TCONS_00048108 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048108
Unique NameTCONS_00048108
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length810

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048108 ID=TCONS_00048108|Name=TCONS_00048108|organism=Clytia hemisphaerica|type=transcript|length=810bp
ATCACGTTTGCACGAAAACTTAGAAGGAAGGCAGAAAAGAAAGAGCGGAA
GCCACGTTATGATGCGATTTGAGAGATTGACGTCACCGTCCTTTGATCTG
TCAATTGAACCGTTTGAACACTGATACAGATGTTGAAAGCTCATCGGAAG
TCGAAGGACAAACAACATACAATCCTTCGTTTGAGGGCAAGCAGTCAAGC
TCCGCCCAGTCAAGTCAAGCTACCAATATTCAAGTGTCCTCTCCTCTACA
TCAGATTCACCCTCGCCGCTCACTGGGTAACCTCCGGAACATACCATCTT
GGAATCGAAAACAACAACAGCTGGCTTCCTTCTCATCACTTGGCATTATG
TTTTGATTTCATCTTTCATTCGAAACTTTGAAGAACGCTTATTGTGAAAG
TGGAGTTAACGAGTGCTACCCAAAGACGTGTATATATCTTATGTCCTATC
ACCAATGCCGTACACAAGTTGAGATACACTCATAgacgttttaaatgttt
tcgaACTCATCAATAAAGAATACTAATGACAAGCCTTGATCAGAAAGTAT
TATAACGCGTTCACCATACATTGATTTAACATCACCATCATACTGACCAA
AGCGCACCTGGTGCTTTCAACGAATAGCAGTCTTCAATTACACTTAACAT
CCGCTATCGTGCGTTAAAGAAATGTTTGGGAAACGTTTGGGAAACGTTTT
GAAACAGAAATTTTGTTGCGTCCAAAGAAATACCAGGTCAGGGGAACGCG
AAGACGGATCAGTCCGAAGTATTCCGAAAAAGAGATAACGAATCTGGTAG
ATTGACCGAA
Run BLAST on NCBI

transcript from alignment at scaffold_140:216806..237518+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048108 ID=TCONS_00048108|Name=TCONS_00048108|organism=Clytia hemisphaerica|type=transcript|length=20713bp|location=Sequence derived from alignment at scaffold_140:216806..237518+ (Clytia hemisphaerica)
ATCACGTTTGCACGAAAACTTAGAAGGAAGGCAGAAAAGAAAGAGCGGAA
GCCACGTTATGATGCGATTTGAGAGATTGGTAAGTTTACTTTCCTGATTT
TCTTCtaaagatttttttccaaccccctttTTATTCTTATTTGGACATTG
TGACTGTTATTCTAGAGCCAGCCAGACCAGTCAATGTCACTGGGTTCAGA
ATAAGTGGGGTGGGTGATGGGCACATGTTCGACAACCCATTTGTTCGACA
ACTCAATGATATGATCGACAATGTATAGTtgtttgacacctaaaaatctt
gtttccctgtgtattatctttttcttttttctcagaaTAGTATATACCTG
ATATTCTTATTGTCTGGTTTTTGAGTGCGAAAGATTAACTTTATTAAAAC
ACAAAATGTAAGGTTCCATTATGAAACCAGTATAGCTAAAGCCGCTGTGG
TTtttagtggtcattgaccttggttgctgcacaggcgactgaggttttAT
TCCCACTGCCAACGGTTCACTTGGAAAGTGAATGAACGTATGCTGGGTCA
ACATGCCATGTGATACatcgtttaggagtctcgcctcctccaccgtgttc
caccgtgaaaacggtaggtaaaaatgcgcacttttatagtactgtggaag
gttagaggaatgtaaacattgtcaatttttttctttcctttaaaaagaat
gatttatatatttgaacatgatatcaatgataattttatggatctctcct
gaaaatttcacaaaaattcatctacaGAGGAAacgaagttatgattaaaa
gtgagttctttacctaccgtttttctgctggGTTTCCTCATGAAAACCAA
ATTTTTACCTTCCATTTTTTAAGCTCTCCCCGTAGTTTCCCGCGatcact
aaaatcaaaacaatggaaattgtttggacgcatgcgcagtcgacactact
aAACGGTGTAACATTGGGTAGTCTTTTCAAGGTGCTGACTGAGCGCTAAT
TGAAAGCATCTATAACTATAGTTGTGAAAATGAACCTctaagcctcctgc
aactcaaccaaatagaaatagaaatagacaTAGAAATATTGTGGTTCATC
TTTGTAAAGTCAGATAACCGTGACAAAGTGTTTTCCTTCATATAGCTGTA
CAAGGATAATAAATGACATAAATCATAATCTCtgcaattttttatttctt
ctcaAACACTTTTCATCCTTATATTTCattattagaaaataaattattta
aaaaaacattaacattaacattatttAAACACATCATTCATTgtatatat
tttcattatttcaatcctagatttttttatttttttttagtatttcttta
tttttgtattatctttttttttatattcaatgagaataggttttgtaaaa
ccttctatgaattatcaaatagaaatagaaatagatattaccagacgatg
