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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048046 ID=TCONS_00048046|Name=TCONS_00048046|organism=Clytia hemisphaerica|type=transcript|length=1435bp
attttttggccattttttccagtggaagtgggtctatgagaagggggtgt
gtgaTAATAATGGAACTTGAATATAAAAGAGAGAATTATAAGATATGTTG
CAAAATGTTTGGTGTATTgacttttcaattttgaaaaaatattaataaat
attaattataaaaaatatatctaAATCAATAAATTACAATTTCTCGAAAT
TACAAATCAGGGTAAAATGTTTATGTGTATCgacttttcatttttgaaaa
ataataataaataataattatgaaaatatttaaattaaTAAGTTACTATT
TCTTGAGATCACAAAACGGTgtaaaaatttaatctattttaACCTCGACA
AATAAAGAGTCGTCCTTTAAAAATCCTTCAGGTTGCAATCTGTTCAAATT
CATAAACATTGGACAACCTGAAGCAATGTTCATATCTTTCTTTggtttct
gaaagcttgatgaATCTTTGTTTGGAAACATTTTCTCCACATGATCTTTA
CTTCTGTCTTCTTGATTGATCAAagtgaatttgattttcttttggaaagg
cCATTCCAAAATGTTGTCATATTCTGATTTCATAAGAACCAAGAAAAGTG
ACAAGTGTGTTCCTTTTCCCATCCCGTCACCGTGTAGATACAGCCTTAAA
CAGAACTTGTATCCATACTTGCTCGTAAAGCAAGGGGCGGAATGTAATGC
TCTTGTCTTGCCAATAATTGCATCAGTTGTTCGTTGCTGAAAATTGTTGA
TCTTCCAAACAAGATGGCCGTCATTGACCGAGTTCTCATGGAGTTGGAAT
TTCAAGTCAAGATCTGCAAGGTTTTCAGTGTTGTTTTGTATCTGCTCAAC
CGCACCTTCTTGGACATTTCCATCATTGTCAGCTCCTTTGATCTTCTTGG
ATAACTGTGCCATTGCTTCTAATANCCCATTATTGTCAGCTCCGTTGATC
TTCTTGGATAACTGCGCCATTGCTTCCAACAGGTCATTATACTGTAGTCT
AGACTGTTCTTCGACAGCTTGCAGTCTCTTGTTCAATATGTCTACAGTTT
GTTTGAGTTGTTGATTCTCCAGAAATGTTTCTTGATATTGCTGGTTCATC
CCTTTGTTGAATTTGTTGTTCGTTGGATAGAAGTCAATGCTCTCTGATCC
ATACTTGTCcatattttatgatttactTGTAACTTCTTTGTGCTTCCCTT
TGCGTTTATGTAGGTATGCTTTGACTGCTTACTATGTTTGATTTGATTTA
TAGACGATCAAAATTGTCCTTTTATATATTTTGCATAAATTTGCAAACTG
TACAGAATGACGTATTTCAACCTAACATGGAATTATTTTATTATCATTGT
TAAGCCGtagttgaaaacaataaaatatgtGCAAAGAAACATAACAATGT
GATACCAATCATCATGACAATACCAAAATAAGCAT Run BLAST on NCBI transcript from alignment at scaffold_14:732578..749364- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048046 ID=TCONS_00048046|Name=TCONS_00048046|organism=Clytia hemisphaerica|type=transcript|length=16787bp|location=Sequence derived from alignment at scaffold_14:732578..749364- (Clytia hemisphaerica)
ATTTTTTGGCCATTTTTTCCAGTGGAAGTGGGTCTATGAGAAGGGGGTGT
GTGATAATAATGGAACTTGAATATAAAAGAGAGAATTATAAGATATGTTG
CAAAATGTTTGGTGTATTGACTTTTCAATTTTGAAAAAATATTAATAAAT
ATTAATTATAAAAAATATATCTAAATCAATAAATTACAATTTCTCGAAAT
TACAAATCAGGGTAAAATGTTTATGTGTATCGACTTTTCATTTTTGAAAA
ATAATAATAAATAATAATTATGAAAATATTTAAATTAATAAGTTACTATT
