TCONS_00048215 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048215
Unique NameTCONS_00048215
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048215 ID=TCONS_00048215|Name=TCONS_00048215|organism=Clytia hemisphaerica|type=transcript|length=1338bp
CTTCCAGGCTATCGTTCGATTTAAAAACATTGCTGCATCAGCGTGATTTT
ACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGATAGTCACGTCCTGTA
CTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGAATCAACCATCAAGA
TGCCATTCCTGAGTGATGAACAACAATCCAATTTGGCTAAGGTAGCTAAA
TCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCTGATGAGAGCACAGG
AACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGAAAATACTGAAGAAA
ACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTGAAAAAAGCTTAGGA
AGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACTCTGTATCAAAAAGA
TGACAACGGCAAACCATTTGTTGAACTTATCAAAGAAATGGGAGCCAATC
CTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGCATGGAACCAACAAT
GAAGGAACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATA
CCATGAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCA
ACACCCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAA
GTATTGGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCAT
TGTTGAACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCC
TTCGTGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGAC
CATCATGTTTATTTGGAAGGCACTCTGTTGAAACCAAACATGGTTACTCC
AGGAAATTCGTGCTCAAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTA
CTGTGACCGCCCTTCGAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACC
TTCCTTTCTGGTGGACAGTCTGAATTAGAAGCTACTGCTAACTTGAACGC
CATGAACAAAGTGGATTTACTCCGACCATGGTCACTTACTTTCTCCTACG
GACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCAGGAAAACCTGAA
AACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAGCTAAAATGAACAG
TCTGGCTTGCCGTGGATTGTACGAGGATGTCATGACGGATTCATTATGGA
GTGTACATGGACTTCCGGCAGGAAAGTATATTTCTTTGTTAATTTATtct
tgaattttattttcatctgTTCTTTACCTTAAGACGTAAGTCAAACCAAC
GATTTTCACGAAGACTATCTAGCTCGTAGGTGTATGTA
Run BLAST on NCBI

protein sequence of TCONS_00048215-protein

>TCONS_00048215-protein ID=TCONS_00048215-protein|Name=TCONS_00048215-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
SRLSFDLKTLLHQRDFTSAAHSLALAADSHVLYFRCLSSTFYFEESTIKM
PFLSDEQQSNLAKVAKSICAPGKGILAADESTGTIGKRFAGIGVENTEEN
RRLYRQLLFTGEKSLGSCLGGVILYEETLYQKDDNGKPFVELIKEMGANP
GIKVDKGIVPLHGTNNEGTTQGLDGLADRCKKYHEAGATFAKWRCVIKIN
TPVGVPTDTAIQENVQVLARYASICQANGLVPIVEPEILIDGEHDLATSL
RVTERVLACVYKTLVDHHVYLEGTLLKPNMVTPGNSCSKKATAEEIGLAT
VTALRRTVPACMPGVTFLSGGQSELEATANLNAMNKVDLLRPWSLTFSYG
RALQASVLKAWAGKPENVAEAQKVLLHRAKMNSLACRGLYEDVMTDSLWS
VHGLPAGKYISLLIYS
Run BLAST on NCBI

transcript from alignment at scaffold_141:514092..522024-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048215 ID=TCONS_00048215|Name=TCONS_00048215|organism=Clytia hemisphaerica|type=transcript|length=7933bp|location=Sequence derived from alignment at scaffold_141:514092..522024- (Clytia hemisphaerica)
CTTCCAGGCTATCGTTCGATTTAAAAACATTGCTGCATCAGCGTGATTTT
ACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGATAGTCACGTCCTGTA
CTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGAATCAACCATCAAGA
TGCCATTCCTGAGTGATGAACAACAATCCAATTTGGCTAAGGTAGCTAAA
TCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCTGATGAGAGCACAGG
AACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGAAAATACTGAAGAAA
ACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTGAAAAAAGCTTAGGA
AGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACTCTGTATCAAAAAGA
TGACAACGGCAAACCATTTGTTGAACTTATCAAAGAAATGGGAGCCAATC
CTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGCATGGTATGCTCTCT
TTTTTTAAATATTTGGCAAAAGTCATGACAAAACAAGGGCACTAGGAGAT
TGCATAGGGATAGTATCTTCTTTTAAGGTATCCGACGTGATGACAGGGTT
GGAAATTTACAGCTACTCAGACCTTTGTTTTGCTGCAATCTATTAAGAAG
GTATATAAGCTTAAAAAGGAAGGAAAGCATAAAAAGTCTACAAGGAAAAT
ATTGTTTTTTACTTACATGGGAACTGCTTGCTATCTACCGTAAGTTGGTC
TAATATCGACACCCCTCGTCTAATTCCGACACCCTTCTTTAGAGAAAGGA
ATAATATGAAAGCTTGAATCACTGATTGAAAAAGAATTATTCCTCTCTGA
CTAATAAGCAAAGAAAAACAGTTTCAACCTTTCTATAAATTTCAGCTGAT
AAAAAGGGTGTTGGAATTGGAGGAGGGGTGTCGACATTAGACCAAGTTAC
AGTATCTATCTATTTGGTTGAGTCGCAGGAGGCTTTTAAGGCCCATTCTT
GCAACTATAGATGCTTTCGATTAGCGCCCTGTCAGCACCTTGAACTGACT
ACCCAATTCCCCTCACATAGCATGGGTTGACCTGGGCAAAGGTTCATTCA
CTTGCCAAGTGAACCGCTATGAGTGGGAATCGAACCTCTGTTGCCTGTGT
AGCAACCAAGGTCAATGACGACTATACCACAACGCCTCTATACCACAGGG
CATCCACGACTATACCACAACGCCTCTATACCACAACGCCTCTCTATATT
TAAAGGGGAACTCAATAAATTTTTTATTTTTATTATTTTCCTGATGTTTG
GTAATATTAAGTATAAAAATGAGAAAGAAAGTATATAGGTTCGATCTCTC
AAATAAAAATCATGAAAAATCTCTCTTAACTTCAGTTAAAAATATGTTCA
AAAAGTCACCCCCTTTCTTTTTAAAAAAGATCGACTTCTCTTTGGATTAT
GACGTCAAAGTATTCAGAAAACAGAACAAATTCAGTTATGACTACAGTAT
GCTTTCAGAGTTCTGTTTTAAATAAGAAATAAATACATAGAAAAGTATTC
CTGGTAAATTGTGGGTGATTTAGCTNTACTTGGAATACTTGGAAATGCTT
TCGATGGTCTTCCATCTAGGTGAACAATCCAATGTCCGCCTGCCGATTAT
TGATTTGATGTTTGATTGAGTTGGATGTAGCATTTGTTGTTGCGCCTAGA
ACAGAAGGTTCATCTGGAACAGAAACAAGGAACTTGTCTAGCTTCTTTTT
TAATTCTAGCACAGGGCATCCACTTAAATTCCTCAATTCTTTAGGGAGGG
AGTTGATAAGAAATTATGTCGGATTGACTGTAGGGCAACTAATGTTCCTG
TTATTCGGGCTTTCACAAAGCACAATCTTCCAAGTCTGGGTTGGAAAACA
GGTTGTAACCCGTCTGACTGGTTTATATTAGGCACAAGGTTTTCAAGGAT
CTTCCACGTGTAGATGATCATGTATCTTTCACGTCTTCTTTCTAGCGAAT
AAAGCTTGAATGCCTTCAATCTTGACCAGCATGATTTTTCGGGGTGAATG
ATTTTTCGAATGAAGCTCCACTGGACCATTTCAAGAACAATGTTGCTGTG
GAGCCATAGGTTGGTACGTTGTCACAGGGGATTGTTGATTTGTTGATATC
TGGCTCATTATGTAAGAGAACTTTGTGTCCATTACCTTCATTATCTCTTC
TTTCAGAAGGTGGACTGATTCTAAAAAAGTTGGGTCCTTGTTGGTCGCCT
CAGGTTTGGGCTTCTCTTTTTTTGTCCATCTTAAATGCATGAGATTACAG
TCTTTTTGGTAGCAGCAGCCTTTGGTAATTGAAGTTGAGCACATTTTAGG
ATGGAAGTCTTGACATTGTTTTCCTTTATTGCATCCTCTGGGGGCTCGAG
TTCCATGTGAAAGTAGCTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTTGTCATTGCCTTTGGGTG
AATTTGGTGCAGTTTGTTCAATTTGATCGTCCTTGGGATGGTCTGGTGCA
GATGTCTTTTTGCGGGTTTCTTTGGGAAAGTCTAGTGCAGGTATTTCTGT
TAAGTCCTCGTCAAGGAGATTGATTTGATCAATATTCTCAAGATCTGGAT
AGATTCTTTCTATTTGTCGATTTGGAACATCTGGTATTGGTTGGTAGGGT
AAGTTGGTGAATTGGTTTTGTCTTTGGGTTTCTGGAGGGCTGCTTAATTC
TGGCTGGGTAGATGGTGTAGAATCTTTATTCTTTATGAATCTTTTCTTTT
TTCCACAATCATCTTGTGGGATTTTGGTTAGTTCACAGGGTTGACAGACG
TAGTAAAGTCCCGGGAGATTGAAAGGGTTGAAAGTCTTTTTGAAGGAAGC
AGTGTCAAATTCCATTGTTGTTGCACCAAGGAGTTGAAGGTAGCATTTAC
GATGGACTTCTTGGCCACAAAAGACACATGCTAACAATGGAGTGTCTTCA
ATTTTGAAGCAATATGTCTCATTACATAATGAGTATTCGTCAGGAAGGAG
ATTTTGTAGTCTGCAAATTAGTGCATGGACATTTGCTGATTTTACATATT
GCTCTTGATTTTCGACTTTCAGGTAGGCTAAAGTTGATTCCAGAACAGGT
TTGTTGGATTTGCCAATGTCTTTAGTAAGTTGATCGAGGGATTTGCCATA