tcaatcgaactgaacttatcaaactcaatcgaacttaatcaaagGATAGG
TGTTTGATTACTGAATCAAATTGAACAGTCATTGAACAGAGAAATTCTGg
taaagtttgattagtttgatcgATGTTCAATGTGTTCAATTAAATACGGT
TTTCATTCACAATCATGCTCAGAGCGCATGAACAACTCTTTTCTGCTAAT
CCGATGATTATTGGAGATCGTTTAGGCTAGAGCTGTTGGGCTAGCAATAA
ctggaaccatttgagctacaaaaacactgatcaaacttaatcgaactgcG
ATAAGTAAAATCGAGCTTTAATCaaactaaagatttttccaataaAGTTT
TACTGTTCGATCAAGTTTGGTAATTGAACAAAATTTCGTTgaatgaaatt
tgatggttcgattACGAAAATAggtttgatagggttcggttgacatcgcc
tggaTATTAGACAGGAATCTCATATTTTTACAACTTTGTTGTCGCCAGAC
AACCTTGTTCtttgcgtattatcagcttttttatgcttactgataaaCTT
ACTGTCAAACTGATGCACTGTTGAACAACTCATCGCTTAGTTGTTCAAAA
AATGATTGTCAAACAAGTGTTTGTCAAACAACCATGCAGTTGAACAACTG
GATGTCAAACTAATAACTGTCAATCAACTCGTCTGTCGAACAACTAAGTG
ATCATTTGTTAGACAGTACATCTGTCCaacattttaaaagatttgtcaAA
CAAATACTGTCAATCAAGTGGGATTTCCCCAGGTGatgtcctgggtagaa
aatctttgaaaaattaattagtgtGGGGACGTTTACTAGTTACTCCAGAT
AATAccctaccgtaagttggtctaatgtggACACCTCTCATGTATAATTC
TAACACACTCAGAGTTTTGATCAAATACCTTCCATAGGAATtactgattg
aaaaaagatgtTCTCCTCTCTGACGGTTTAGGGCAGTCCTCAacatttca
tcaaaatcacatTTTTCTCTAACTCATGGCAGTTTCAAAACTCGCACAGA
GCGAATCTTTAGAATTTCGCGCGCactttaaaatgtaaacattgcattGG
CAATGACTTCATTTAAAATCCGGCGGCTGTCACACCAACTTTACCATTTT
TGTGGAAAAAAGActataaatcaaaccaaaatgcaaatctttttgtttct
tttcataACTAAAGCCCTTAGCCATGATAATATGCAAAAAAATCTAGATA
TATCTGATTTTTTCCTTAGGAAATTGAGGATTTCCTAACAAGTGACGTAA
GTGAGCCCTCAGccgattttcatcattttccctGACCGATTAAGAAAAAA
AGCGAATTTTCCTGGGAAAAGTGTTGACTGTTCCTGAGAGACTCCTTTTA
GctgcattttgcaaaaataattaGGGTTGAATCAtttgttttctaaaaat
taTCTCGAAAGTTCTAGACCAaccatttcaataaaaacacgaaAGTTTTG
CCAGAAGATTCCAATGTTTGTCGCCTTATTTATTTACATGTGGCATTGCA
ACGGCTTCTTTGATCCACAACCCGAAATAGCATTATTCTTTGGTTTAGCC
CCCACAATTTATCACAATGACCTACAAGGCGAGCCAAAAACTGCTACTTT
TGCCCTTAAAATATGAATGTGGAACAACTTAGTCTTAATCAAATATATCA
TAACATATCCAAAGTGTAGAAGGAAGAGGATGAGGAGTCTCAAAAggaga
aattttgaataatcAAGGGGAATGTAAGGTGCAAAGCTTGCAAATTTTTC
AGGACTCGGGTTCAGGCTTCAAGCCAATAAATTATACCCAGTACCAACAC
TTTTCTTTCGAAACATGGTGAAAACATactttctttagaaaaaaattttc
cctatGTTTTAgccaagtcaaaaaaaaactaagACATTAGGGATGAAAGG
GGTCTACAggcgaaaatattttcaaaaagggcAGCATTATCTCAAACTTC
TATATTGAACCAAccatgattttttatgaaaattaaacAATGGACACAGT
GGCTTTAATATCCTGTTTCTGGATTAATAATAGGTAAATTTGATTAGTTA
GAAAATGAGaaggtttttttaaatctgacaaAAGATAAGAATTATCATTC
AAACTTTTATATATCCAAAAATGTCAGGAAAGTAGACAAATGCAGTAGGA
CGTTTTAAAAGAAATCAATTTGAGGGCAAGAAGGCGAGTACTGTGACACA
TAACAAGGACATtaattttcttcataaaattaaTACTTCAGGAAGAACAA
TAACATGAATAAAGTTTTCATCTTAAAGTACtgtacacgtcttttttttt
taagaaactagttttaccaagcagcctcaatgtttcttaagaaatcggcc
ttttgagccttaaatgtttcttacatgtttcNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNttaaaaaatgttattttctcattctcagcctcagc
atgtttcttagatgtttcttagtttttaggcgttctgagcctcatgtttc
ttaaaagtgtgtttcttaaaaaaaaaagacgtgtagtgTTTTTTCAGTAA
GTACTAtaagttttaaaaacactaaagtaaaaatcaacaaaattagGCTA
TCATTGTTATAAACATGTTTTCGACTTACTTTCTTTAAATTGGAACCCTc
agaatcaattttaaattttgcgaaagACAACTGTTTAGGGAAAATACGCT
TGTAGACGACTTTTCTTGACTTACATTACCTTTTTGAAACTTATATATTT
TGCTTGTTAAGAACAGTTAATTGTTCTTCTTTGAACACCATATTTTACAT
TCCACGATAATACTACTTTAGATAATATATTATACAAGTCCAATATTTCA
