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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048255 ID=TCONS_00048255|Name=TCONS_00048255|organism=Clytia hemisphaerica|type=transcript|length=963bp
CGTAGGAAGAATAGAAAAGAATGGAATTTATAATTTCTTTACAAAAGAGG
GTTTTGAACGTCAATAAAAGTACGAAAATAACGAAGTTTTATTTACCTAT
TTACAAACAAAGATATCTACAGCAATCAAGGGGTATTAAATCTAAAGGTT
TAAATCATtaagaataaaaatatataactaaaaaaacaaaaacaaattgc
aACGAAAATGATTTAAAACCGAATATAAGCTAGATGCACTTTGCAGAGTC
TTTATTTGGCAATTCTTGATCTCATACCAGCATAATACAGAATATTAATT
TTTGGACATTAAGTCCctgcgaaatcttaaaatttcgcagaTGAGCTCAA
AGTCGGGGATTTAATCTCCGCAAAATTTTATCCCTATATCcatataattt
tattttatattttatatatatttaaatGTTTTAGAATACTTTTGTACACC
ACAagaagtttttgatattttataatCTTATGAAGATGTGCTTGATGATC
GTTGCTTTGAAAGTGACGATCGGCTGTTCAATGAAGACAGGGACGATGAT
GAAGATGCCGCTCCCGATATCGATGTTGAGCGCTGGCGATTCCGACTTGC
ATCTTGATTTACCAAAGGTCCTTTTGTGCTGTTCACGTTGACTCTTGATG
TAAGACAATAAGCACTACCATTTGGAATGGAACTCAAAGACGGTGTACGA
CTTACTTTTCGTGTACCGCTATTCATCTTTTGAGTGATTTGAAAATGTAT
GAACAGAGATTAGAATATAATGAATGTGTGTCGAAACAAGCAAAACCAAA
ACTGTCTTTTCTGTTCGACAGTCAATCGTAAAATGTCTGGAACTTTCCCC
AAGTGCCAAAGTTATGGTCTTTCAacaattgtttttttctttttcactct
AAGATGATAAAAGCATACTGTTAAACCCTCTGAAAGTGATCATATTATAA
ACAGTTCAACAAC Run BLAST on NCBI transcript from alignment at scaffold_141:459917..460879 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048255 ID=TCONS_00048255|Name=TCONS_00048255|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at scaffold_141:459917..460879 (Clytia hemisphaerica)
GTTGTTGAACTGTTTATAATATGATCACTTTCAGAGGGTTTAACAGTATG
CTTTTATCATCTTagagtgaaaaagaaaaaaacaattgtTGAAAGACCAT
AACTTTGGCACTTGGGGAAAGTTCCAGACATTTTACGATTGACTGTCGAA
CAGAAAAGACAGTTTTGGTTTTGCTTGTTTCGACACACATTCATTATATT
CTAATCTCTGTTCATACATTTTCAAATCACTCAAAAGATGAATAGCGGTA
CACGAAAAGTAAGTCGTACACCGTCTTTGAGTTCCATTCCAAATGGTAGT
GCTTATTGTCTTACATCAAGAGTCAACGTGAACAGCACAAAAGGACCTTT
GGTAAATCAAGATGCAAGTCGGAATCGCCAGCGCTCAACATCGATATCGG
GAGCGGCATCTTCATCATCGTCCCTGTCTTCATTGAACAGCCGATCGTCA
CTTTCAAAGCAACGATCATCAAGCACATCTTCATAAGattataaaatatc
aaaaacttctTGTGGTGTACAAAAGTATTCTAAAACatttaaatatatat
aaaatataaaataaaattatatgGATATAGGGATAAAATTTTGCGGAGAT
TAAATCCCCGACTTTGAGCTCAtctgcgaaattttaagatttcgcagGGA
CTTAATGTCCAAAAATTAATATTCTGTATTATGCTGGTATGAGATCAAGA
ATTGCCAAATAAAGACTCTGCAAAGTGCATCTAGCTTATATTCGGTTTTA
AATCATTTTCGTtgcaatttgtttttgtttttttagttatatatttttat
tcttaATGATTTAAACCTTTAGATTTAATACCCCTTGATTGCTGTAGATA
TCTTTGTTTGTAAATAGGTAAATAAAACTTCGTTATTTTCGTACTTTTAT
TGACGTTCAAAACCCTCTTTTGTAAAGAAATTATAAATTCCATTCTTTTC
TATTCTTCCTACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048255-exon-scaffold_141-1491911889:459917..460879 | TCONS_00048255-exon-scaffold_141-1491911889:459917..460879 | Clytia hemisphaerica | exon |
| TCONS_00048255-exon-scaffold_141-1510915933:459917..460879 | TCONS_00048255-exon-scaffold_141-1510915933:459917..460879 | Clytia hemisphaerica | exon |
| TCONS_00048255-exon-scaffold_141-1575043694:459917..460879 | TCONS_00048255-exon-scaffold_141-1575043694:459917..460879 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_141 | supercontig | scaffold_141:459917..460879 . |
Blast
The following BLAST results are available for this feature:
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