TTCATAACATCTAAGGCAAGACTTAACTTCATCATTTGGAGCAGAAATGC
AAAATTCAGCAATCAGATTCTCTGCAGCTTCAACCTTGTTTTGCCGTTCA
ACATTGTCAGACATAGTTACAAATAGGGTTGACGTATGGAGGTGAAAGTG
TAAGGATTGTTACCTGCTCAGCTGCACATGGAATTCCAAACTCTGTCATG
TGCAGCTGATCCTACAGTTTAAGAGTTGACAATCCTTTTGAAGCTTGTGG
GAATAACGTGTGCGGGGCAGGGATTCTTGTGCAATCAGAAGAAAGAAGAA
AAATTAGTCACTTAGCTGAATGGCTGCACTGTGGGGTGAGTGCAGCCTGA
TGTTGAAGCGTCAGAGTTTATTGTTCGATGAGGTGGTCTTCAGACTTTAC
ATACAAACAAGCCAAGGCAAGGTTGATTGTTGTTAATATCCACCAGTTGT
AGCTCGCCAAACATTTGATTTTGATTTTTTCTTCTTTAATTTTTCCTTTT
AATTTTTATTTTTCACTGAAAAATACTGGCCTCTCCCACGTGTTTCCACA
CAGGTTCAGCCTTATTCACTAATTCTTAATGGAGTGANGAAAAATACTGG
CCTCTCCCACGTGTTTCCACACAGGTTCAGCCTTATTCACTAATTTTTAA
TGGAGTGAATTTTTTTATCTGTTAAATAAGAAATAAATACATAGAAAAGT
ATTCCTGGTAAATTGTGGGTGATTTAGCTGAATAACAATAAAAAATCCAA
CAAGAAACAGAAAAAATTAGTCACAAACCCTCTACTGAAGGGCCTGTCTT
CACTGATTTTTAGCCTGAGAAGATAAGCATCTTCCTCTTTCTGAATGCAG
CTACGTCATAAAACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTTTATTTGATAAACAATTTCATTTTAGTA
GAGGGGAGCCTCTTTTTAAAAGCTCATTAAACAAATTTTTAGTGTGAAAG
GAGAGTTGCAACCTTGAAATTTTGAAATTTATCGTTGAAACAAACCATTT
CAGGATAGAAACAAAAAAATCCAAAATTTGTCGAGTTCCCCTTTAAGTAA
AGCTTTTGTTGTAACCGTTTATGAGATATTGTAAAATATTGACCTCTGTA
AGAAAGTCCATAGCTTGTGAAGGTAAGGTTTGACAGGCTGTTAGTCACAC
TAGGAAATCAAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTA
TTTGCAACAACAAGGATGAGAGTTACCTGAATCAAGTTCGCAAGACAATT
AATTAAAAATTGAAAGTTTGAAACAAAATAAAACGTGCAGTAGCCAAAAT
CAACCAACCAAAATTTGTCATTCAATTCCCTAGACAGCGCTTCGATTTTT
AAGGCCTTGTTTATATGCTAAAGTAAAAACAATTCTGCACATGTAAATGG
GTCAGTGTTTGGGTTCCCGCAGATCTTTTTCTTGGGAAGTTGATCTTCAA
ATGAGTTCTCAAGGTTGGCTTGGCTCAAATTTTTTCATCTATGGCTCAAA
TTTTAGGCAATTTCTCATACATAGTTTTTGAGAATGTTAATTTCATTAAA
AAGCACCGGGTTATTTTTAATGAATCCCTTTTATGCTTGAGAGTCAGGTA
AACAATATAGGGTTTTCCCAGCATTAATCTTTGATACATATTTCGGCGGG
ACGCTAGTGTGACTAACTGACAGAGATCAATAATTTATGGAATTGCCTGA
ACAAGCCAGTTAGTACAGTATATTGATTGTTACCCATGTTTATCTTTTTT
GTGTATAATGAACCCCTTCAATGTTTGCAGCCTACACAGTATTCTCATGA
ATGTACATAAAAATACTTCTTTGGATGTATAAATGAGTAGCTCAAAATGA
GTGCTATTGGATTACATTGATGTTAAACCTAGTTACTTGTCTTATATCTT
GAAAACAAAATAAGTCCATGTTTACGTTGTTTGGAAGTCAGATTTGATTG
TTCTTTGTTTGTTTGAAGAAAGATACATGTTGTGCTGGTAATTTTTTCTT
GAAGGTGATGTAAATGTTCTCAATTTGAAAGCGTGCAAGATTTATTTGAA
ATTAGAACAATATACTCTGAACATTCATTAAAAAAGATTTGGTTTCTTGT
TTTTTTATCCGTGTTATGTTATCTTTACAGCCAGTCAACAGACGATGATT
TTAGTTTGACCATTCTCGAATGGCTTTCAGTACTGATTATTATCTTTATT
ATACTCAGGAACCAACAATGAAGGAACCACGCAAGGATTGGATGGACTTG
CAGACAGGTGTAAGAAATACCATGAAGCTGGTGCTACTTTCGCCAAATGG
AGATGTGTTATCAAAATCAACACCCCAGTAGGTGTCCCTACCGATACTGC
TATCCAGGAGAATGTTCAAGTATTGGCCAGATACGCCAGCATTTGTCAAG
CTAACGGACTAGTCCCCATTGTTGAACCAGAGATTTTGATTGATGGAGAA
CACGACCTTGCAACCTCCCTTCGTGTTACTGAACGTGTCTTGGCTTGTGT
TTACAAAACTTTGGTAGACCATCATGTTTATTTGGAAGGCACTCTGTTGA
AACCAAACATGGTTACTCCAGGTCAGTATCAAAACAAAATTTTTATATTG
AAGCTCTTTTCTTCTGTGGCTTGGCAAGGAACAGTTTAGTTATTTTATCT
ACTCAATGGGGACAATTTTGTTTTCTGTTCTTTTTTCTAAAACGTTTGAG
TGTCGATTTTGTTTTCTTAGTTAGTTTCAAAGGNGACCATCATGTTTATT
TGGAAGGCACTCTGTTGAAACCAAACATGGTTACTCCAGGTCAGTATCAA
AACAAAATTTTTATATTGAAGCTCTTTTCTTCTGTGGCTTGGCAAGGAAC
AATTTTTTAAAGTTTTAAAGTTTTTAAAAGTTTCAACAATTTGTTTAGGA
AATTCGTGCTCAAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGT
GACCGCCCTTCGAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCC
TTTCTGGTGGACAGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATG
AACAAAGTGGATTGTAAGTAGATTTTTTATTATAAATTGTTTGTAGATGC
TTTGAATTCCATGAGTTGTGTTTAAAATCTATGACATACAGTACGTACCA
TTTCTGGGTATAAGGTATCTACTTTATTAATCAGTATTCCAGAGGGCAAG
ATAAGTTCTTCGTTTTTCTGTACGTTTATCTACAAAATCTCAGCAAACTT
TTTGAATATTTTAAATCAGTACAGTCCATGAAAAACTTTAATTATTTCCT
TCTTTTTTCGCAGTACTCCGACCATGGTCACTTACTTTCTCCTACGGACG
TGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCAGGAAAACCTGAAAACG
TTGCCGAGGCTCAAAAAGTCTTATTACATAGAGCTAAAATGAACAGTCTG
GCTTGCCGTGGATTGTACGAGGGTGAGGAAAAGAGCGCGGCCGCCGACGA
ATCGCTCTTTGTCGCCAACCATCAATATTAAAAAAGACATTTGCCCTCCC
TCTTGTGATAATTTAACTGAACTTATATCCTTAATAATAACAGTCTTTAA
ATCGAATTTTTGCGAAAATGTTAGTTAATGTATCTTATTTAAAGTATTAT
TATCTTATCTTGTCTTATTGAAATTTCTTTTGTCACTTTATCTGTATAAA
TAGTAGTATTTTTTTGTATTTTCGTTTTTAGTTGTTGTTTTTTTTTTGCA
CGCGACATTAACTGTATTTTGCTAGAATTCTTATATAAAGAGTATGAAAT
GATAAAACTGAAATTCATCAGAAATAAAGACTCATTTGTAAAAAATGGGG
CAACAGGTGTTGAAAGTTATGGATCATTTTTAAATTTTCAAATTTCAATG
TTCATAAAAAGAGTTTGGATTTTTTTTATGAAATTTTGAAAATACTAAAC
TAAGTTTTGAAACACCATTACACACTACTTTGAAGTTTTACTATCATTTG
CCAAATTTTCGGATATATTGAATTTGTTGGTGTCAACGTTGATTGGGCCT
GGGTATAACCTATATAAATTTTGAGAACTTTGTTTGGTATTTCTGGTCTT
TGAATTATTGATTATCACACGTGTAACATNCTGTATCCTATATAAATTTT
GAGAACTTTGTTTAGTATTTCTGGTCTTTGAATTATTTATCACACGTGTA
ACATTGCCATGGCAACTATGTTTAAGAAAAATCACACCTCCTGTCCATCT
CATTCATCTTTCATTTTCAAATTGACTGACGAAAAATCAGAAATTTCAAT
TCATCTGATTTCATCTTTTTGTGGAACTGCTCTTATGTAATGATTTCACT
TTTAAATAATTTTCTCATTAGATGTCATGACGGATTCATTATGGAGTGTA
CATGGACTTCCGGCAGGAAAGTATATTTCTTTGTTAATTTATTCTTGAAT
TTTATTTTCATCTGTTCTTTACCTTAAGACGTAAGTCAAACCAACGATTT
TCACGAAGACTATCTAGCTCGTAGGTGTATGTA

Coding sequence (CDS) from alignment at scaffold_141:514092..522024-

>TCONS_00048215 ID=TCONS_00048215|Name=TCONS_00048215|organism=Clytia hemisphaerica|type=CDS|length=7506bp|location=Sequence derived from alignment at scaffold_141:514092..522024- (Clytia hemisphaerica)
ATGTCATGACGGATTCATTATGGAGTGTACATGGACTTCCGGCAGGAAAG
TATATTTCTTTGTTAATTTATTCTTGATACTCCGACCATGGTCACTTACT
TTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCAGG
AAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAGCTA
AAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGAAATTCGTGCTCA
AAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGTGACCGCCCTTCG
AAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCCTTTCTGGTGGAC
AGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATGAACAAAGTGGAT
TGCACTCTGTTGAAACCAAACATGGTTACTCCAGGAACCAACAATGAAGG
AACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATACCATG
AAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCAACACC
CCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAAGTATT
GGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCATTGTTG
AACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCCTTCGT
GTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGACCATCA
TGTTTATTTGGAAGTCCAGGCTATCGTTCGATTTAAAAACATTGCTGCAT
CAGCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGATAG
TCACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGAAT
CAACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTTGGCT
AAGGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCTGA
TGAGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGAAA
ATACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTGAA
AAAAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACTCT
GTATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAAGAAA
TGGGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGCAT
GATGTCATGACGGATTCATTATGGAGTGTACATGGACTTCCGGCAGGAAA
GTATATTTCTTTGTTAATTTATTCTTGATACTCCGACCATGGTCACTTAC
TTTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCAG
GAAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAGCT
AAAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGAAATTCGTGCTC
AAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGTGACCGCCCTTC
GAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCCTTTCTGGTGGA
CAGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATGAACAAAGTGGA
TTGCACTCTGTTGAAACCAAACATGGTTACTCCAGGAACCAACAATGAAG
GAACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATACCAT
GAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCAACAC
CCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAAGTAT
TGGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCATTGTT
GAACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCCTTCG
TGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGACCATC
ATGTTTATTTGGAAGTCCAGGCTATCGTTCGATTTAAAAACATTGCTGCA
TCAGCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGATA
GTCACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGAA
TCAACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTTGGC
TAAGGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCTG
ATGAGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGAA
AATACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTGA
AAAAAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACTC
TGTATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAAGAA
ATGGGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGCA
TGATGTCATGACGGATTCATTATGGAGTGTACATGGACTTCCGGCAGGAA
AGTATATTTCTTTGTTAATTTATTCTTGATACTCCGACCATGGTCACTTA
CTTTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGCA
GGAAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAGC
TAAAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGAAATTCGTGCT
CAAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGTGACCGCCCTT
CGAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCCTTTCTGGTGG
ACAGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATGAACAAAGTGG
ATTGCACTCTGTTGAAACCAAACATGGTTACTCCAGGAACCAACAATGAA
GGAACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATACCA
TGAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCAACA
CCCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAAGTA
TTGGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCATTGT
TGAACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCCTTC
GTGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGACCAT
CATGTTTATTTGGAAGTCCAGGCTATCGTTCGATTTAAAAACATTGCTGC
ATCAGCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGAT
AGTCACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAGA
ATCAACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTTGG
CTAAGGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGCT
GATGAGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTGA
AAATACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGGTG
AAAAAAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAACT
CTGTATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAAGA
AATGGGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTGC
ATGATGTCATGACGGATTCATTATGGAGTGTACATGGACTTCCGGCAGGA
AAGTATATTTCTTTGTTAATTTATTCTTGATACTCCGACCATGGTCACTT
ACTTTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGGC
AGGAAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGAG
CTAAAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGAAATTCGTGC
TCAAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGTGACCGCCCT
TCGAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCCTTTCTGGTG
GACAGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATGAACAAAGTG
GATTGCACTCTGTTGAAACCAAACATGGTTACTCCAGGAACCAACAATGA
AGGAACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATACC
ATGAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCAAC
ACCCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAAGT
ATTGGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCATTG
TTGAACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCCTT
CGTGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGACCA
TCATGTTTATTTGGAAGTCCAGGCTATCGTTCGATTTAAAAACATTGCTG
CATCAGCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTGA
TAGTCACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAAG
AATCAACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTTG
GCTAAGGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTGC
TGATGAGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTTG
AAAATACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGGT
GAAAAAAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAAC
TCTGTATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAAG
AAATGGGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCTG
CATGATGTCATGACGGATTCATTATGGAGTGTACATGGACTTCCGGCAGG
AAAGTATATTTCTTTGTTAATTTATTCTTGATACTCCGACCATGGTCACT
TACTTTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGGG
CAGGAAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAGA
GCTAAAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGAAATTCGTG
CTCAAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGTGACCGCCC
TTCGAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCCTTTCTGGT
GGACAGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATGAACAAAGT
GGATTGCACTCTGTTGAAACCAAACATGGTTACTCCAGGAACCAACAATG
AAGGAACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATAC
CATGAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCAA
CACCCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAAG
TATTGGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCATT
GTTGAACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCCT
TCGTGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGACC
ATCATGTTTATTTGGAAGTCCAGGCTATCGTTCGATTTAAAAACATTGCT
GCATCAGCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCTG
ATAGTCACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGAA
GAATCAACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATTT
GGCTAAGGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCTG
CTGATGAGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGTT
GAAAATACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAGG
TGAAAAAAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAAA
CTCTGTATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAAA
GAAATGGGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTCT
GCATGATGTCATGACGGATTCATTATGGAGTGTACATGGACTTCCGGCAG
GAAAGTATATTTCTTTGTTAATTTATTCTTGATACTCCGACCATGGTCAC
TTACTTTCTCCTACGGACGTGCCCTTCAAGCAAGTGTATTGAAAGCATGG
GCAGGAAAACCTGAAAACGTTGCCGAGGCTCAAAAAGTCTTATTACATAG
AGCTAAAATGAACAGTCTGGCTTGCCGTGGATTGTACGAGGGAAATTCGT
GCTCAAAAAAAGCAACAGCTGAAGAGATTGGTTTAGCTACTGTGACCGCC
CTTCGAAGAACTGTTCCAGCCTGTATGCCAGGTGTCACCTTCCTTTCTGG
TGGACAGTCTGAATTAGAAGCTACTGCTAACTTGAACGCCATGAACAAAG
TGGATTGCACTCTGTTGAAACCAAACATGGTTACTCCAGGAACCAACAAT
GAAGGAACCACGCAAGGATTGGATGGACTTGCAGACAGGTGTAAGAAATA
CCATGAAGCTGGTGCTACTTTCGCCAAATGGAGATGTGTTATCAAAATCA
ACACCCCAGTAGGTGTCCCTACCGATACTGCTATCCAGGAGAATGTTCAA
GTATTGGCCAGATACGCCAGCATTTGTCAAGCTAACGGACTAGTCCCCAT
TGTTGAACCAGAGATTTTGATTGATGGAGAACACGACCTTGCAACCTCCC
TTCGTGTTACTGAACGTGTCTTGGCTTGTGTTTACAAAACTTTGGTAGAC
CATCATGTTTATTTGGAAGTCCAGGCTATCGTTCGATTTAAAAACATTGC
TGCATCAGCGTGATTTTACATCTGCTGCCCACTCGCTTGCGCTTGCTGCT
GATAGTCACGTCCTGTACTTTCGCTGTCTCAGTTCAACCTTCTACTTTGA
AGAATCAACCATCAAGATGCCATTCCTGAGTGATGAACAACAATCCAATT
TGGCTAAGGTAGCTAAATCCATTTGTGCACCAGGCAAAGGAATTTTAGCT
GCTGATGAGAGCACAGGAACAATTGGCAAAAGGTTTGCTGGGATAGGAGT
TGAAAATACTGAAGAAAACAGACGCTTGTACCGTCAGCTTTTATTCACAG
GTGAAAAAAGCTTAGGAAGCTGTTTAGGCGGTGTTATCTTGTATGAAGAA
ACTCTGTATCAAAAAGATGACAACGGCAAACCATTTGTTGAACTTATCAA
AGAAATGGGAGCCAATCCTGGTATCAAAGTAGACAAGGGAATTGTCCCTC
TGCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030684XLOC_030684Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048215-proteinTCONS_00048215-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048215-exon-scaffold_141-1575043694:521536..522024TCONS_00048215-exon-scaffold_141-1575043694:521536..522024Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1575043694:516087..516416TCONS_00048215-exon-scaffold_141-1575043694:516087..516416Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1575043694:515836..515868TCONS_00048215-exon-scaffold_141-1575043694:515836..515868Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1575043694:515562..515726TCONS_00048215-exon-scaffold_141-1575043694:515562..515726Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1575043694:515153..515311TCONS_00048215-exon-scaffold_141-1575043694:515153..515311Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1575043694:514092..514253TCONS_00048215-exon-scaffold_141-1575043694:514092..514253Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1510915933:521536..522024TCONS_00048215-exon-scaffold_141-1510915933:521536..522024Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1510915933:516087..516416TCONS_00048215-exon-scaffold_141-1510915933:516087..516416Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1510915933:515836..515868TCONS_00048215-exon-scaffold_141-1510915933:515836..515868Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1510915933:515562..515726TCONS_00048215-exon-scaffold_141-1510915933:515562..515726Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1510915933:515153..515311TCONS_00048215-exon-scaffold_141-1510915933:515153..515311Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1510915933:514092..514253TCONS_00048215-exon-scaffold_141-1510915933:514092..514253Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1491911889:521536..522024TCONS_00048215-exon-scaffold_141-1491911889:521536..522024Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1491911889:516087..516416TCONS_00048215-exon-scaffold_141-1491911889:516087..516416Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1491911889:515836..515868TCONS_00048215-exon-scaffold_141-1491911889:515836..515868Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1491911889:515562..515726TCONS_00048215-exon-scaffold_141-1491911889:515562..515726Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1491911889:515153..515311TCONS_00048215-exon-scaffold_141-1491911889:515153..515311Clytia hemisphaericaexon
TCONS_00048215-exon-scaffold_141-1491911889:514092..514253TCONS_00048215-exon-scaffold_141-1491911889:514092..514253Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_141supercontigscaffold_141:514092..522024 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
443.603	509.212	382.21	284.491	88.6374	88.6104	76.391	95.1535	249.709	222.34	363.152	236.232	205.482	195.013	187.729	175.208	183.241	174.546	98.0968	116.634	219.013	186.487	250.562	291.37	148.672	179.6	105.957	145.521	136.661	127.04
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000741FBA_I
IPR029768Aldolase_I_AS
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004332fructose-bisphosphate aldolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006096 glycolytic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004332 fructose-bisphosphate aldolase activity
Blast
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BLAST of TCONS_00048215 vs. Swiss-Prot (Human)
Match: ALDOA (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 460.685 bits (1184), Expect = 5.689e-160
Identity = 223/342 (65.20%), Postives = 264/342 (77.19%), Query Frame = 3 
Query:  147 KMPFLSDEQQSNLAKVAKSICAPGKGILAADESTGTIGKRFAGIGVENTEENRRLYRQLLFTGEKSLGSCLGGVILYEETLYQKDDNGKPFVELIKEMGANPGIKVDKGIVPLHGTNNEGTTQGLDGLADRCKKYHEAGATFAKWRCVIKINTPVGVPTDTAIQENVQVLARYASICQANGLVPIVEPEILIDGEHDLATSLRVTERVLACVYKTLVDHHVYLEGTLLKPNMVTPGNSCSKKATAEEIGLATVTALRRTVPACMPGVTFLSGGQSELEATANLNAMNKVDLLRPWSLTFSYGRALQASVLKAWAGKPENVAEAQKVLLHRAKMNSLACRGLY 1172
            + P L+ EQ+  L+ +A  I APGKGILAADESTG+I KR   IG ENTEENRR YRQLL T +  +  C+GGVIL+ ETLYQK D+G+PF ++IK  G   GIKVDKG+VPL GTN E TTQGLDGL++RC +Y + GA FAKWRCV+KI      P+  AI EN  VLARYASICQ NG+VPIVEPEIL DG+HDL     VTE+VLA VYK L DHH+YLEGTLLKPNMVTPG++C++K + EEI +ATVTALRRTVP  + G+TFLSGGQSE EA+ NLNA+NK  LL+PW+LTFSYGRALQAS LKAW GK EN+  AQ+  + RA  NSLAC+G Y
Sbjct:    4 QYPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGE--HTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKY 343
The following BLAST results are available for this feature:
BLAST of TCONS_00048215 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALDOA5.689e-16065.20Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
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