TGGTTTTCCATCTAAATGATTTACATTCCATTCAGGACTTCGTTCAAAAT
TCAAACCAAGTCTGGGTTATTACAATATTTTGAATGTATTGGCAAATTTA
ATAAGGATAATACTATTGGGAATGCTCAAAATATAATGGAGTTAACAAAC
ATGAAAAGAAGATATTCCAGttctttactttaaattttcagaatAGTTAA
TTGTCTTGATATATTTAAAATGAACTTCTTCAGCTGAGCTGGGAGTAATA
TAAAATTTGACCATTCTCAGTTCAAAGGGAAATACAGTTTTTCTGATGCA
TCTTTTGTGAATAGTCAGCACTTGAAAACATTAGATTTGCCTATATTTGC
TGGATCTGGCGAAACAAAAAGGCTTTCAAAAAGATTGTTTAAGttataaa
atttccataaatgAACCTTTGGATTATAAGTCGGTAATGGATATGAAAAA
TGTATTCAAATTAAGTATGTGTTGAATCAGAGTGTTTTTTTAGATAACTT
TGAAAATACTTACGGTTTGTTTGGCCAGGTTTGGCTGTTAGATTTATATA
ATagagccaaatttgaaagttaaCAAAAAAGAGAGTGCGAGCTTGGACCT
GTTATTATTAGTCCTTAGCTTCAAAGGATCCAATGGTGGAATGAAATTTA
GAGTATTTATATGCTAATTTGGATTAAAAGATCAAATAAGTCcctaaaaa
taaatattcaattCCATTAAAACCCTaaagccccaggggggggggtagaa
tctaccacgctggagttcttttgcgtatatctcggagaaaatttttttaa
acgacttgaaactttctgacttttaacaaaatcttattaagagtatttgt
gcaaaattttagggttatAGCTTGTCCAGATcaagttttatgactttatt
gtgaaacatgacataaaacccagctaaaatcgcttaaaacttaaaatttt
aaagtgctgataacttttaaactatttattcaaccatcttcaaattttga
cacgtgataggtattgacaatataaatttgaacaattagaaaaaaaattt
aagaatgatgacgtcaatatatgatgtcatcaaattttgaaaatttaact
catcttcagcacagattttaagataaaatcTTCATGGAAACTGCAAAACc
agcaattatgttaaagaaaaactttttatctctcagaattttcaaacaga
atctaaatatcatTATTGATTCGATTGTAattgacatttttgtaaaccat
aaaTTTTGGCTTTTTGCCGACAGGTTGAAATTTtgggatgacgtcatcgg
tttttgaatgacatcatcaaattttcttttgttccagGATATTtgtgtca
tgatggagaacatctgtaccaaatttcatgaccgtAGCTCtcctagatca
aaaataatcgagggtggtagattctacccccccccctggggatacaaaag
taaaaaaagcttggggctaatagggtttaagttacttgtttgttttgaaa
taatggCAAAGGCATTCCCAATGGTTACACAAGGTTCCACCCCTTTaatg
taaatgttttttagttttttttcgaGGCATTTCCATATAGAAAATGAGAT
GGGATATGGTCAGATGGCCCCActtgctgaaaaattgaaacatttctaAA
AAACCTATTTTACGTACCCCAAGATCAGTGGGTTTTCAGGGTAGGTTGTG
TCTAAAAAATCCACAAGTCAAAATTTCTACCCCCCCTTGAAATATGagtt
attattttgattttaggaagAATTCTCCTCCAAAACTACACTTAATTTTC
CTGAAATTTTATCTCCCCTGAAAAATATGCATCCAATTTTTGCTGAGaag
acaaataaaaattttctttttaagataAGCAATGGTTTACTTGAGACAAC
AGGAATAATATTCCTTCAAAATTTGCAACGCTTTACCATGAGAATACAGG
aaagattttccttgaaaaatacacatTGATTTAAGAAGGAAACATTTTCC
AGTATTTAATTCCCTTATACAAGTATtgtaaaaaagagaaatttaaacat
ttttgtgtttatcttgttTAGATTATTCTTATTTATGtatcaaaattgtt
aaaaattctTGAGTGAGTGTTGCTATTAAATCTGCACTTGTTTAACTTTA
TGGTAtgttcaaaaaaactttagctaaaaatagacatggTCATCTATACG
TCAAAAGAAGCGTGTTAGGATGTAGATTTCAGAATTGGCtgttaataaaa
taattttctttttgagaaattAGGTCAAAACTGATTCATGCAGGGGGGGT
AAACAGTTAATACACAACACTATGTGTAGTAAttgctttttgaaattttt
caaaaggacTACCACCCCTTTACACTTTGTACACTGTGCACTGTGTATTA
ACTGTTTTGACCCATTAATATACACCAACCCCAAAGTGAGTCTGCAGCGA
CCGAAAAACCGTACCATGCAGGTCCACTGTGTATTTTTTTCGTTAATTTG
ATGCAATACTGTTTTAACTGTTTTGAAACTACTTATGTCACATATTTATC
TCATTAGAAAAGTCTTTGTATGTCGGGGTGCAAATCCCTTGCCAGACAGT
TACCTAAGCAATGCAAcagttaaaatttttagattttgagtaagcagaaa
aagattttgaggTTTTCCAGTTGCATGGTTGCTTAGTTTTAAATTTAGGA
AGTgccaaataataattttaaagaactcttcATGCAATCAGATGTGAACA
GAATTGACCTCAAACATGTCAAATTTTTAAATCCatgttttttgaaggaa
aatcaaaaacctgttttccAGAAAAGCCAATCTTGTACTTCTCAAGtgaa
ataatataataaaaatatatgaTATTTCTAAAGGTAGATTTGATTTTCAA
