TCONS_00048260 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048260
Unique NameTCONS_00048260
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048260 ID=TCONS_00048260|Name=TCONS_00048260|organism=Clytia hemisphaerica|type=transcript|length=101bp
TTTGTTTATGACAATTTCACGGTTTCTTTATTGTTGAACAAAATATAcat
ttaaaatttacaaaactgTCCCGCTTCCTAAAAAACAGAATCTTTaaata
c
Run BLAST on NCBI

transcript from alignment at scaffold_141:539829..539929

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048260 ID=TCONS_00048260|Name=TCONS_00048260|organism=Clytia hemisphaerica|type=transcript|length=101bp|location=Sequence derived from alignment at scaffold_141:539829..539929 (Clytia hemisphaerica)
gtatttAAAGATTCTGTTTTTTAGGAAGCGGGAcagttttgtaaatttta
aatgTATATTTTGTTCAACAATAAAGAAACCGTGAAATTGTCATAAACAA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030722XLOC_030722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048260-exon-scaffold_141-1491911889:539829..539929TCONS_00048260-exon-scaffold_141-1491911889:539829..539929Clytia hemisphaericaexon
TCONS_00048260-exon-scaffold_141-1510915933:539829..539929TCONS_00048260-exon-scaffold_141-1510915933:539829..539929Clytia hemisphaericaexon
TCONS_00048260-exon-scaffold_141-1575043694:539829..539929TCONS_00048260-exon-scaffold_141-1575043694:539829..539929Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_141supercontigscaffold_141:539829..539929 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048260 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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