATGACTGCAGTTTTTGGGAAATGCCATGC
TTTTCATTGTTTGATCTGTCAAAGTTGAACTTGAGGGAATCACCTTTTCA
GTAATGACTCTAAAAAGACGATTCCTTAACTGCCATGACAGAAAATACAA
TGGAAAAGCTATTAAAATCGAATCCCTCATGAGCAAATGCCAAATTACAA
ATGCCAGTTGGTCTAAACGCAGCCAATATGGTAATATATTTGCTCTTCAT
CTTGATTGATCTTGATTGATCTTGATTTTTTTTACAATGATTAAAAGTCT
TTTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAAG
AATTCTTCAATCTTTGTAAATTTGGTATCATTGGAAAAATATTAGTGAGT
GGAACAATTTGAAATAAAAAAACCTTTAAAAAAATTCTAAAAATGAAGAT
GAAAATGAAGAAGAAAATAATGAAGATCTTGTAAAAAAGTGCTATAACTA
TCATTTTCACTGAAGTGAATCCTTGATCATCGAACGTCATCACTGTGAAA
AAATTCTCAAAAATAATCATTCAGTCAAAAGATATTAAACAAAGTTATAA
GCTAATTGACGTCTAAAAGCGCTGTTTTCTGCTGTTTTTTTATTTCAAAT
TATTTCACTCACTAATATCTTTCCAATGATACCAAATTTATAAAGATTGA
AGAATTCCTTCAAATGTTACAAGTAAAGGAAAAAAGAGTGCACACTTATC
GTGAACAGACTTTAGATTGATGACACAAATTAAATTTTTATTATTGGTCT
TCAGAGGTTGAAATATTCTCAACTTCTGATACTCAGGGTACAAAAATATT
GGTTTTTCTTACAAGAAAAGTGTTATATAATGTATATGCTGTGTGTATAA
AATATACAAATAACTAACAACTCGAACAAATACGGGAAGAAGGACTCATC
GGAAGGAATAAGAAAAACTAAATGACACTCGGAATCAAAATACTGAGATA
TGGTGCTCAGAAGTTTTGTTCGATTAGTTGTACTTAGATTGGATAACGCT
TGGTCATACATAATGTTGTATGGATAACTAAAGACCGGTCTCCACTTTTG
CGCGAAAATGAACGAAAACTTGTTCTCAAACGTTTTTGCCTGTAGAAAAT
ATTACATCATTAAGAAAGTTTCGAACGAAAAAGTAAAGGGTTTAAAGAAG
TTTAACTTTTTTAAACCGTTACGTCAGATTTGCCCAATGAATTTGCTTCA
TTTTCAAACGACCAATGACCTAGACTATGTTATAGTCTAAGTCAAATCAC
TATCTATGAAATAAGCCCAAAGCCGAAGAAAATTTGCAAAACGGGCTTTT
TTTCGAAAAGAGTTTACAACCGTAGAGTTTTCTTCGAAATTCTCCCGCCG
TGTACCGCCTTAACGCCATACCGCCATTTTATTCATGTACCGCCTTAACG
CCATACCGCCATTTTTTCCCGTCTTTACTATCACTGTAACGGACGATAAC
ATTGTCTACTAATGACCTTGCAAAAACATTCATTTCGAATTATTAGGAGC
TGTTGTTGATTGCTGATAACCTTCTCGAGAATTCAAAACCAGAAACTGAG
CAAGAAAATACTCCAGAAAAAAACAAAAAGGTTTGTTGTAAATGTTCTGA
ATAATAAAGAGTAACAAAAAATATCAGGCTTGGACTTTTACTTTGATAGT
GATAGCCTAGCTGGTGGTGCTACCTCAAAACCAAACCAACAAACTGCCCA
AAAACCTAATAACATTGTCAAAACGTCAAAACAAGTCGTCTGTAGGCATG
GTTTTCTTCTATATAGACATGTCAAACAATGTTTTCGTACTTTTTCTTTT
CCAGTTTGAGAGGGTGTTGACAACTGTGGTATCTTCATTGACCTTTCTTT
CGGTAGCCACTGGACGATCCTCGGATAGAAAGAATCAAACTGTCGTCTTG
AGGTCCAAGAGCACTGGTATATAGTGGATTCCGTCTTCATAAACTACTCA
CTACAATCAGAGTCATAATATATTGGCACTTTTGGCTAATTTACAGTTTT
TCGAAAATTGAAGTTCGAGCGAGAATGTCAATTTTTAGGCCTTCAACTTG
ATTTCATCAAGTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGAGCGAGAATGTCAATTTTTAGGCCTTCAACTTGATTTCATC
GAGTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGGCTATATTTCAAG
CCCTACTGTATCATTTTTGAACTTTTGGATCCTCAGATCCTAAGGTCCTA
AGTCTTAAGTCTAGCGTTAAAGCTCAGAGTTAAAACTCTACCCTTCTACC
CTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAACACCCCGGTGAATT
TCCCTTTTGTGCCAAGTATTTTGTCCCTGATTGTAGAGAAATGTTATTAG
ATCTATTGTCAATAATTACAATGGTCATCCTCACGTGTAAATCTTCAAGC
GCTTTTCGACAAATTTTAGATCTTAGAACAAAATATTTTTTGGGGGGCGA
TACAGACGATGCTATCGTCTATTTTAGAGGGTCAGTAACCGCGGGAAAAT
ATATAAGCACAGAGTCAGGGCGGTTTATGGGAAAAAAGTGCTGGTAGAGT
TTGGAGCAACTGTAAACAATGTAAACACCACCGCTACTGCTTACTCCACC
CGAATTTATCACGCCTCTTCTAAACTATTCCTTTTTTTAGTGATCTTGTG
TAGACGATAGGATCATCTAGGGGGATATTGTGTTGTTTCTATAGTTCTTT
TCTTCGTTTTCTTCCAATTTCAAAACAGCCTTCTCAACATAATTTTTCTT
GCTCTGAGATCTGGAACATGTGAAATATTCATGTGCCTGCATCAGAGTAC
CATCTGTAACCACCGTTGTATCGCATGGTCGTGAAAAGGGTTCAAAAAAT
TAGTTGCAAGGAATGATTTCCCATTTATACTTTCAGCAATTGAGATCATC
ACCCAATTACCACAAACAAGCAACTCAACTTCAAAGAATATTACTTTCCC
ACAATACTGTAACACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030567XLOC_030567Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048038-exon-scaffold_14-1575043694:560527..560604TCONS_00048038-exon-scaffold_14-1575043694:560527..560604Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:557347..557539TCONS_00048038-exon-scaffold_14-1575043694:557347..557539Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:556749..557075TCONS_00048038-exon-scaffold_14-1575043694:556749..557075Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:556398..556499TCONS_00048038-exon-scaffold_14-1575043694:556398..556499Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:555940..556011TCONS_00048038-exon-scaffold_14-1575043694:555940..556011Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:555614..555708TCONS_00048038-exon-scaffold_14-1575043694:555614..555708Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:555208..555385TCONS_00048038-exon-scaffold