TCTTGAGATCACAAAACGGTGTAAAAATTTAATCTATTTTAACCTCGACA
AATAAAGAGTCGTCCTTTAAAAATCCTTCAGGCTGCAATCTGTTCAAATT
CATAAACATTGGACAACCTGAAGCAATGTTCATATCTTTTTTCGGTTTCT
GAAAGCTTGATGAATCTTTGTTTGGAAACATTTTCTCCACATGATCTTTA
CTTCTGTCCTCTTGATTGATCAAAGTGAATTTGATTTTCTTTTGGAAAGG
CCATTCCAAAATGTTGTCATATTCTGATTTCATAAGAACCAAGAAAAGTG
ACAAGTGTGTTCCTTTACCCATACCATCACCGTGTAGATACAGCCTTAGG
CAAAACTTGTACCCATACTTGCTCGTGAAGCAAGGAGCGGAATGCAATGC
TCTTGTCTTGCCAATAATTGCATCAGTCGTTCGTTGTTGAAAATTGTTGA
TCTTCCAAACAAGATGCCCGTCATTGACCGAGTTCTCATGGAGTTGGAAT
TTCAAATCCAAATCACTAAAACTCTCTGTATTTTTTTCTACTGCTTCTGT
TAAAATGTTGAAATCAGGAATTGGGCTCTTCTCAAGTGTACCACTAGTCA
CTTTATTTGAGCATCCAGCAATCTCCTTTTGAAGTTCTTGATATTGCTCC
TTGGATCTCTTCTCAGCTGCATTTAATCTCGCCAATAAGTTGTCCACAGT
TTGTTTAAGTTGAATGTTATCCAATAAGATTTCTTGATAGTCATGTTCAT
TTCCATAATGGTGTGTGGTGGTGTCTGTGTTTTCAATTACTCGTTTAGAT
TCATTAGCCATGATTACAAAAGTTCTCTGAAATAATTCCTTTCTTAGTAT
TTAACTTATTCCTTTCAAGTCTCGATAATTTATGACTGTTCCTTGGAGAA
ATGTTGTACTTAAATATGTTAATTTATGCGGACTTTGAACTTTTAAACAA
TGAAATCATGAGATGAAACTATAATCGAATATTATGACGTGGCATAATTT
ATTTACTATGGTAAATATAGTGAATACACATTAAGATTTTCACAAATTTA
TTTAGTAAACAAAAGTTTCCATGGGATGAAATATTTCATCATATTGCGAG
TCCTGATTGGCTATTGATGATGTAATGTCCGAAATAAATTGAAATTAAAA
CTGACCTAGCTTGTACTGGTACATTCCGCTTTTTTCTGGTACATTCTCTA
GATAGCGATAAAGAAAGTTTGTACATCATAAAGAATAATTTACCCTTCAT
AGGGAAAACTTATAGGACTATGCAATTCGTGCCCAAAATAACGAAAATAA
TTTTCATTAAACACCGCAAAAACAAAACATAAAAAACTTGACAGCAAAAG
AGTTACCTGAAAATTGGTATTTCTAATGTAGAACTATTCTTTACTATTGC
ATGCTTTTGAAGTCACTAGAATACTTTCAAATTCAAAAACAAAAGAACCT
AAAACCAAGCGACTTTTAAAACAAATTCTATGACATATGGCCAAAATTTG
CATGAGTTAGATGAAAAACTCAAACAAACTGTTGACAGCGTAACAAAGAA
AAAAAACCTATAACCAACGACATCAAAAACAAATTCTATGACATATGGCC
AAAATTTGCATGAGTTAGATGAAAAACTCAAACAAACTGTTGACAGTGTG
ACAAAGAAAAGGAACCTATATCCAACGACATCAAAAACAAATTCTATGAT
ATATGGCCAAAATTTGCATGAGTTAGATGAAAAACTCGAACAAACTGTTG
ACAGTGTAACAAAGAAAAGGAGCCTAAAACCAACGACTTTAAAAATAAAT
TCTATGATATACGGCCAAAATTTGCGTGAGTTAGATGAAAAACTCAAACA
AACTGTTGACAGTGTGACAAAGAAAAGGAAACTATAACCAACGACATCAA
AAACAAATTCTACGACATATGGCCAACATTTGCATGAGTTAGATGAAAAA
CTCAAACAAACTGTTGACAGTGTGACAAAGAAAAGGAACCTATATCCAAC
GACATCAAAACAAATTCTATGATATATGGCCAAAATTTGCATGAGTTAGA
TGAAAAACTCAAACAAACTGTTGACAGTGTAACAAAGAAAAGGAGCCTAA
AACCAACGACTTTAAAAACGAATTCTATGACATATGGCCAAAATTTGCAC
GAGTTAGATGAAAAACTCAAACAAACTGTTGACAGTGTGACAAAGAAAAG
GAAACTATAACCAACGACATCAAAAACAAATTCTATGACATATGGCCAAA
ATTTGCACGAGTTAGATGAAAAACTCAAACAAACTGTTGACAGTGTGACA
