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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048262 ID=TCONS_00048262|Name=TCONS_00048262|organism=Clytia hemisphaerica|type=transcript|length=779bp
ttttgtgatTATATTGATTATATTCTATTTTATTGTATTATGATTGTTCC
TTCCTATCTAGACCTTTaatgttttaaataaaaaattcaatgacCTGTTG
TTGGAATGAAGGTGAGTGAAACAATTATCTGCCACACTCCCCTTTGTTAT
TTTGAAGTATAATTTATGAGTATTCTTCTgtcagaaaaatgtttttgttt
acattgCCATTATTGAATGCCATCCTATCCTTTCCTATCCATTCAAAAAA
GGCTAAGCTTATGGACCCCcatttcaaaagaagcaaaaattttaacttta
ttttttagGACTATGAGTTTTATTCCTTGGAGGACTTATAGCTTTTGTGA
ATTGGAATAGGATGGTTCCAAGGAAAAGCAGCAGTGcaaaattctagaaa
aaaacTTGATAAAACTTGTCTTATAACTTTAACAATATATGATAACATGT
TTTTTAGGATTATAAACCTCTTTACAATCATTATCTGCCCAAAAGgGGTC
CAAGCTTTGCTATTTACTATCTATATGGAACATTGGTGATTAATGGAACA
TTTGCTATTGGTACCTTTGCGTATGGATGTTATGATAAAGAATTCAGGAA
ACAACTGATCGATACTGTCCCTATAACCAAACCTGTTTTTGAATTTCTCA
CTGGACCTTTCAAAAATTAACATAAATATTTTCGTAGCTTttagatatat
atttttaaaggaTTTTGTATATAGATTTTATACATAGGCGATTATTTCAA
TTGAATACAACTCGATAATAgcttttcat Run BLAST on NCBI transcript from alignment at scaffold_142:29284..30350+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048262 ID=TCONS_00048262|Name=TCONS_00048262|organism=Clytia hemisphaerica|type=transcript|length=1067bp|location=Sequence derived from alignment at scaffold_142:29284..30350+ (Clytia hemisphaerica)
ttttgtgatTATATTGATTATATTCTATTTTATTGTATTATGATTGTTCC
TTCCTATCTAGACCTTTaatgttttaaataaaaaattcaatgacCTGTTG
TTGGAATGAAGGTGAGTGAAACAATTATCTGCCACACTCCCCTTTGTTAT
TTTGAAGTATAATTTATGAGTATTCTTCTgtcagaaaaatgtttttgttt
acattgCCATTATTGAATGCCATCCTATCCTTTCCTATCCATTCAAAAAA
GGCTAAGCTTATGGACCCCcatttcaaaagaagcaaaaattttaacttta
ttttttagGACTATGAGTTTTATTCCTTGGAGGACTTATAGCTTTTGTGA
ATTGGAATAGGATGGTTCCAAGGAAAAGCAGCAGTGcaaaattctagaaa
aaaacTTGATAAAACTTGTCTTATAACTTTAACAATATATGATAACATGT
TTTTTAGGATTATAAACCTCTTTACAATCATTATCTGCCCAAAAGGTTAG
TTTGCTTTACTTGACAAAGTTTTACGAAGAACCCTTCAAAAATGTAAGAA
ACAATAGATTGAAATAAGAGCTAAATTCATTGGCCAATTTTATGAGTAAT
AAATAAGGTAcatttaaaataatttcaacaaatttttttcgTCCAAAAGC
TTTTCATTATATACTTTACATGTTTTACAGGAGGCTTTATATATAAAGTA
CTTGATAATTGTATggttattttaaattatttttacctCAAGAAACTTTA
AATTATATAAtctgatatttctttgttttttaggGGTCCAAGCTTTGCTA
TTTACTATCTATATGGAACATTGGTGATTAATGGAACATTTGCTATTGGT
ACCTTTGCGTATGGATGTTATGATAAAGAATTCAGGAAACAACTGATCGA
TACTGTCCCTATAACCAAACCTGTTTTTGAATTTCTCACTGGACCTTTCA
AAAATTAACATAAATATTTTCGTAGCTTttagatatatatttttaaagga
TTTTGTATATAGATTTTATACATAGGCGATTATTTCAATTGAATACAACT
CGATAATAgcttttcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048262-exon-scaffold_142-1491911889:29284..29778 | TCONS_00048262-exon-scaffold_142-1491911889:29284..29778 | Clytia hemisphaerica | exon |
| TCONS_00048262-exon-scaffold_142-1510915933:29284..29778 | TCONS_00048262-exon-scaffold_142-1510915933:29284..29778 | Clytia hemisphaerica | exon |
| TCONS_00048262-exon-scaffold_142-1575043694:29284..29778 | TCONS_00048262-exon-scaffold_142-1575043694:29284..29778 | Clytia hemisphaerica | exon |
| TCONS_00048262-exon-scaffold_142-1491911889:30067..30350 | TCONS_00048262-exon-scaffold_142-1491911889:30067..30350 | Clytia hemisphaerica | exon |
| TCONS_00048262-exon-scaffold_142-1510915933:30067..30350 | TCONS_00048262-exon-scaffold_142-1510915933:30067..30350 | Clytia hemisphaerica | exon |
| TCONS_00048262-exon-scaffold_142-1575043694:30067..30350 | TCONS_00048262-exon-scaffold_142-1575043694:30067..30350 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_142 | supercontig | scaffold_142:29284..30350 + |
Blast
The following BLAST results are available for this feature:
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