TGTGTCTAAATCTATTCTattaaccctacctactgagagaGGGGGGCACA
AAGTGCCCCCCCTGTTAGAAAATTGGCTGGCATTTTTAAACTAATGAGGC
TATGAAGCTGAAATTATATgtcttttcatcaaattttatggggaatgttt
tggttaataatttgttttgattggtcaattATTTTAGTCCCAAGGACAGA
TTTGTCTGTGACCACTACCATCCCACAACTGCAGCACAGgctattttgct
cttttttatgtTCTTAGTCCAAGATACTATAACATGTTACCAGGTATACT
TTAATAgtccatttcatttgtattgCTTCCATTTCATCTTACAGGACAAC
Tagcagcaaaaaataaatataaatatgacaaaaaaaagtatcaccgactt
gaaaaagttgaaatgctcTGATTTTAcgcggttttgaaagtttaaaacat
tttattcggttttggcgcgctatagtagaacgtcacgacaaaattgttga
tttaaattttaatttccatttagtacattgtaaaagctttcaaatGAAAG
CAAAATGAAGGAGAATGTGTCTCCATCTGTTTCAATGGCAACTTTaagaa
acatcatttttttgagttttttggatgatttttgcCAGTTGTTGatacaa
ttgatgacgtcatcaaaaattgcattcaattttcaaaaattttttttgat
aaatttgtttgttataGGTTTAGGCATTGCTGTACCAATTTTCATGACCA
AATAATGTTCCTATCCTAAGTTATCCACGGGGGGCACTATGTGCCCCCCC
TTTCAGTTCTAAGGGAGCCAAAtagctctcagtaggtagggttaaaagat
gaaaattttagtCAAGTAAAACAATGCCTGAATTTCTAGCATGGTAAAAA
ATCAGTCTTCTAAGTCAGGAAAAAAGTGACTTATATTGATATTTTCTGTC
TTTCCCAGGAAAAATTACGCtgtttttccaggaaaattactCCTCTTTAT
CAAAGGCAAAATTTAATTCAGTCTTTACAAAGTAAAGTGTTTTTTATGCA
AATGCTTCCTTGTATTGTGTGGAGATACTGAGTCTCAGACTTGAGGCCAT
AGCTTCTGACTGACTTATCGAACTAGCTCATTAAATCATCATGGGACTAC
CCACGAGCCACGAACATTTTATACAAACACTATTAACATTTCATCACTTA
ATTGTTCTTGAGGAGTCGAAAGAATTTATCTCTAAAAATACTGCAAAACT
TTTCCAAAATACTCCATGCCATAACGGTTAAGTTGTGATTCCATATCGAG
ATACTGGATCACTGAGACAGTTTTAGGAAAGCCTTCTTCACAGTCAATAT
TTTAGAAAGTAATTTTGACCTTCATCAAGTGTTTTCAAACAACCTTGAta
catttgttttttaaataactccagtttggctaaaaatagaaacatgaaat
ttggactaagttgcacatcattaaaaagatcattttgcaaaaaaaaactt
ttgaaattttgctgacatcagcactttTTTGCAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
AAAGGAGTTCGGAAATGGCTAATCCCTCTTTGGATCGGGAAATTTATCGA
GAATGCAACGAGAGAggcataaaaacttgaaattctttaatacttgtcaa
gaatatattttccataacaaaaccagggagggatttttgtaaaaaatctc
tCGTGTCTCTCCCAATCTTCCACAAAACTGTgtctttgttttgacttttc
agcatcaattcCTCAACAATCAACATTTCTTACTTCGAAAATTCGACACG
TTTACAGCTTGACGATAATTGAAAGTCGAGAAGTTTGCCCCATTTAGTTT
TTGTtgtaaaaatgttgtttcagaccATTCATAGCTTAAACCAGCATGCA
TTTTCTCAtctatgcatcgaaacaaaaacatcgaaaattgttatcaatct
gatagagaaacgcaataatgaagaatttctttctcaatcgaaaaaatcca
atacatcttctttttctgtgtatAGTAATGTATAACCatttcacatctct
gaaaaagctgctgcatttattttgaagcttcgggatcgaaaaatgttttc
tttattttgatgttgatattttcggcgggaacttgtcgaatttttttgtt
cgaatctaacaagattttcgaacaaaaacattcgaaattatagagacgga
ttcccgagttatttttttccgaGTTCCGAAAAAAAACTGAGTTATCCcga
gtgatgacgtcatttttggaataaagtgacgtcatttttcattttgtaac
tcgtgatttttgcttcctttagctttcgagttattttttattttctaact
cgggaaattgtgcttcctttaactatccgagttatttttccttttttaac
tcggtaatttttgcttcctttagctttcgagttattttttattttctaac
tcgggaaattgtgcttcctttaactatccgagttatttttccttttttaa
ctcgggaatttttgcttcctttaactttctgtaAGTAGATTTACGTTACA
CTGATTGGCCTCATAAAAAGGCTcgcctcgtaaaatatttctcgtattga
aCTCAAAGTTTTAGGGCCAaagcaaaatgacgtcatcgtcaCAAGATTCg
cagtattttgagttttgatccgttttaagttgtaatttttagatttatgc
aattttagattttcgttcggattttttttgtgatttgtgattttcgggaa
aaaagTACGATATTCTTTCGAGCAGTGGATTGATAGCCTCCACCTCTTCT
TATATAACTAGTGGGCTCTatagaatccctttcgctttgcgaacacgaga