AAGAAAAGGAACCTATATCCAACGACATCAAAAACAAATTCTATGATATA
TGGCCAAAATTTGCATGAGTTAGATGAAAATCTCAAACAAACTGTTGACA
GTGTAACAAAGGAAAGGAACCTATAACCAACGACATCAAAAACAAATTCT
ATGATATATGGCCAAAATTTGCATGAGTTAGATGAAAATCTCAAACAAAC
TGTTGACAGTGTAACAAAGGAAAGGAACCTATAACCAACGACATCAAAAA
CAAATTCTATGATATATGGCCAAAATTTGCATGAGTTAGATGAAAATCTC
AAACAAACTGTTGACAGTGTAACAAAGGAAAGGAACCTATAACCAACGAC
ATCAAAAACAAATTCTATGATATATGGCCAAAATTTGCATGAGTTAGATG
AAAATCTCAAACAAACTGTTGACAGTGTAACAAAGGAAAGGAACCTATAA
CCAACGACATCAAAAACAAATTCTATGATATATGGCCAAAATTTGCATGA
GTTAGATGAAAATCTCAAACAAACTGTTGACAGTGTAACAAAGGAAAGGA
ACCTATAACCAACGACATCAAAAACAAATTCTATGATATATGGCCAAAAT
TTGCATGAGTTAGATGAAAATCTCAAACAAACTGTTGACAGTGTAACAAA
GGAAAGGAACCTATAACCAACGACATCAAAAACAAATTCTATGATATATG
GCCAAAATTTGCATGAGTTAGATGAAAATCTCAAACAAACTGTTGACAGT
GTAACAAAGGAAAGGAACCTATAACCAACGACATCAAAAACAAATTCTAT
GATATATGGCCAAAATTTGCATGAGTTAGATGAAAATCTCAAACAAACTG
TTGACAGTGTAACAAAGGAAAGGAACCTATAACCAACGACATCAAAAACA
AATTCTATGATATACGGCCAAAATTTGCGGGAGTTAGATGAAAAACTCAA
ACAAACTGTTGACAGTGTGACAAAGAAAAGGAAACTATAACCCACGACAT
CAAAAACAAATTCTATGATATATGGCCAAAGTTTGCATGAGTTAGATGAA
AAACTCAAACAAACTGTTGACAGTGTAACAAAGAAAAGGAACCTATAACC
AACGACATCAAAAACAAATTCTATGATATACGACCAAAATTTGCATGAGT
TAGATGAAAAACTCAAACAAACTGTTGACAGTGTGACAAAGAAAAGGAAA
CTATAACCAACGACATCAAAAACAAATTCTATGATATACGACCAAAATTT
GCATGAGTTAGATGAAAAACTCAAACAAACTGTTGACAGTGTAACAAAGA
AAAGGAAACTATAACCAACGACATCAAAAACAAATTCTATGATATACGAC
CAAAATTTGCATGAGTTAGATGAAAAACTCAAACAAACTGTTGACAGTGT
AACAAAGAAAAGGAAACTATAACCAACGACATCAAAAATAAATTCTATGA
TATACGGCCGAAAATTGCATGAGTTAGATGAAAACTCAAACAAACTGTTG
ACAGTGTGACAAAGAAAAAGAACCTATAACCAACGACATCAAAAACAAAT
TCTATAACATATGGCCAAAATTTGCACGAGTTGGATGAAAAACTTAAACA
AACTGTTGACAGTGTGACAGAGAAAAACAACCACTGTTGATTTCCATCCA
AGAAAAATAGAAGATCTCAACTGAACATTCACTATCTTCGCAAAACAGGA
AAACACTGAACGCAGAAGAACTTGCTACATCTAAAAAAGTACTGTACTAC
AAAGAAATGACGCGGTTCTAGGAAGACTTTCATTAACAAGAAATTCGTTA
TGTTCTCGGAAAATGGTACAACCTTGTCCTATAATCTTCCCAGTGGTAAA
GACAAAGAGTTTGTTTTACTTACTTGACACAAAGACGTCCTGACAGAAAT
TGACATTACACATTTTTGATAAGAACAAACTATATAAGAGCATAAGGCTT
CGATCGTCAAAATGTTAAGAACATTTTACGGCTCTGTGGACTCTAAAACA
CCGAATTTCTTAGGAAAATTGACAAAAATACTTAAAAATGGCTAAAATAA
GAACATCTTAAGAACATTAAAAATGATAACAAGACACTCACTTCATAATC
ATATGAAAAGCAACTTCCCAAAGTATTAGCATGCAAAAATCTTTCTTCGC
TCCATAATAACAAATTATAAATTTTGATGTTCACTCAACTTTCAGAAATT
TCAACTGGCTTCTGAAGGCCTTCGAATTTTCTCTTGTCGTACTAAGTTGT