_14-1575043694:555208..555385Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:554515..554894TCONS_00048038-exon-scaffold_14-1575043694:554515..554894Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:554157..554324TCONS_00048038-exon-scaffold_14-1575043694:554157..554324Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:551525..551608TCONS_00048038-exon-scaffold_14-1575043694:551525..551608Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:551189..551300TCONS_00048038-exon-scaffold_14-1575043694:551189..551300Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1575043694:550087..550168TCONS_00048038-exon-scaffold_14-1575043694:550087..550168Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:560527..560604TCONS_00048038-exon-scaffold_14-1510915933:560527..560604Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:557347..557539TCONS_00048038-exon-scaffold_14-1510915933:557347..557539Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:556749..557075TCONS_00048038-exon-scaffold_14-1510915933:556749..557075Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:556398..556499TCONS_00048038-exon-scaffold_14-1510915933:556398..556499Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:555940..556011TCONS_00048038-exon-scaffold_14-1510915933:555940..556011Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:555614..555708TCONS_00048038-exon-scaffold_14-1510915933:555614..555708Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:555208..555385TCONS_00048038-exon-scaffold_14-1510915933:555208..555385Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:554515..554894TCONS_00048038-exon-scaffold_14-1510915933:554515..554894Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:554157..554324TCONS_00048038-exon-scaffold_14-1510915933:554157..554324Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:551525..551608TCONS_00048038-exon-scaffold_14-1510915933:551525..551608Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:551189..551300TCONS_00048038-exon-scaffold_14-1510915933:551189..551300Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1510915933:550087..550168TCONS_00048038-exon-scaffold_14-1510915933:550087..550168Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:560527..560604TCONS_00048038-exon-scaffold_14-1491911889:560527..560604Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:557347..557539TCONS_00048038-exon-scaffold_14-1491911889:557347..557539Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:556749..557075TCONS_00048038-exon-scaffold_14-1491911889:556749..557075Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:556398..556499TCONS_00048038-exon-scaffold_14-1491911889:556398..556499Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:555940..556011TCONS_00048038-exon-scaffold_14-1491911889:555940..556011Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:555614..555708TCONS_00048038-exon-scaffold_14-1491911889:555614..555708Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:555208..555385TCONS_00048038-exon-scaffold_14-1491911889:555208..555385Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:554515..554894TCONS_00048038-exon-scaffold_14-1491911889:554515..554894Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:554157..554324TCONS_00048038-exon-scaffold_14-1491911889:554157..554324Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:551525..551608TCONS_00048038-exon-scaffold_14-1491911889:551525..551608Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:551189..551300TCONS_00048038-exon-scaffold_14-1491911889:551189..551300Clytia hemisphaericaexon
TCONS_00048038-exon-scaffold_14-1491911889:550087..550168TCONS_00048038-exon-scaffold_14-1491911889:550087..550168Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:550087..560604 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.164665	0.00809389	0.0110328	0	0	0.0126548	1.19503e-07	0	0.138973	0	0	0.4748	1.84793	0.566572	0	0.333429	0.309125	0.272808	0	0.507905	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048038 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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