ctcgttctccgtgcgtaaccccttttacgattgattgAGTTAACATTTCT
GAGATTTTACATGAATCATTCCAAGTTATATAGCTACACGTTTGCAAAGT
TAAAAGTAAATGGAATGAATAGTTTTTGAGATATGACATTTTCGTGACGA
ACTCCAGGGTAGAAAAACCTAAAAGGCACCGATTTAGCCTGTAAAccatc
tggttctcataaatACTATTATATTAGGGCACCCAAAAATCAATATGGCG
TATTTTCTACCAAAAGGTGGCGCGACGGCGAGTCATTGCTTGGTTTAATA
GACTAAGTAGCTGATTTTAGATCTTTAGAACTGAACTGAGAGAATCAACA
AACCAGAGGCTTATTGTATGCAATGTTCgaaaaaactcaatttctcGGTG
AAAGTTACTTATAGGGGAATGTCAAGGAACTGCGACAGTGACTAGACCAC
CAAAAAACAGCCATATCGAAATAAGTAAAGACAAGATGTGTTTACATACA
TAATGCCCttagaaaatatttcatttgtttgtttttttggaactCGTAGa
tcataaataaattttgtcttCTTTTCCCTTTGCAGACGTCACCGTCCTTT
GATCTGTCAATTGAACCGTTTGAACACTGATACAGATGTTGAAAGCTCAT
CGGAAGTCGAAGGACAAACAACATACAATCCTTCGTTTGAGGGCAAGCAG
TCAAGCTCCGCCCAGTCAAGTCAAGCTACCAATATTCAAGTGTCCTCTCC
TCTACATCAGATTCACCCTCGCCGCTCACTGGGTAACCTCCGGAACATAC
CATCTTGGAATCGAAAACAACAACAGCTGGCTTCCTTCTCATCACTTGGC
ATTATGTTTTGGTAAATATTTGATATCAACTTTATCCTGATTAGATAAGT
CGAGAAATCATTCTCTTGACATTAGCTCGTCCAACCCTCTTTCTCTCTGT
GTGACCCGGTAATTATTCCCGTCCACGCATACCTTACTGACCCGGCGAGA
GTTTCCGGTTTACTCTTTTACAGTGACACCATTGATTATGTCGGTATATC
CTTATCTCATTAATACGCTGATTTTATCTGTATCTGCATACCCTGTCTCG
ATGACGATTCAAATATTTCCTCTACCATCTTTTCCTGATAAAAGTTTTTG
GACTCGATTGTCTTAGTGACACGATGAGAATTCCAATCCAGCCTTGTCTT
CCGACCCACTGGTTATTTCCGTATGTCTCTGCTTCGCCACCGCCTTATTG
AACCGTAAGAAACTTTCGTAAACCAGGCTAAGAATATTTGTACACCCCTG
TCACAAACTGAGAAATCATTGTTATTTCAATCCGGGAATGAATTTTCAGG
TCTTTTTATTATCAACTACATTAATTTTAGGTGCTGAAACTTGTATGTAA
GGTCATTAGAATTTAGAATGGATGTTTAAAACACTTAAACTTAAAATCAT
AGCAgctattaaacaaaaaaaaaatatcgataaaaagcACAATTCCAAAA
TACACCATGTAAATTCagtatattttctttatttccttCAGTTTTCATCT
TTCATTCGAAACTTTGAAGAACGCTTATTGTGAAAGTGGAGTAACGAGTG
CTACCCAAAGACGTGTATATATCTTATGTCCTATCACCAATGCCGTACAC
CAAGTTGAGATACACTCATAgacgttttaaatgttttcgagtaagttttt
tttgttaaaaccaGTGCCTGTGTTTTTGTAAGGAGGCCAACAAGGTACTG
CATATTTCTTGTACGTAGATTGGACAAGCGTGGAGTGGCTTTTTATCTTA
CCATTNTTATTTCCGTATGTCTCTGCTTCGCCACCGCCTTATTGAACCGT
AAGAAACTTTCGTAAACCAGGCTAAGAATATTTGTACACCCCTGTCACAA
ACTGAGAAATCATTGTTATTTCAATCCGGGAATGAATTTTCAGGTCTTTT
TATTATCAACTACATTAATTTTAGGTGCTGAAACTTGTATGTAAGGTCAT
TAGAATTTAGAATGGATGTTTAAAACACTTAAACTTAAAATCATAGCAgc
tattaaacaaaaaaaaaatatcgataaaaagcACAATTCCAAAATACACC
ATGTAAATTCagtatattttctttatttccttCAGATTTCATCTTTCATT
CGAAACTTTGAAGAACGCTTATTGTGAAAGTGGAGTTAACGAGTGCTACC
CAAAGACGTGTATATATCTTATGTCCTATCACCAATGCCGTACACAAGTT
GAGATACACTCATAgacgttttaaatgttttcgagtaagttttttttgtt
aaaaccaGTCCTTGTGTTTTTGTAAGGAGGCCAACAAGGTACTGCATATT
TCTTGTACGTAGATTGGACAAGCGTGGAGTGGCTTTTTATCTTACCATTT
CGAAATCAATATTACACTCCTTTTTTATAAATCTTAAACCTCTTACATAT
TTGATAACGAATGTGTTTGTGTTGAAACTATTATCCTTAAGATATAATTC
AGAGAGATTATTCTAGCTTTAGGCTCAAAAGATTCTGACACAGTTGCTTC
TTAAAGCAGACAAAGAGTAGGACTGATTCAAAGTTTCCTTCTTTATTTCA
GACTCATCAATAAAGAATACTAATGACAAGCCTTGATCAGAAAGTATTAT
AACGCGTTCACCATACATTGATTTAACATCACCATCATACTGACCAAAGC
GCACCTGGTGCTTTCAACGAATAGCAGTCTTCAATTACACTTAACATCCG
CTATCGTGCGTTAAAGAAATGTTTGGGAAACGTTTGGGAAACGTTTTGAA
ACAGAAATTTTGTTGCGTCCAAAGAAATACCAGGTAAAAATATAGTTATA
GACACCTTCCTCTCTCAGCCAGCGGTGGTAAAATCAATGGACAGAAACTC