CGAGACAAATACGCCGGAAGATTGCAGTATGAATTTAGAGGCCGGTTCTG
GTTCGAACAGTTTAGAATCCGCGCTCTTCTCCTAAGAAAAACCCTTTGCT
TGGAGTCGAGTTGCAGGTTTGTGGAGAATCGGTATCGGCTTCAGAACTTC
CAATGAGCCCCGGTTGTGTTGGTTTCAGTCAGACGGAGACGCTATTCTGT
TTTCAGAGGAATCGTCCGAATCCGAGGGAAATTCTGTAAAGATAACTTAT
TACTCAATTTGATATTCAATAAAGCCCTATCTAAACAATTTAAACAAGCA
TTACAATTCATGTAATTTATGCTGACGAAAAAGGTCATATTTAGTAATTC
TAGTAATCGAAGGAAGACATTTCTCAATCTATTAGCGTAGGCTAAGGCTT
TCAAAACATAAAGACTTGTGAAATGTATTAAGATATCACTTTACTCCAAG
GAATTTAGAATTAAAACAGAAACCTAGTCAGCAATTCGCGGAGAGTATAC
AAAGGGTATGCCGTGGGTTTATATCTATAGGTATTACTGTAATGCAAAGA
ATTTTTTTTTTTTGGGGGGGGGTAGATGATAGCATGACTCATGTGAGCTT
CGGCCTAAACAATCTAAGGGTAAAAAACTTGTAAAGCAACTAAACCTCTT
CTGTCAAGTGCAGGATCTGGGTATGAGACATGTTAGGTGAAATGTTTATT
AGAGTAGGAGGGTCAGCGTGTGCATCTAGCATGGCATTGTCAACTGAAGG
AACGAGAAAACGTCGAATTCAGATCTTCCAGTTATAGAGGTTCCAGTTAA
AGAGACTGTGTACTATTATCATACCTTGACGCATGCAAGCTCTTGTACAG
GACATGACTTTCTAAACGTAAATATGTAGAAAAGGTTCAAAGCTACGTGA
CACGTAGACTATGCTATAGTGTAAGACGAATCACTATCTAAGAAAAATGC
CCAAAGCCGAAGAAAATTCGCAAACGGATCTTTTTGCCGAAAAGAGTTTA
CAGTCGGTAGAGTTGCCAGTCTTAGACTATACGATTTTGGTACAAAATAC
AAAAACAGCCCAAGTCGTACGAATTCGAGTTTCCGTATGCGAGGCCAACT
GTGTTCGGTATTCGAAAAAATCAAAACAAAAAAAAAGAGGCGGGAGAGAA
ACTGAGATAAAAGAGGGATTCCAAGAAATATTATAGTTCTCTTTGGAGAC
CCTCTTCCTTTCATTCCCTTTGTAGTTTCTTGGAACTACACTTTCTTTTC
TTAGAAAACAATTTTTATAAACAGTCATTTTTTAATAAGCTAGTAATTTC
TTTGCAACAAGGATATCTATCTAAACTTTCACCTTATAAATTTCTTAAAA
AACATCAAATCATGTAAGTTTGTTTTTTTTTTTTTGTTTTTTTTTTGCCT
GAGGATTATATCCTTATGTTTACCCCTTTTATATATTAAAGTCCGTGTAA
ATAAAAAGCTATAGTATATTCTCCCCACTACCATTACTACCAGACAAAGG
ATATGTATACAAATCATTGACAGTTTTATAAACAGTTATAAATACTTGTA
ATTTCGAATTTGTGACTTTCATCGTAGTCACACTATGAAATTTTAAAAAT
TTTAAAATGGTTTTTAACAATAGAGCTTCTCAATAGTGCTTTTCTCTATT
AGTTTTCAGTTTGTTTTTCTCTTACCAGGAAATTAATAAACAAACTCATT
CAAACTTTTTGACCTTTTACATTATGGACACCGAATCAAAAGCACTACTT
CTGCTCCTTCTCAAGCACTATCAAAAGAAGCATAAAAAACGACGTTTTAG
CAAAATTTGTTTCAAAAACGCAATATCCCATCATCGCTCGTTAACTAGAA
GATTCTTTTTGTCATCCATCATGCGTACTTCTTTGCTACAATTAAGAGTT
CGTAGAGCACGTTCGTTATGGGCTTACCCCAGACAAGAGTTTTGGTTTTC
GCGTATGCAGGCAGATCAGATTTTTAATCATTTTTGGCGTAACGATTTTC
GAATGTCACGGGAGACCTTTCTGTCGTTAGTAGCACTTGTTCGGCCAAGA
TTAGAAAAACGTGACACACAGTTACGCAGAGCAATACCCATAGAAAAAAG
AGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACTTTTTTCGCAAA
TTTCGAGTCCCACGTAGGGTCCATTTTTCGAACTTCGGCGGAGCACCCCC
GTCGGTCGACAAGGGTAGTACCCCCCCCGGGCATTGGTGGCATTTCGTTA
AGGTGACTTGGTACAGGATAATACGTAGGTTTGTAACCTGGACCACAATA
ATTGTTATAATTCATTTTGCTTCGCTTCACAAACTCAACACTTTGCACAC
AGAAACAGTGCACAGCTTTCTTTGAAATGATTTGTGTGTGAGAAATCTTC
TCACGTTTATTTATATCACCACACCCACCCCATTATATTCTGTATGAATG
ATACACTACTTCTTTTATGGAAACGATTATCAACCAGATAGCATTTTGCA
TTTTTCTGAGAGGTCCATTGTTTTAAAATTCAAAACAGAAAAGAGGAGCT
CGGGGGCACCTCGAAAATGTTTTAAAATTTAAACAATGAAGTCTTTTGTG
TCTGGCTTGAGCAAGAGAAGAAAAAACTCAAAACTTTTCAGACCGGAATT
GATTTGAGATCGTAACTGAAAAGAATTTTGCTTCTACCTATTGTTATCCG
ATTTTATAAAAATTAAAATCTCTAGTGTGACCACAATGTTTCCTGTTTTC
TTTGATAAAAAAATTTACAGTAGTGGATGAAAAATCTTATGATAACTTTT
GCAGGGAAAAAGTAAAAAAGTTCCAGCTTGTAAGCTTTGCAGTATGTTGA
TCTTGCTTTGATTCTACCCAAAAAGAGACGTTAAAAAATGAGGATGAAAT
AGAAGAAAAGTTAAGAAATCCCCAGAAATTAGCTTAAAATGGAAAAGTAC
CAATTAGTAAAAAGCTTGAGGCAGATTTAAATGACAATAAATTTCTTATT
TACAAAAACTGATAAATAGGTAATTCAATCATGATAAAAAATGATTCTAA
ACTGTCTTCCGACAATACTGTATTACAGTCGCGACTAATTCCAGAAGGCT
GATGTAAATTTTTCCAAGTCATAATCTCAAATTATATCAGGACGTCAAGT
GAAAAATTGCATATCATGATAACATATTTCAGTAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCA
GGGCGTGAAGTGAAATATTCCAAGTTATAATCCCAAATTAAACCAGGACG
TGAAGTGAAATATTCCAAGTTATAATCTCAAATTATACCAGGACGTTGCA
AGGCATTTTCTCAAATAATACCATAGGACGTCGTGATGGCAAGTCTTAAT
CTCAATAATAAACCATCAGGATACTGTGCCAAATATTTCATTTCGGTTGT
GCTCTCTGCAAATTACTGCCACACATATTCTCATTATTTTCCCATGCATC
CCATTTCTGAATTTCTGATTCTTACCTAGAAAATTTAGAATAATAATCTG
ATAATTTTTACAGGTACGACTAGGTAACTGAACTTCTCGACAATTCAAAT
CAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAACACTGCCTGTGATTCATAGGATTCATAAGA
AATATACAAACTGACTTACCTACTTTGTTTCTCTGTGTCTTTTTGCTGAA
TGTCAGTATGTAGACTTCAGTTGAAAACAGCTTCTACAGAAGCATACTTG
AGGAATAAGTACTCCCTTCAGCTAAGTTATCTTGTAGTCTCAATAAAACA
AATGAACCAAGAAGAAAAAATCCATAATAGATCCATCTTGCATCTTGTCC
TTGTGTCTTCTTCCCTGAGACCAGCGTGTTTTTGATCGTTTGAACCAAGC
TCGGCCTTTAAACTTAGGCGGTTTTCACCACGGAGCGACTAACCAGTCTC
ACTGGTTAGNNNNNNNNNNNNNNNNNNAAGCAAAACCGCAAAAAAAAATT
TATGCCAAAGAGTTATCGTCCGTTTCTTCGAAACTCTCCCGCCGATTTTT
TTCCGTATATCGCCATAACGTCATACCGCCATTTTTCCGCCGCCTTTACT
ATCACTGTAACGGACGATAACATCGTCTACGTGACACGGTGCAACATCCT
AGTTAGGGGGATTTTGAGATCACTCGATTTTTTTAGTCAAAGCACTTGTT
AATACATTTTTAGTGAGTATATCAATAAAGGAGCCCGAATTATATGGGTG
CTAATTTTTTTTCGAATTTCGAACACTGGTGTATTTTGCAGGCCAGAATA
GAAAGTATCTGGAAATCGCAAAAATAAATAAATTATGATTTCTCGATATC
TATTAAAGAAAAAACATCAGTTGCAAAAACACCATCAAAAAGACAACACA
CGAGGTTGATAGTGGTAGTTCCCTACAGTGCCGTTAAAAACGCTTACCAC
GCTCATTGATTTATTCTTGGAAGCAACACAACATCGAAAAAAAAAACTCA