GAATGGGGTTGATATTCCTATGTTTTTTTGTGGTTGGACTTTGAATTACA
TTGTTTTCAAGACATAAAATCCTATGAGATACGCAACCGTTCCTCCATTA
CATATTATAAAcactttgaagattttgttaGCTTTGATTAAGATTTTAAA
ACACAGAGACGAATGAAGATAGATCATCCATTAATGACGAAGAAAATAGC
GTCATCCTTCTAGctgcggctttcttatactatttGGTATCTTTGTAACC
CTTTAATAGATTCTTGAGGTttgaccaatgaagtataagcccgaaaggct
agaagtAAATCTCCTACATAAGATTTGAAGCTGCTAAATCCTACCTATGC
TGCCCGGCGCGGCCCGGCCCGTTGTCAAAGCTAGCGGTCTCATGAACTTC
TAACGACTGGACGGAGAGCTCCTCATATATGCGCGtagttttcattgttt
caaataAATAGGATGATCACGTTCTGTTCACGTGATATTGCGTCAGAAAA
AGTCCAGGTCTCGATAACCCAGTTGTTGTGATTTGTATGAATGTCGGgca
aaaaaacaatctttttcGAAAGCACTCTGCTCCCACCATCAGTGTGAAGT
GGAAACTTTTGacttttacaagctttttcatcaaaatattgacAATATCt
attggaaatcttttaaatacaGATTCACGTCCAAATATAAAGGTAGGata
tatttatttcttttttctatgaAAAGAGAGGGAAAAGTATGTTGTTGGAA
TGAGAATGATGACAGGCTGATGAGCTTTCTTCATACTCTGACTCTCTAAc
taaaattattaattttttttttgattttcacaaATCTTCCCTCTTATACA
TTAATGATAGTACAGGAAACAATTTAGCAAATGTGCTTTCGAAGAACTAC
TTCTACTACCTTCACTGTCCTTCACTCAAATGTATAGAAAATTAAATATA
GCTATACCTTTTTGCTACCTTGTCAAAACTGCTTTTTTTAAAGAGAGTAC
ATTTTTTTACATTTTTAGGATTCTCATTCTGTGGTGTCAACAACAGAAAA
TGGTTATATCCACGACTAACATTTATTCATTGAACGGGATTTGTATGTAT
TGTATGAGGAGCAGATGAGAGACGCTGATGTCAAGAAAGATGGAATTACA
TGTCTTTACGATATATCATACGTTATGATGTTTGACGTTACTCCCCAGCT
GGATTGATCTAAATCAATGTCGTTAATCAACTAGTCAAATTCTAATAAAA
AGCAAAGCTTTTAAGAAAGTTCGTTATTAAATCTCTCACAcatgcagaaa
aaaatcgataTGCATTTCTTTAAATTGACATTATAATGACAGGACTTATT
TGGAAATGAATTTCTAAATTGAACATGTGATAGTTTGGTATATTATATAT
GACTTTCCTGACTATAATTTATGTCAGATTGGTCAAACTTtgttaaaata
ttggaaaatacACATGAAAGACTGAAATGGAATGATGGTcagcttttttg
ttattttgtttgcTGACAATATTGACACTCCCAGCAATGGTAAGGTCATA
GCTGCACAATGACCAAAATTTGTACGTGAACATAAATTGGCAGTGACTCT
GGAATGTAGtgacaaaaatcaattttatttcaaaagttttgattgaattt
tacttATGTTATTTAACTGTAATTAGGATGATTTTAATTTATTAGACTGA
AACAAAGATTAAtttcaaaagctttagaaaaatattgGCGTCCAAAACAA
CAGTGCTGACATTCTGCTGAATGTgtttaaattttactttaattttgagG
TGGTATTTCGGTTAAGAAAGGGCtgaattttattgatttactaattttat
gtacaatttttttaatgtttacagGATAAATCTCCATGCTGTagaattta
atcaaattaatttgataaaagtgtaCACAATTTGATCAGTCTTTTAGATT
TTCACAAAGcaataaattacagtatttcaaAGACCTAAATCATGTGAGTG
CAtcatctttttcaattttacaacTTCTGAAATGAAACCTGTTTAATACC
acatttcaacaatatttcacaattttaatttagaaaatttttggccattt
aaaaaaaaaacacctaatttttcagcaaaagttttgTACAAGTTAATACc
tcaaaattttggatattaGCCAGTGTAAGAATCACAGCTGACGTCATATT
TAGTACTTCTGATAAATGAAGTAGACCatatatagcggtcattaagtaag
ccattaaagattcgaacggcgggcggtattgaaagtttctatgactcaaa
tagtcataccANgtcattaagtaagccattaaagattcgaacggcgggtg
gtattgaaaggttctatgactcaaatagtcataccagcgctgagaaaact
aaggcgtcgtgcttcagagggctgaaatatcattaaccgccctggttata
gggcgataacgtcatttgcggcccgcttgGAACTTTatcgaagtcgttgc
attgaagcggcgagactaaaccgacgtcagaaaaaaaacactcttttgcA
TTGAAGTGAAAAGACTtggctgacgctagaaaaaacgttgtttgaatttc
cgatatggataataatagtaatagcgttaagctttcgttcgttgttgtca
ttaattctgccctttCAGTTTGATTATTAGCCCTCTAGTGCCATTTGCGC
CCTCCGCTTCGcgtcgggcccaaatgacactctcgggctaataatcaaac
tgcgcgggcagaaaataacaacaacgacctcaaactgaacgctattgtta
tattatattttttgaattgtgATTATGATATTATATTTTGTGATTTGATT
TCTCTACTACATATTTTTATTCACTCTCTTTATTCCCCCAATACCTATTC