TACAAAAAAACTAGATTTTTAGGAAATATACAAAAAAACAACACCATATA
CATAGAAGGCCTCCAATTCCTTTCATCGTCCAATGTATTTAAAGCCAGTC
TATATACCTACATGTGAGCAATGCAATTTTTTACCCATCAGAAGACATTC
TTCTGTCATACTGACAATCAGACAAAACGGGTGCTTTTATGTTTTGATGA
TTCTTTTAAAAAATGCAATACACCTTTTCGACCGTAGCCGTCAATTGACA
CACGGGCATCTTTTTGTCCGTTTTACAACCCTAAAAACCGTCCCAGTCTT
TTTTTCACGCCTAAAGGCAATACACCTTTCCCGAGATGTTTTCGACTTTT
TTGTTACAATGTTTGAGTGTTTCATTTTGGTCAAATAAAACTCTGTAAAA
AAAATACGAAACAAATAAAAAAAGGATTATCTAAAAAGCTCTTCCAGTTT
TTGAGCTATTTTGAATTAAACTTTTATTTAGTCTACACAATAGAGCAGCT
CCAGGCTTTTATTTAGGTCTTACTCTTGGTCTATAGGCACTGCTATAGCG
GCCACTAGTAACCTCCACCGGGAATTGCTTATTAAAAGGTTTAAACATAA
TAGACAACTTTCACAAACGATGAATGAGCAATGAAGATTTCAAATAAAGG
AATGTTTAAAACACAGCTGATAGGCTTAGATTTCGAAACTCTCTATTGTT
TCATTAAGACCTAAGTGCGCATGCGATTTATCCGGAGAAATTTCAATATT
CAAAACAAGAGCAGTGCTCATATCCCGAAAAATAGGAGTTTCACGATCGA
AACGAAGGAAGATATGACGTAGCCTAACTTTTATTTTAAACAATAGAATT
AAATGAAAACGAGGCCGGGCTATACGTTTTGATTTTTATGAGACATTTTA
ACATGGATAAACAAAGCTATATACAGTGATCGAAAAGAGCTCAAATTTTC
AGGATTGATTCGTCTCCCTGGGGGGGGGGTACTACCCTTGCCGACCGACG
GGGTGCTCCCCTGAGGTTCGAAAAATGGACCCTGAGTGGGACTTTTTTTT
TTTTTAATTTTGCCAAAATTTGCGAAAGAGTGACCCTGAATGGGACTGAA
ATTCCAAAATTTTCTCCAATTTTCTACTTTCCCCCCAAGTTTTCCAAAAA
AGGCAAGATTTTTTCTATTTTGGTGTTTTTGCGAGCCTTTCTGGGACTCG
TGGAGGTAAAGAAAGGTACCCTGACCAGGGGCAATTTCATTCATCACAGT
ATGAGTCTAGTTATGCATAAAAAGAATTTATATGTTATATCATAAGTTGT
GCAAATCAAAGATTCGAGATTTTTAGATCTCAGTTTTGCAAACAAGCTCA
AAGTTACAAGTAGATGATGCATATTTGTTGTATAATCGACTGTGCAGATG
ATGACTTTATATAGCAACTTGAAAATCGACCAAGCCATCAGGATAACTTA
AGTAACAAATTGTATAAAAATATGTATTTTGATACAGTAACTGTTCTAGA
AATAGCATTAATTACGCNTTGTATAAAAAATAAAAATATGTATTTTGATA
CAGTAACTGTTCTATAAATAGCATTAATTACGCAATCTGACAACCACTTG
ATTATCAATGAAAACAGAATCTTAGATGATTTACAAGACTTTTACTTTAC
ATTTTCAGAGAAAAATCGGAGCTTTTTAATTCCTCTTAACTCGCTAAGTT
TAAAGACAAAAGCTTTACCGAATGTCAATTGAGTCCTCGGGTTCCACATA
GGGAACGTAGCTCAATGATAGAGCATATACCCGCAATGGCATGGTTATGA
GTTCGAGTGTCACCAGATCCGTTGGTTTTCCAACGGTTTTAGTGGCTGGT
CAGAATACAACATGAAATTGACTGTATTCACTTCATTGTAATACATAAGG
GCAAAATTCACGATCAAAGACAAAATACTTTTAACACGACTCATCGTGGA
GTATGTTTGAGGAAAGAAAAATCGAATTTCCAAAAAAAAAAGATTTCAAA
ATAAAAATAACCTGAATTCACAAATGTCTCCTGTTTCCCTGATTTTTTTA
ACTAAATACTAGATAATGTTCGTAAGCAGAAATGATCAACCCTCACTGTA
CTGTAGTTTCTTCACTCGGGCTTGTAGTATATGTTCGATTAAAATAAAAA
AAGTTCGAGTAAGTTCGATAAAGTCAAGTGATTTCAATTAAGTTCGAGAA
ACTTTGAGTAAATTCGAGAAAGTTCGGGTGTGTTTCAAAAAAAATTGAGC
GAGTTCTAAAGTTCAGAAAGATCGAAAGAGTCGAGAAATTTCAATAAATA
ATTTTGAGCATTTTTTGAAAATTCGAAAAAGTTCGAGAAAAGTTTGAGTA
ATCTCAGGTGACTTTTCGAGGAAATTTGAAAAAGTCAAGTAAGTTCGAGT
ATTTGTTCGAGAAAGTTAAGAAAATGTTCGAAAACGTCGAGTGAGCTCAA
GAACTTTTGCATAAGTCCAAGTGTGTTCGTAGTAAGTGCGAGAAAGTTCG
AATACATTCCGGGCAAGTTAGAGTAGTTTAGGCACTATCGATGTTTTCCA
AATGAAGATATTTGCTGTCTTTTGACATTATCTGAATCTAATCATTTAAT
TCCCTTTAGATGTGCTTCTGATACTTCAATGCCACCCTGTATGTCTCACA
GCCCCGGTGGAACTTTCTTCCCTAGATAAAAATTTCTATTTAAATCTCAA
TGTGGATAGAAATTCTATTATTTCAAGTTTAAAAAATCCAGCGGGGGTGG
TTTGGAGTAAGTTTTTAGACATTGAATTTCAAATGGGGATAAAATCAGAG
TCAATTTCTCATTAGGGCGGAAGTTCCAGGGTATTTTCCCAGTGGGGACA
ACATTTTTGCCAAATTTTCCAGTGGAACTGGGGTCCCAGCGGGTCTGTGA
CACAAGGGTGTTCAATGTAACTATTTCATATTCAAAAGATAGAAAAATGA
AGGTAATAAAGATAGATGGAGAGTCAATGCCTTTTGTTCTATTCTGATTT
ATCATCGGAAGCAAACAGCTGTTTGGTTGCTTTGGGAATAAGATGATTAA
TTTTGAAAGTATGAAAACCGCTGCTCACTTAGACGTGAAGATTTTAAGAT
AAGAAAATTTCAATGATAATGTGATGCGACTCTCAATGTTTACAAAATGC
CAGCCCAGAAATATATCCTTATGAAATTAATATATTCTTTTATCCTTAAA
TCAGTTGAAACTATTTCGAATCGCATTTTAACTAAGATTTCTCGCAAAAT
TAAGTTTTTCAAAATCAACGGACCAGCCTTTTTCTGTTCTTATAAATTTA
CATTTCGGATTTTTTTGCTTCCAATGATGGTACATCAAAGAAAAGCCGCT
TTGATTAGATTTATAAAAGATTTGAACGACCATATAGGTCACCGAGACGT
TTTCTCTCCATCTATATCTTTATTACCTTCATGATAGAAATAAGACTCAT
ATTTCATACACTGGAAAAATTCAGTATGTAAGATCAAATAACAAGTAAGA
TGAGATGCTCAGAGTTAATCTCAGACATCAATCTGCATTGCAAAATAAGC
AAGAAAATGCATAGCAATGTTAGAGAGTGTTTCGAAATAGTCTATCGACA
AACAATTGACAATGACCCTACGATGTCTGATTGTGGAGGATCTTCTTGAA
TTTTCAAATACATTATAGGGAATTGTCAAAATTGAATCTTCTAAAAGAAA
CGAGCTAATTTATCCCTAATAAAATAATGCAAATTTTCTAAAGGCATACG
ATAGAAGGTAAAAACAAATAGAAAATTATTCCAGGAATCTAATTTATTAC
TTTATATTTTCATTTTTATGTCACGGTTATCGTATACAAATAAATAGCAA
TGAATAGAAATAAATAACAAAATTTACAAGGTATGATCAAGGAACTTGAT
ATCATGATACTAAAATTATCTACAGAAATAAATCAATAAATTAACTATTA
CTTAAAAAGTACTAAATATCGTATAAAAAATTAATCTATCTTAACTTCGA
CAAATAAAGAGTCGTCCTTTAAAAATCCTTCAGGTTGCAATCTGTTCAAA
TTCATAAACATTGGACAACCTGAAGCAATGTTCATATCTTTCTTTGGTTT
CTGAAAGCTTGATGAATCTTTGTTTGGAAACATTTTCTCCACATGATCTT
TACTTCTGTCTTCTTGATTGATCAAAGTGAATTTGATTTTCTTTTGGAAA
GGCCATTCCAAAATGTTGTCATATTCTGATTTCATAAGAACCAAGAAAAG
TGACAAGTGTGTTCCTTTTCCCATCCCGTCACCGTGTAGATACAGCCTTA
AACAGAACTTGTATCCATACTTGCTCGTAAAGCAAGGGGCGGAATGTAAT
GCTCTTGTCTTGCCAATAATTGCATCAGTTGTTCGTTGCTGAAAATTGTT
GATCTTCCAAACAAGATGGCCGTCATTGACCGAGTTCTCATGGAGTTGGA
ATTTCAAGTCAAGATCTGCAAGGTTTTCAGTGTTGTTTTGTATCTGCTCA
ACCGCACCTTCTTGGACATTTCCATCATTGTCAGCTCCTTTGATCTTCTT