CTCTTCTTGACCGCCCTTACGTTGACCTATTAAAGTAATTATCAATATAA
CTTAAAAATTATACAATTTTCCAAGACAATAATAATCATTTTATTATAGG
TGTTCCTATAGAATATTTTAACCAAAATGCTTGTCTCTCCCTAGTCAGAG
TATGAATGAAATCAGACAAAAATACTGAAGATGCAAAAAcattcaataat
tttcaaattgagGCCTAAGTGCAAAAATTCCAAGCTGCAAATGCTCATTT
GAAAACtatcttcaaaaaattgaagtcGATTTTAAGAAATCAATATAAGG
TCTGATAAAatatatatgaaaaataaaatcataattTCTTGTATCAGTCA
GGGAATCAGTCAATACAGTGTGCAAGTTCATTCTAAAGAGCAGaagattt
gaaaacaaaccATACCACAAACCATACCACAAATAccagaaaaaaacatt
tgatgTTTACGGTAACGGTTCATGTGTCTCTTATAAGGGCATGAGATGTA
AATGCTGTAAATCTAAACTTTATAGTATAGATTGCATCCATTTAAActta
aaataaaccagccgaggctggaaggtcagccaatagagcttagctagata
gctNNgattttccaaatatttgacaccccctccccccttgtacgcagaga
acaatagaaatgactttgtttaaacaatagatgtacgcttttgctaaacc
cctctccccccttcactgtgtacgtactatatggattgCCCCTCCAGTCT
GGGTAACCATCAGTAAccatcaagttacacaacatgcacacaaccatctt
gaagactttgctggtcacaaataataatcaaaagcaaaacttaaaattca
taactatgcggggaagctcatttttcccccgttttgctttaaactcgctt
ttgattggtctatgaatttgggcgattgatttaccgccttggcggaataa
acacacaaccatataaataaattcaacagggcagcggtgtagcaattaat
ttcaactgggagtcctctcttctgaaGAAGACCAGATTAATCTGTTTtat
tatggctgtgcaagttgtgacgagagtgtgcatgttgtgtaacttgacgg
cagcCCGCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTTTACTGTAACGGTTCATGTGTCTCTTATAAGGGCATGAGATGCA
AATGCTGTAAATCTCAACTTTATAGTATAGATTGCATCCatttaaacttt
aaaaagtggcattaaaatgttaatgtttttaaaacGTCATCATAGTTTAC
AACGGGTTCAACAACGAATTTTCCAAATACTGCAAATACATATGGATTAA
ATCCATTTTTCGATTGATTCAAATGGTTGCATCTCTTAAAATGTTATCTC
CAGCTGTTTACGTTTGTAGCCCGTAGTTGTTAAAGCTTGAGTTGCGTCCA
ATCTGTTTCCAATCTTTTCATAGCCATCCTGTAAAATAGAACAAAAATTC
gttatttttagtttgacaacAGTATTAGTACAttgattTTTATTTGATAA
CAGTGTAACAGATTTATCAGGGACACACCAATAAATTTATTGCTCTCAAA
TTTGCAGGCTTGAATGCAGGCGTCCTGCCAATTCAGTtaatatttgaata
aaatttgtgTGGGATGGAATGATGCTAAGGGGTATTTCAGAACTATATAC
TGTATATAGAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
GGGGTATTTCAGAACTATATACTGTATATAGAATTTCTAAACTTTAGAAC
CCCAGCAAAGTACGATGCTAGCAGCATTTTTGACATTATTTATTATGTTC
CAGCTTTGAATTTCCATAAAGCGCAAAAAGAAACTCGTCAAACCTTCGTA
GTACCAAACCAACACGTCAATTCTGCAAAATTAGCATCATGTTTAATAAC
CCCTACTGTACACTATACCCAGTATACAGTCAGACAGTTCAAAGATCAAA
GAGATAAACAAACAGGTTAAAAATTACTTACTTTTTTATCAACTCCGCTA
ACTTGCCAGTGCAAAATGCATGAACCCAGATCAGAAGAATGGATGCAGTG
GCGTGGATGGATGATGAGTGCTGTAAATAGTTCTATAACTGTTTAAACTT
TAAAGTGAAGCAAGGGGTTTGTCTCTTGTAATCCAGACTTCGTGTTTGCA
TATATCCTCCTCAGCGCTCAAAACAAAAAGTCCAAGTGGATGCCACTCAA
AATATCCAAGATCTCTCAGTCTTTCTTTACCCATCAATTTTCTGTATTCC
TTCTTTATATCCAGTTTCTGGTTTAGATTTGAACATGATTCaagcaattt
tgaaattaaattttttcaagaagttcCAAACTTTGGTTTCTGCCAGGCAC
CAGCGGAGGTGAATGAGGCAAAAACAGCTTAGCAACGACGTCATTTCAGC
aagattttcaaatcaaatgaatggGGCTTCTAGGCCATGAATGGGTGTGA
ATCCCATTTGATTCTTTCAAGAAACCCTTTATCTATCACCAGTTGACCAT
TCATTTCCATTCATTCAAAATAAGCCAAGATCCAGGTCCATCTCTGACga
caacaaattcaaaataaaagccTGTCGGGTTTTGAAAGGTGCAAGTGTCG
GATGACTTGTCTCGATGAATGTAAAGTTTGAGATTGATTCCTTTTGGATG
TTGGTACATGAATGATATTCAAATTCACCAATTAAAACCCCATAGTGATA
ACATAAGCACGAAGAAAGATATATCAGCTTCTTTGGTTGTTATGCAAGCC
ATGTCGGGAAAAAAACTTTCGACGCCATGttgaaaatcaccaaaattcaa
atttttggcgGCAACGCGCTCTCTGCAAAAAGGAAAAAGCCGCGCTTTCT
TTTTGAAACAATGAGTTCTCCGTCCAGTCGTTAGAAGTTCATGGCGGTCT
ATATcctaaggcttcactttttcttgcctgggaaaggctAATGATTCCCT
TCTAGCGCTTTgggcttttacttcattggGTGTGACATTTTTGTGCTCGA
TTTCAATGCAATCATATTCcgaaattcatatttttctaGGTCAGGGGAAC
GCGAAGACGGATCAGTCCGAAGTATTCCGAAAAAGAGATAACGAATCTGG
TAGATTGACCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030624XLOC_030624Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048108-exon-scaffold_140-1491911889:216806..216884TCONS_00048108-exon-scaffold_140-1491911889:216806..216884Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1510915933:216806..216884TCONS_00048108-exon-scaffold_140-1510915933:216806..216884Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1575043694:216806..216884TCONS_00048108-exon-scaffold_140-1575043694:216806..216884Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1491911889:228791..229066TCONS_00048108-exon-scaffold_140-1491911889:228791..229066Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1510915933:228791..229066TCONS_00048108-exon-scaffold_140-1510915933:228791..229066Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1575043694:228791..229066TCONS_00048108-exon-scaffold_140-1575043694:228791..229066Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1491911889:230341..230489TCONS_00048108-exon-scaffold_140-1491911889:230341..230489Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1510915933:230341..230489TCONS_00048108-exon-scaffold_140-1510915933:230341..230489Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1575043694:230341..230489TCONS_00048108-exon-scaffold_140-1575043694:230341..230489Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1491911889:230807..231038TCONS_00048108-exon-scaffold_140-1491911889:230807..231038Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1510915933:230807..231038TCONS_00048108-exon-scaffold_140-1510915933:230807..231038Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1575043694:230807..231038TCONS_00048108-exon-scaffold_140-1575043694:230807..231038Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1491911889:237445..237518TCONS_00048108-exon-scaffold_140-1491911889:237445..237518Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1510915933:237445..237518TCONS_00048108-exon-scaffold_140-1510915933:237445..237518Clytia hemisphaericaexon
TCONS_00048108-exon-scaffold_140-1575043694:237445..237518TCONS_00048108-exon-scaffold_140-1575043694:237445..237518Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_140supercontigscaffold_140:216806..237518 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.43606	2.06632	0.310863	0.654047	1.9081	0.377438	1.13137	0.729707	0.409124	0.517747	1.27431	0.755921	0.69328	1.69291	0.226994	1.04229	0.790137	0.681125	0.257803	0.51856	0.210931	0.50329	1.05763	1.70701	1.17865	1.77914	0.910863	0.101174	0.483818	1.14706
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048108 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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