GGATAACTGTGCCATTGCTTCTAATANCCCATTATTGTCAGCTCCGTTGA
TCTTCTTGGATAACTGCGCCATTGCTTCCAACAGGTCATTATACTGTAGT
CTAGACTGTTCTTCGACAGCTTGCAGTCTCTTGTTCAATATGTCTACAGT
TTGTTTGAGTTGTTGATTCTCCAGAAATGTTTCTTGATATTGCTGGTTCA
TCCCTTTGTTGAATTTGTTGTTCGTTGGATAGAAGTCAATGCTCTCTGAT
CCATACTTGTCCATATTTTATGATTTACTTGTAACTTCTTTGTGCTTCCC
TTTGCGTTTATGTAGGTATGCTTTGACTGCTTACTATGTTTGATTTGATT
TATAGACGATCAAAATTGTCCTTTTATATATTTTGCATAAATTTGCAAAC
TGTACAGAATGACGTATTTCAACCTAACATGGAATTATTTTATTATCATT
GTTAAGCCGTAGTTGAAAACAATAAAATATGTGCAAAGAAACATAACAAT
GTGATACCAATCATCATGACAATACCAAAATAAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048046-exon-scaffold_14-1575043694:748984..749364 | TCONS_00048046-exon-scaffold_14-1575043694:748984..749364 | Clytia hemisphaerica | exon |
| TCONS_00048046-exon-scaffold_14-1575043694:732578..733631 | TCONS_00048046-exon-scaffold_14-1575043694:732578..733631 | Clytia hemisphaerica | exon |
| TCONS_00048046-exon-scaffold_14-1510915933:748984..749364 | TCONS_00048046-exon-scaffold_14-1510915933:748984..749364 | Clytia hemisphaerica | exon |
| TCONS_00048046-exon-scaffold_14-1510915933:732578..733631 | TCONS_00048046-exon-scaffold_14-1510915933:732578..733631 | Clytia hemisphaerica | exon |
| TCONS_00048046-exon-scaffold_14-1491911889:748984..749364 | TCONS_00048046-exon-scaffold_14-1491911889:748984..749364 | Clytia hemisphaerica | exon |
| TCONS_00048046-exon-scaffold_14-1491911889:732578..733631 | TCONS_00048046-exon-scaffold_14-1491911889:732578..733631 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:732578..749364 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00048046 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.470e-50 Identity = 80/164 (48.78%), Postives = 123/164 (75.00%), Query Frame = -1
Query: 332 LADLDLKFQLHENSVNDGHLVWKINNFQQRTTDAIIGKTRALHSAPCFTSKYGYKFCLRLYLHGDGMGKGTHLSLFLVLMKSEYDNILEWPFQKKIKFTLINQEDRSKDHVEKMF-PNKDSSSFQKPKKDMNIASGCPMFMNLNRLQPEGFLKDDSLFVEVKID 820
LAD+DL+FQ+ E + +G L+WKI ++++R +A++GKT +L+S P +T +GYK C R+YL+GDGMGKGTHLSLF V+M+ EYD +L WPF++K+ L++Q S+ H+ F P+ +SSSF+KP +MNIASGCP+F+ L+ ++KDD++F++V +D
Sbjct: 399 LADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQ-GSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVD 561
The following BLAST results are available for this feature:
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